Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq4 89.7 6e-13
>seq4
Length=5636934
Score = 89.7 bits (98), Expect = 6e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 157963 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 158022
|| |||||||||||| |||| | | ||||| ||||| ||| |||| |||||| |||
Sbjct 2147436 TATACTCCCTATCAACCTGAAGTTGCACAGGGTAGATTAGAAAGTTTACTCAATTTTCAA 2147377
Query 158023 ACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCA 158082
|| | || || || | ||||| || | ||||||| || || || ||||| ||||
Sbjct 2147376 ACAATGATAACCGACTTGACAGGCCTTCATGTAGCAAATGCTTCCCTGTTAGACGAAGGT 2147317
Query 158083 ACTGCAGCAGCAGAAGC 158099
||| |||||||||||||
Sbjct 2147316 ACTTCAGCAGCAGAAGC 2147300
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 158569 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGT 158628
|| || ||| | || || || || ||||| |||||||| ||| |||||||||| || |||
Sbjct 2144112 GCTTATAGACTTGCGCTGCAAACCAGAGAACAGCATATAAGACGAGACAAAGCGACAAGT 2144053
Query 158629 AACATCTGCACAGCACAAGCACTGCTGGCTAATATGTC 158666
|| || |||||||| ||||| || | |||||||||||
Sbjct 2144052 AATATATGCACAGCTCAAGCGTTGTTAGCTAATATGTC 2144015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587929642466320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |