Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 6e-13 >seq4 Length=5636934 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 157963 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 158022 || |||||||||||| |||| | | ||||| ||||| ||| |||| |||||| ||| Sbjct 2147436 TATACTCCCTATCAACCTGAAGTTGCACAGGGTAGATTAGAAAGTTTACTCAATTTTCAA 2147377 Query 158023 ACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCA 158082 || | || || || | ||||| || | ||||||| || || || ||||| |||| Sbjct 2147376 ACAATGATAACCGACTTGACAGGCCTTCATGTAGCAAATGCTTCCCTGTTAGACGAAGGT 2147317 Query 158083 ACTGCAGCAGCAGAAGC 158099 ||| ||||||||||||| Sbjct 2147316 ACTTCAGCAGCAGAAGC 2147300 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 158569 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGT 158628 || || ||| | || || || || ||||| |||||||| ||| |||||||||| || ||| Sbjct 2144112 GCTTATAGACTTGCGCTGCAAACCAGAGAACAGCATATAAGACGAGACAAAGCGACAAGT 2144053 Query 158629 AACATCTGCACAGCACAAGCACTGCTGGCTAATATGTC 158666 || || |||||||| ||||| || | ||||||||||| Sbjct 2144052 AATATATGCACAGCTCAAGCGTTGTTAGCTAATATGTC 2144015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587929642466320