Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_016160.1
Length=36661
Score E
Sequences producing significant alignments: (Bits) Value
seq3409 796 0.0
seq8203 105 2e-18
seq7786 95.1 3e-15
seq4809 89.7 1e-13
>seq3409
Length=8325
Score = 796 bits (882), Expect = 0.0
Identities = 1152/1607 (72%), Gaps = 34/1607 (2%)
Strand=Plus/Plus
Query 8 TTTAACGCTAACCCGAtttttttAGTTTT-AAGGTGTTGACATATGGCAGATAAACGAAT 66
||||||||||||||||||||||||||||| |||||| | || |||||||| |||||||
Sbjct 6596 TTTAACGCTAACCCGATTTTTTTAGTTTTCAAGGTGCTCTCAAATGGCAGAAAAACGAAA 6655
Query 67 CCGTTCCGACAGTTCGGCGGCAGCGGTTCAGGCCATGAAAAATGCAGCTGTGGACACCAT 126
||| || |||||| || |||| ||| | ||||||||||||||||| | | ||||||| |
Sbjct 6656 CCGCTCTGACAGTGCGACGGCGGCGATCCAGGCCATGAAAAATGCGACCGGGGACACCCT 6715
Query 127 CGATCCGCCGTCCCATGCAGGTTTGGAGAAAAAAGCCGAACCATTCTGGCATGACAATAT 186
| || ||| | || || |||||||| ||||||||||| || || ||||||||||||||
Sbjct 6716 TCAGCCCCCGGCGCACGCGGGTTTGGAAAAAAAAGCCGAGCCTTTTTGGCATGACAATAT 6775
Query 187 CAGATCGAAAGCTCTGGACAGCTGGACGCCTGCCGACCTTCTAGCCGCCGTAGAACTTGC 246
|||| ||||| |||| |||||||| || || ||||| ||||||| || || || ||
Sbjct 6776 TCGATCCAAAGCATTGGATAGCTGGACACCCGCTGACCTGTTAGCCGCTGTTGAGCTGGC 6835
Query 247 TAATAATCAGCTCTATATCACCGTTTTACGCAAGGATTTACGCAAAGAAGAGCGCATACG 306
|||||||| | |||||||| | | ||||| |||||||| || ||||||||| | ||
Sbjct 6836 AAATAATCAACACTATATCAACATGTTACGGCGTGATTTACGTAACGAAGAGCGCGTGCG 6895
Query 307 CGGGGAGGAGCGAGACGAAGGCCTT---ATAAAAGACCTCCGCAAGCAAATTGTTGAGCT 363
||| |||| | || || | || || || ||||| | ||||| ||||| || || |
Sbjct 6896 CGGTGAGGCGAGAAAC-ATGG--TTGAAATTAAAGAATTGCGCAAACAAATCGTAGAATT 6952
Query 364 ACAACGAACTATCCTGGCTCAGCGCCGCGACCTCCAGATCCACTCCCACGCAACCAACGG 423
||| || | || |||| ||||| || || || || ||||| |||||||| ||||||||
Sbjct 6953 ACAGCGCGCGATTTTGGCACAGCGACGAGATCTGCAAATCCATTCCCACGCTACCAACGG 7012
Query 424 CGAAAGTCGCGACCAGAAGAAACGTAATCAG-AACGATCGTGATGCACGGAATACCAAAA 482
||||| ||||||||| | ||| || ||| || || | | || | | || |
Sbjct 7013 TGAAAGCCGCGACCAGC-GTAACAAAAACAGGAATGACAGGAACGCCAGAAGCACGGTCA 7071
Query 483 ACGAGCATCAGGACCAGGACGATAACCTGATCGCCTTTCCCAAGCACGGATAAAAGACT- 541
| ||||| | | |||||||| |||||||| ||||| || || ||| | |
Sbjct 7072 GTGGTCATCAACGCGAAGACGATAATCTGATCGCGTTTCCAAAACAT---TAAGGGGCAT 7128
Query 542 --ATGACGCGAGGTGAGCGTGTAATAGCGTTCATTGAGCGCTTTTGCATCGTGCCAGAAG 599
||||||||||||||||| || ||||||||||||||||||| |||||| ||||| ||||
Sbjct 7129 TCATGACGCGAGGTGAGCGCGTGATAGCGTTCATTGAGCGCTATTGCATTGTGCCGGAAG 7188
Query 600 GCAAGCTTATCGGCCAACCTATGCGGTTGGACCCCTTTCAGAAAGATTTCATCCTGGCGG 659
||||| ||||||| || || ||| | | || ||| |||||||| || | || | |
Sbjct 7189 GCAAGTTTATCGGACAGCCGATGAAGCTTGATGGCTTCCAGAAAGACTTTCTGCTTGATG 7248
Query 660 TTTACGACAATCCAGCCGGAACGGATATGGCGATCCTCAGCATCGCCCGAAAAAATGGTA 719
| || ||||| || | || || | ||| || | |||||||||||||| || || |
Sbjct 7249 TCTATGACAACCCGGTGGGCACCAGCAGGGCAATTTTAAGCATCGCCCGAAAGAACGGGA 7308
Query 720 AGACTGGCCTGATTGCCGGAATTCTGCTGGCTCACCTGGTGGGGCCTGAAGCGGTGCAGA 779
| || || | ||||| ||||| || || ||||||||||| || || ||||||||||| |
Sbjct 7309 AAACCGGGTTAATTGCTGGAATACTTCTTGCTCACCTGGTTGGCCCAGAAGCGGTGCAAA 7368
Query 780 ACACGCAGATTGTCAGCGGTGCACTCAGCCGGGAACAGGCGGCCATCGTTTTTAACCTCG 839
|| | ||||| ||||| || || | ||||| || ||||| || | || |||| |||
Sbjct 7369 ACTCTCAGATCGTCAGTGGGGCGATGAGCCGAGAGCAGGCTGCGCTGGTCTTTAGCCTGT 7428
Query 840 CGGTGAAGATGGTTAACCTGAACCCCAAGCTGCAGGAGATTGTGCACATTACGCCCAGCG 899
|||| || ||| |||| || |||||| ||| ||||| |||||||| || | |||||||
Sbjct 7429 CGGTCAAAATGATTAATCTTAACCCCGCGCTACAGGACATTGTGCATATCATTCCCAGCG 7488
Query 900 GCAAAAAGCTGATCGGCCTGCCGTGTAACGTCGAATACAAGGCTTTATCCGCAGAAGGTA 959
| || |||||| || || ||||| || || |||||||| | |||| || ||||
Sbjct 7489 GTAAGCGGCTGATTGGTACCCCTTGTAATGTTGAGTACAAGGCGCTGGCCGCCGAGGGTA 7548
Query 960 AGACGACGCACGGCCTTTCCCCCATTCTGGCCATTCTCGATGAAACAGGGCAGGT--TAG 1017
| || | ||||| ||||| || | ||||||||||| |||||| |||||||| |||
Sbjct 7549 AAACCGCACACGGTCTTTCTCCAGTGCTGGCCATTCTGGATGAAGTGGGGCAGGTAGTAG 7608
Query 1018 GGGCCCGCAGGATGATTTTATCGATGCAATAACTACGGCGCAGGGGGCTCATGAAAACCC 1077
| | ||||| ||||||| | || || || ||| | || ||||| ||||| | ||
Sbjct 7609 GTCCGCGCAG--TGATTTTGTTGACGCCATTGTTACCTCACAAGGGGCGCATGAGACACC 7666
Query 1078 GCTGCTAATCGTTATCAGTACGCAGGCAGCAAACGATGCTGACCTGCTTAGCATCTGGAT 1137
|||| || | ||||||||| ||||| || ||||| || |||||| | ||| | |||||
Sbjct 7667 TTTGCTGATTGCTATCAGTACCCAGGCGGCCAACGACGCCGACCTGTTGAGCGTGTGGAT 7726
Query 1138 TGATGATGCGGTCAAATCGAAAGATCCGCACATCGTGTGCCACGTTTATGAAGCGCCAAA 1197
|||||| |||| | || ||||| || || || ||||| || || || |||
Sbjct 7727 TGATGACGCGGCAACTTCTGGCGATCCACATATTGTTTGCCATGTGCATACTGCCGAAAA 7786
Query 1198 AGACGCTGATATCAGTAAACGCGAGTCCTGGCTGGCTGCGAACCCGGCACTGGGAACATT 1257
|||||| || || | | || | | |||| || || || ||||| ||||||| ||
Sbjct 7787 AGACGCCGACATTATGGATCGGGCTGCATGGCGTGCCGCTAATCCGGCGTTGGGAACCTT 7846
Query 1258 CAGGTCAGAAAAAGACATGGCGCGCCAGGCTGAGAAAGCTGGCCGA--ATGCCAAGCTTC 1315
| ||| | || |||| ||||| ||| || | || | ||| ||||| |||
Sbjct 7847 TCGTTCACTGGACGAGATGGAGCGCCGGGCAGAAGAGGC--GACGAGGATGCCCAGCAGT 7904
Query 1316 GAAAACACCTTCCGAAACCTCAACCTCAATCAGCGCGTGTCTACCGTATCGCCGTTTATC 1375
||||| ||||| || || ||||| || ||||||||||| || || || || ||||| ||
Sbjct 7905 GAAAATACCTTTCGTAATCTCAATCTAAATCAGCGCGTATCCACTGTGTCACCGTTCGTC 7964
Query 1376 TCCCGCAGCGTGTGGG-AGC---TTTGCGGA--GAGAT---GCCGATTAACACCCCGAGG 1426
||||| | || |||| ||| | | | || || || ||| | | ||
Sbjct 7965 TCCCGTAATGTTTGGGAAGCCAGTATTCTGAAGGACATTCGTCCGGGCATGATTGTTGGG 8024
Query 1427 AAGTGGTACGCGGGGCTGGATCTGTCAGCCAGGAACGACTTAACGGCGCTGGTTATCGCT 1486
|||| ||||||||||| || ||||||| | ||||||| | || |||||||| || |
Sbjct 8025 GAGTGCTACGCGGGGCTCGACCTGTCAGAAAAGAACGACCTTACCGCGCTGGTGATTGTG 8084
Query 1487 GGTGAAGCAGATGATGGTGTCTGGGATGTTTTCCCCTTCTTCTGGACACCGCAAAAGACT 1546
|| | | | || | | |||| || ||||| ||||||||||||||| |||||
Sbjct 8085 GGACAGGATAAAGAGCGCGACTGGCTGGTATTCCCGTTCTTCTGGACACCGGGTAAGAC- 8143
Query 1547 CTTG-AAGAGCGAACCAAAACGGACCGAGCACCCTATGACGTTTGGG 1592
|||| || || ||| || || || || ||||| |||||||
Sbjct 8144 CTTGCTCGACCGGGCCAGGCGAGATCGCGCCCCTTATGATGTTTGGG 8190
Score = 120 bits (132), Expect = 7e-23
Identities = 170/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 36059 ATGTGCGAGCAGCAGGGGCGCATAACACCAGCAACGGTGGTCGACCATATCGTGCCCCAC 36118
|||||| | ||||||| || |||||||| || || || ||||| ||| | || |||
Sbjct 6264 ATGTGCCACGAGCAGGGACGGATAACACCCGCTGTCGTTGTTGACCACATCATTCCGCAC 6323
Query 36119 AAACTGAAAGATGCGCTTAAGTCAGGTAACCCTCTGGCCATATCGAAAGCACAGCTCCTG 36178
||||| ||||| ||| | ||||| || || ||| ||| | || ||||| |
Sbjct 6324 AAACTTAAAGAAGCGTTGAAGTCTGGCGACAAGGCGGCGATAGCAAAGGCACAAACATTA 6383
Query 36179 TTCTGGAGTAAAGAGAACTGGCAGCCACTGTGCAAAGCGCATCATGACTCAACGAAACAG 36238
||||||| |||||||||||||||| ||||||| ||||||| || || |||||
Sbjct 6384 TTCTGGAATAAAGAGAACTGGCAGGGACTGTGCGTCCCGCATCACTCATCGACTAAACAA 6443
Query 36239 AGAATGGAGAAGAGCGGCGCGGTAATCGGTTGTGATGCCAACGGCTACCCGCTCGATCC 36297
|||||||| ||| | | | ||| ||||| || |||| || || || ||||||||
Sbjct 6444 AGAATGGAAAAGCGGGACAAGGTCATCGGCTGCGATGAGAATGGTATGCCTCTCGATCC 6502
>seq8203
Length=1368
Score = 105 bits (116), Expect = 2e-18
Identities = 167/236 (71%), Gaps = 9/236 (4%)
Strand=Plus/Plus
Query 24771 TACAGATACCGACCGATTCCCCACTGAACGGCAGCGCGCTTCATTGCACCGGAACGACCA 24830
|| ||||| |||||||| |||||||||| || || |||||||||| || || |||
Sbjct 385 TAGAGATATCGACCGATCCCCCACTGAAAAGCTGCTCGCTTCATTGAGCCAGACATGCCA 444
Query 24831 CCTTTGACGGCTTCTACCTGCGTGTTTTCAGCAGCATCCCATTTGGTTACCCATTCGGAA 24890
|| || || || || ||||| || || || || | ||||| || |||||||| || |
Sbjct 445 CCCTTAACCGCCTCCACCTGTGTTTTATCTGCGCCGTCCCACTTCGTTACCCACTCATCA 504
Query 24891 TCAATCTTTATTGATATGCCGCATTCAACGCCGCCGTT--GTTGGGAATATCGCGGTATT 24948
||| || ||||||| || ||||||||| | || || | | | |||
Sbjct 505 CGAATACGAATGAATATGCCACACATAACGCCGCCATCAGGTCCGGGAGA-----GAATT 559
Query 24949 CATTGCGCCA-TCCTGCTTTGCCGCAAACATCGTCCAGGCGTTTCATGATTGCCCG 25003
|||| ||| | || |||| || ||||| |||||||| ||||||||||| |||||
Sbjct 560 CATTTTTCCAATTCT-CTTTTCCACAAACGTCGTCCAGTCGTTTCATGATGGCCCG 614
>seq7786
Length=1398
Score = 95.1 bits (104), Expect = 3e-15
Identities = 114/151 (75%), Gaps = 7/151 (5%)
Strand=Plus/Minus
Query 35405 AACCGCGCATTCTCGTGCGCATATCAACCAAGAGCTTTTCGGGATATGAGACAGAGACAG 35464
||||| |||||| ||||| | | | | |||||||| || | |||| | ||| |||
Sbjct 1392 AACCGTGCATTCGCGTGCACTTCACTAG--AGAGCTTTCCGTAGTGTGAGTCTGAGGCAG 1335
Query 35465 GACGGTGGCTTACATCGTGCCGCTCTTGGGCTGTCCATGTCTGCGAGAACTGGCTCATAT 35524
| |||||| | || |||| ||||||| || ||| |||||||| || |||| ||||| |
Sbjct 1334 GGCGGTGGATCACCTCGTTCCGCTCTCGG-CTGCCCATGTCTACGCGAACAGGCTCGCAC 1276
Query 35525 CACCAAAAAGGTAAATACGATGTCCAATATC 35555
||| | ||||||||||||||| |||||||
Sbjct 1275 CAC--AGAAGGTAAATACGATG--CAATATC 1249
>seq4809
Length=3389
Score = 89.7 bits (98), Expect = 1e-13
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 32247 GGAGGCTGCTTAATGGCTAACCTACGCAAAGAAGCACGCGGCAGAGAATGCCAGGTACGT 32306
||||| ||| ||||| || || ||||| || | ||| |||| || ||||| |
Sbjct 572 GGAGGTAGCT--ATGGCGAATCTTAAAAAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGG 629
Query 32307 ATTTACGGCGTATGCAATGGCAACCCTGAAACTACAGTTCTGGCACATTACCGGATGGCT 32366
| | || | || || || ||| ||||||| ||| ||||| ||||||| ||| |
Sbjct 630 CTCTCGGGTATCTGTAACGGTAACACTGAAACCGTAGTGCTGGCCTATTACCGAATGTCC 689
Query 32367 GGAATTTGCGGAACGGGAATGAAGCCTGACGACCTGATCGGCGCATGG 32414
|| |||||||| || || ||||||||||||||||| | |||||||||
Sbjct 690 GGCATTTGCGGCACAGGCATGAAGCCTGACGACCTTTTTGGCGCATGG 737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117170585887062
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