Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq3969 113 5e-20
>seq3969
Length=6340
Score = 113 bits (124), Expect = 5e-20
Identities = 285/426 (67%), Gaps = 22/426 (5%)
Strand=Plus/Plus
Query 9143 CAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCG 9202
|| ||||| ||| || || |||||| || ||| | || | || ||| ||||| ||
Sbjct 1606 CAGGATCTGCTCACGACCACGAACATCCGGCAGACCAACCACTACCTGACGGTCAAAACG 1665
Query 9203 ACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAAC 9262
|| ||||| || | || ||||| | ||| || || || ||||| || || |
Sbjct 1666 GCCCGGACGCAGCAATGCAGGGTCAAGCACGTCAGGACGGTTGGTGGCGGCAATCACGAT 1725
Query 9263 AATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTG 9319
||| ||| ||||| ||||||||||||||||| || | ||||| | |||||
Sbjct 1726 AATGCCT---TCATTGCCTTCAAAACCATCCATCTCAACCAGCATCTGGTTCAGGGTTTG 1782
Query 9320 TTCCCGTTCATCAT-TCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAA 9378
||| |||||||||| | || | ||| |||| ||||| || |||||||| |
Sbjct 1783 TTCACGTTCATCATGACCACCGCCCA-GACCCGCACCACGTTGGCGACCGACGGCATCGA 1841
Query 9379 TCTCATCAATGAAGACAATACATGG------TTGATTTTCGCGGGCGATTTCAAAGAGAT 9432
| ||||||||||||| ||||| || || ||||||| || || || | |
Sbjct 1842 TTTCATCAATGAAGATGATACAAGGCGCGGCTT--TTTTCGCCTGC----TCGAACATGT 1895
Query 9433 CGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATT 9492
| || || | || || ||||| || |||||||| ||||||| | ||||| ||
Sbjct 1896 CACGCACACGAGATGCACCGACACCCACGAACATCTCAACAAAGTCAGAACCGGAA-ATG 1954
Query 9493 G-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTA 9551
| || || || || || | |||||| ||||| || ||| || || |||||||| ||
Sbjct 1955 GTGAAAAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGGGTCTTACCTGTT 2014
Query 9552 CCTGGC 9557
|| |||
Sbjct 2015 CCCGGC 2020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589858843593880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |