Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq57 93.3 3e-14
>seq57
Length=2082711
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
||||||| |||| || || || | |||| || |||||||||||| || || || |
Sbjct 1619979 TTCCTCCTCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCAG 1620038
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
||||| | || |||| || | |||||| || || || || | | ||||||||| | |
Sbjct 1620039 AAAGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGTG 1620098
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | || ||||| || ||||||| ||| || | | || | ||| | || |
Sbjct 1620099 GTATTCCTTCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTCTA 1620158
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | || || || ||||| || |||||||| || |||||||||||
Sbjct 1620159 CTTCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCAT 1620207
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||| || ||||| || || || | || |||| || ||||| |||||||| ||
Sbjct 1619332 TTCTTTCTGGATATTATAATCTGAGAGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAA 1619391
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|||| | ||| |||||| | || | || || || || ||| || || ||
Sbjct 1619392 GATTAACCTTTGTTGGTCTGGTGGAATTCCTTCTTTATCTTGAATTTTGGCCTTAACATT 1619451
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | ||| | ||||| || | || ||||| ||||| || |||||||||||
Sbjct 1619452 TTCGATAGTGTCAGATGGTTCAACTTCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCAC 1619511
Query 34970 AAAGATCTGCATA 34982
|||||||||||||
Sbjct 1619512 AAAGATCTGCATA 1619524
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
||||||||||||||||| || ||||| |||| |||| |||| |||||| || || ||
Sbjct 1618877 TCTTTCTGAATGTTATAATCAGAAAGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAA 1618936
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| | | |||||| || | || | || ||||| || |||||| ||| || |
Sbjct 1618937 ATCAACCTTTGCTGATCGGGAGGGATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTT 1618996
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | || || || | ||| || |||||||| || | ||| |||||
Sbjct 1618997 TCAATTGTATCAGAAGGTTCTACTTCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCACG 1619056
Query 34971 AAGATCTGCATA 34982
|| |||||||||
Sbjct 1619057 AATATCTGCATA 1619068
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
|||||||||||| ||||| || ||||| | || |||| || | ||| |||||||| ||
Sbjct 1620928 TTCTTTCTGAATATTATAATCTGAAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAA 1620987
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|||| || ||| |||||| |||| | || || || || ||| || || ||
Sbjct 1620988 GATTAATCTTTGTTGGTCTGGCGGAATTCCTTCTTTATCTTGAATTTTAGCCTTAACATT 1621047
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | ||| | ||||| || | || || |||||||| || || ||||| ||
Sbjct 1621048 TTCGATTGTGTCAGAAGGTTCAACTTCAAGTGTAATCGTTTTTCCTGTAAGGGTCTTGAC 1621107
Query 34970 AAAGATCTGCAT 34981
|||||||||||
Sbjct 1621108 GAAGATCTGCAT 1621119
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811
||||| || | ||| |||| || | || | || ||| |||||||| ||||| ||
Sbjct 1618610 TTTCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCT 1618669
Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871
|| | | | || |||| |||| ||||| || || || || | | ||||||||| |
Sbjct 1618670 GACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGT 1618729
Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931
|| | || |||||||| ||| ||| ||| || | | || | ||| | |||
Sbjct 1618730 GGTATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCA 1618789
Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || | || ||||||||||| || | ||| |||||||| || ||||||
Sbjct 1618790 ACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCATA 1618840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324568171822536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |