Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq33 170 2e-37
seq1 87.8 2e-12
>seq33
Length=2490231
Score = 170 bits (188), Expect = 2e-37
Identities = 151/189 (80%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505
||||||||||| || |||||||| ||||| |||||||||| |||||| || || || ||
Sbjct 181687 ATATAAGTATCTATGAGTAAACTGTACATCTCAGAGTGAACATTTTCCATTGCAATTTGG 181628
Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565
||||| |||||||| || ||||||| || |||||| || | | |||||||| | |||||
Sbjct 181627 AAACCGTAAAAACATCTTGCTTCAGTTACTTGAACTTCTTGACTAAACCTCTCAACTAAG 181568
Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625
||||||||||| || |||||| || ||||||||||| | |||| |||||||||
Sbjct 181567 TTTTCATTAACAATTCCATCAGAGGCAGCAAAGAAAGCCAATACATGAGAAATAAAATGT 181508
Query 37626 CTTTCATCA 37634
|||| |||
Sbjct 181507 TTTTCTTCA 181499
Score = 95.1 bits (104), Expect = 1e-14
Identities = 109/145 (75%), Gaps = 4/145 (3%)
Strand=Plus/Minus
Query 36822 ATTTTTTAAAAATCTTCATCTAACGTAAATTTTATTTC--CTTATTACTATTCATAACTC 36879
|| ||||||||||| | | ||| ||||| |||| ||| | || ||| || |
Sbjct 184265 ATATTTTAAAAATCCGCTTGTAAAGTAAAAACACTTTCTTCTTTTGACGC--CATTACAC 184208
Query 36880 CCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATA 36939
| ||| ||||||||||||||| |||| || |||||||| |||||||| |||||||
Sbjct 184207 CTGCTTTCTGATATTCTCCAACTTTCTTTTCAAAGAAATTTGTTTTTCCTTCCAGTGATA 184148
Query 36940 TATTTTCCATAAAATCAAATGGATT 36964
||| |||||| || |||||||||||
Sbjct 184147 TATGTTCCATGAAGTCAAATGGATT 184123
Score = 93.3 bits (102), Expect = 5e-14
Identities = 155/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257
||||||||||| ||||||||||| || || | ||||||||||| |||||||| |
Sbjct 182650 CTTCATCTCTAGAAATCAATTCATTGCTGAAAGTAAGCCCTGGCATTAATCCTCTTTTCT 182591
Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317
| | ||||||||| || ||||| ||||| || || | ||||| || || ||||| |
Sbjct 182590 TTAACCAAAATATAGCCGCAAAGCTACCAGAGAAAAATACGCCTTCCACAGCAGCAAAAG 182531
Query 37318 CTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTG 37377
| | || | | | ||||| | | | | | || ||||||| | ||| || |
Sbjct 182530 CAATAATTCTTTCTGCAAAAGTGGCAGTCTTAGAGGAGATCCATTCCAAAGCCCAGTCAG 182471
Query 37378 CCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGA 37421
| ||| || ||||| || | || |||||||| || ||||||
Sbjct 182470 CTTTTTTCTTCACACAATCCAGAGTCTCAATTGCATTAAAGAGA 182427
>seq1
Length=13425595
Score = 87.8 bits (96), Expect = 2e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 153292 TTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCTAATA 153351
|||||||||| || || ||||||| ||||| ||| | ||||| |||||||| ||||
Sbjct 5683901 TTTTACATACGAAGTTATGGATAGCTGATAGAAAATCAGCTTATATTGGAAGTGCCAATA 5683842
Query 153352 TGGATTGGAGATCACTAACTCAAGTAAAAGAATTAGGTATA 153392
|| ||||||||| | ||||||| |||||||||||| ||
Sbjct 5683841 CAGACTGGAGATCATTGTCTCAAGTTAAAGAATTAGGTTTA 5683801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592194360713480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |