Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq33 170 2e-37 seq1 87.8 2e-12 >seq33 Length=2490231 Score = 170 bits (188), Expect = 2e-37 Identities = 151/189 (80%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 ||||||||||| || |||||||| ||||| |||||||||| |||||| || || || || Sbjct 181687 ATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATTGCAATTTGG 181628 Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565 ||||| |||||||| || ||||||| || |||||| || | | |||||||| | ||||| Sbjct 181627 AAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTAAACCTCTCAACTAAG 181568 Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625 ||||||||||| || |||||| || ||||||||||| | |||| ||||||||| Sbjct 181567 TTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAAATAAAATGT 181508 Query 37626 CTTTCATCA 37634 |||| ||| Sbjct 181507 TTTTCTTCA 181499 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 36822 ATTTTTTAAAAATCTTCATCTAACGTAAATTTTATTTC--CTTATTACTATTCATAACTC 36879 || ||||||||||| | | ||| ||||| |||| ||| | || ||| || | Sbjct 184265 ATATTTTAAAAATCCGCTTGTAAAGTAAAAACACTTTCTTCTTTTGACGC--CATTACAC 184208 Query 36880 CCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATA 36939 | ||| ||||||||||||||| |||| || |||||||| |||||||| ||||||| Sbjct 184207 CTGCTTTCTGATATTCTCCAACTTTCTTTTCAAAGAAATTTGTTTTTCCTTCCAGTGATA 184148 Query 36940 TATTTTCCATAAAATCAAATGGATT 36964 ||| |||||| || ||||||||||| Sbjct 184147 TATGTTCCATGAAGTCAAATGGATT 184123 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 ||||||||||| ||||||||||| || || | ||||||||||| |||||||| | Sbjct 182650 CTTCATCTCTAGAAATCAATTCATTGCTGAAAGTAAGCCCTGGCATTAATCCTCTTTTCT 182591 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||||||||| || ||||| ||||| || || | ||||| || || ||||| | Sbjct 182590 TTAACCAAAATATAGCCGCAAAGCTACCAGAGAAAAATACGCCTTCCACAGCAGCAAAAG 182531 Query 37318 CTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTG 37377 | | || | | | ||||| | | | | | || ||||||| | ||| || | Sbjct 182530 CAATAATTCTTTCTGCAAAAGTGGCAGTCTTAGAGGAGATCCATTCCAAAGCCCAGTCAG 182471 Query 37378 CCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGA 37421 | ||| || ||||| || | || |||||||| || |||||| Sbjct 182470 CTTTTTTCTTCACACAATCCAGAGTCTCAATTGCATTAAAGAGA 182427 >seq1 Length=13425595 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 153292 TTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCTAATA 153351 |||||||||| || || ||||||| ||||| ||| | ||||| |||||||| |||| Sbjct 5683901 TTTTACATACGAAGTTATGGATAGCTGATAGAAAATCAGCTTATATTGGAAGTGCCAATA 5683842 Query 153352 TGGATTGGAGATCACTAACTCAAGTAAAAGAATTAGGTATA 153392 || ||||||||| | ||||||| |||||||||||| || Sbjct 5683841 CAGACTGGAGATCATTGTCTCAAGTTAAAGAATTAGGTTTA 5683801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592194360713480