Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq13965 93.3 1e-14 >seq13965 Length=1093 Score = 93.3 bits (102), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 19861 TCGTTGATGAGCTGGCGCAGCAGCACTTCGCGATAAGCGTTCTCCTGCAACGATCGCGTC 19920 |||||||| || |||||| ||||| |||||| || || || |||| ||||| ||| Sbjct 514 TCGTTGATTCGCCGGCGCAACAGCAATTCGCGGTAGGCCATCGCCTGGG-CGATCACGTT 456 Query 19921 -AGCGGTTCGGATTCGAGAGCGAGCGTCGCGGCGATCTCGGCACGTTGGTCGGCCGGGTA 19979 ||||| ||||| || || | || | ||||| | | || | ||||| || || | Sbjct 455 GAGCGGCTCGGACTCCAGCGACAGGGCGGCGGCAACCGATGCCTGCTGGTCAGCAGGAAA 396 Query 19980 CAGGGAAATGAGCCGCGCCTTGCGTTCAGCAAAGACCGTTTCGAAGTCGAGCGGGTCGAC 20039 || || | | ||||||| ||| | | || ||| ||||||||||| || |||| Sbjct 395 GGCGGCGATCATCACCGCCTTGACGTCAACGAGGATCGTCTCGAAGTCGAGTGGCTCGAT 336 Query 20040 GATATCGGGCGCCGGCAGTTGCGACAGGTCGATCG 20074 ||| | |||| ||||| ||||||||||| |||| Sbjct 335 GATCTGCGGCGATGGCAGCTGCGACAGGTCAATCG 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129628938874098