Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 2e-12 >seq4 Length=5636934 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953 || || ||| | || || || || ||||| |||||||| || |||||||||| || ||| Sbjct 2144112 GCTTATAGACTTGCGCTGCAAACCAGAGAACAGCATATAAGACGAGACAAAGCGACAAGT 2144053 Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCAT 154013 || || ||||||||||| || || | ||||||||||| | | | | ||| | ||||| Sbjct 2144052 AATATATGCACAGCTCAAGCGTTGTTAGCTAATATGTCGGCAATGTTTGCCGTTTATCAC 2143993 Query 154014 GGT 154016 ||| Sbjct 2143992 GGT 2143990 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347 || |||||||||||| |||| | | ||||| ||||| ||| |||| |||||| ||| Sbjct 2147436 TATACTCCCTATCAACCTGAAGTTGCACAGGGTAGATTAGAAAGTTTACTCAATTTTCAA 2147377 Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407 || | || || || | ||||| | | ||||||| || || || ||||| |||| Sbjct 2147376 ACAATGATAACCGACTTGACAGGCCTTCATGTAGCAAATGCTTCCCTGTTAGACGAAGGT 2147317 Query 153408 ACTGCAGCAGCAGAAGC 153424 ||| ||||||||||||| Sbjct 2147316 ACTTCAGCAGCAGAAGC 2147300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579093069474080