Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq57 187 6e-42 seq504 149 1e-30 >seq57 Length=2082711 Score = 187 bits (206), Expect = 6e-42 Identities = 175/223 (78%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | ||||| || ||||| || ||||| |||||||| ||||| | |||||| Sbjct 1620898 TCTTAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGT 1620957 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | |||||| || |||||||| | || |||||||||||| ||||| || Sbjct 1620958 GCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCTGGCGGAATTCC 1621017 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||||||||| ||| || || || || ||||| ||| ||| |||||||| Sbjct 1621018 TTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTTCAACTTCAAG 1621077 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| ||| |||||||| | || || ||||| | |||||| Sbjct 1621078 TGTAATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCATT 1621120 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | ||||| || ||||| || ||||| || ||||| ||||| | ||||| Sbjct 1619302 TCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTGAGAGAGT 1619361 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| || |||||||| | | |||||||||||| ||||| || Sbjct 1619362 GCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTGGAATTCC 1619421 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||||||||| ||| || || || || ||||| || ||| |||||||| Sbjct 1619422 TTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAACTTCAAG 1619481 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||||||||| | ||| || || || | ||||| Sbjct 1619482 TGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523 Score = 168 bits (186), Expect = 1e-36 Identities = 171/223 (77%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | ||| | ||||| |||||||| ||||||||||||||||| | ||||| Sbjct 1619530 TCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGT 1619589 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || |||||||| | |||||| || || || ||||| || || || ||||| ||||| || Sbjct 1619590 TCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCC 1619649 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| || || ||||| ||| |||||||| || || || || || |||||||| Sbjct 1619650 TTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAG 1619709 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| || ||||| |||| |||||| || || | ||||||| Sbjct 1619710 AGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1619752 Score = 168 bits (186), Expect = 1e-36 Identities = 171/223 (77%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| || ||||| |||||||| || ||||| |||||||||||||| | ||| || Sbjct 1619986 TCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCAGAAAGGGT 1620045 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| | ||| || || ||||| || | | ||| ||||| || || || || Sbjct 1620046 GCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGTGGTATTCC 1620105 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || |||||||| || || || || ||||| ||||| ||| ||| |||||||| Sbjct 1620106 TTCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTCTACTTCAAG 1620165 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||| ||||||||||| | ||| || ||||| | |||||| Sbjct 1620166 AGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCATT 1620208 Score = 156 bits (172), Expect = 9e-33 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||||| | ||| | || | |||||||| || || ||||||||||||| || || Sbjct 1621126 TCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCGGATAGGGT 1621185 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | |||||| || || || || | |||||| || || ||||| || || Sbjct 1621186 ACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAGGGATTCC 1621245 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || ||||||||||| ||| ||||| ||||| || || ||| || |||||||| Sbjct 1621246 TTCCTTATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAACTTCAAG 1621305 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | ||||| || ||||| ||||||||||| | ||||||| Sbjct 1621306 AGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCATTT 1621349 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| |||||||| ||||||||||||||||| | ||||||| |||||||| | |||| Sbjct 1619093 TGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGC 1619152 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || ||||| || || || ||||| || || ||||| || || || ||||| Sbjct 1619153 TTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGATTTTG 1619212 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || ||||| || || || || |||||||| |||| || ||||| ||| Sbjct 1619213 GCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTTCCAGTC 1619272 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 | |||||| ||||| | ||||||| Sbjct 1619273 AGAGTTTTCACGAAAATTTGCATT 1619296 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| |||||||| ||||||||||||||||| | ||||||| |||||||| | |||| Sbjct 1620461 TGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCATCTTCCAACTGC 1620520 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || ||||| || || || ||||| || || ||||| || || || ||||| Sbjct 1620521 TTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGATTTTG 1620580 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || ||||| || || || ||||||||||| |||| || ||||| ||| Sbjct 1620581 GCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTTCCAGTC 1620640 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 | |||||| || || | ||||||| Sbjct 1620641 AGAGTTTTCACAAAAATTTGCATT 1620664 Score = 145 bits (160), Expect = 2e-29 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || || | ||||| || | ||| || ||||| || |||||||| || | ||||| Sbjct 1619758 TCTAAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAGACAGAGT 1619817 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | |||||| ||||| ||||| | || ||||| ||||| ||||| || Sbjct 1619818 GCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTGGAATACC 1619877 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||||||||| || || || || || ||||| || ||||||||| | Sbjct 1619878 TTCTTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCACTTCTAA 1619937 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| |||||||| || || || || || || | |||||| Sbjct 1619938 GGTAATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCATT 1619980 Score = 136 bits (150), Expect = 9e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCC 194983 ||||| || || || | ||| || || || |||||||| ||||| | |||| || | | Sbjct 1618624 TCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGACAAG-GTGCGAC 1618682 Query 194984 CATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTT 195043 ||||||| | || || |||||||| || | | ||| ||||| || || || ||||| | Sbjct 1618683 CATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTGGTATTCCTTCCT 1618742 Query 195044 TGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAA 195103 ||||||||||||| || || || ||||| ||||| || ||| |||||||| |||| Sbjct 1618743 TGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCAACTTCAAGAGTAA 1618802 Query 195104 CCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| ||||||||||| || || | |||||| Sbjct 1618803 TGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 ||||||||||| || ||||||||||| | || || | |||||||| | |||||| ||| Sbjct 1620239 GTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCATCTTCCAACTGCTTGCCT 1620298 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| | | ||||| ||||| ||||| |||||||| ||||||||||| || Sbjct 1620299 GCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTAGCTTTC 1620358 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || ||||| || || || ||| ||||| | ||| | || ||||| || || ||| Sbjct 1620359 ACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGGTTTTTCCGGTTAACGTT 1620418 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 1620419 TTGACGAATATCTGCAT 1620435 >seq504 Length=327254 Score = 149 bits (164), Expect = 1e-30 Identities = 147/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || ||||||||||||| ||| || | |||||||| ||||| || || || || | Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || ||| || ||||||||||| |||||||| ||||| || ||| ||| || || | Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTTT 214223 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| ||||| || ||| || |||||||||| || || || ||||||||||| || | Sbjct 214224 CAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACAA 214283 Query 195131 ACACTTGCAT 195140 | | |||||| Sbjct 214284 AAATTTGCAT 214293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109246522691879