Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_018088.1
Length=104936
Score E
Sequences producing significant alignments: (Bits) Value
seq2248 96.9 2e-15
>seq2248
Length=16282
Score = 96.9 bits (106), Expect = 2e-15
Identities = 254/388 (65%), Gaps = 0/388 (0%)
Strand=Plus/Minus
Query 72362 ACGGTTTACGTAATTCTACTGTATCCTCATTGATGCCAAGTGAAACAAGTTCTCAGGTAT 72421
||||| | ||||| || || | || | |||||||| ||||| || || | |
Sbjct 479 ACGGTCTGCGTAACTCCACGCTCTCTGCGTTGATGCCGTCGGAAACCTCGTCACAAATTT 420
Query 72422 CTAATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAAGCAAGTAAAG 72481
| || || || || ||||| |||||||| |||||| || || || || || ||||
Sbjct 419 CCAACGCCACCAACGGTATCGAACCACCACGCGGTCACATCAGTATCAAGGCGTCAAAAG 360
Query 72482 ATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATGGCTAATGACTATGAATTGT 72541
| || || ||| || || || || || || || ||| ||| |||||
Sbjct 359 ACGGCATTTTGCGCCAGGTGGTGCCGGATTACAAAACCCTGAAGGATGCCTACGAATTAC 300
Query 72542 TGTGGAATATTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATGCAAAAGTTTG 72601
||||| | || || | |||| | ||||| | || | |||| | ||||| |||||||
Sbjct 299 TGTGGGAAATGCCGAACAATGACGGCTACCTGCAACTGGTTGGGCTGATGCAGAAGTTTG 240
Query 72602 TCGATCAGGCAATCTCTGCGAACACAAATTATGACCCTACTAAATTCGCAAATGGCAAAG 72661
|||||||||| || ||||| ||||| || || || || | ||| | || ||||
Sbjct 239 TCGATCAGGCTATTTCTGCCAACACCAACTACGATCCGGCGCGCTTCCCGTCAGGAAAAG 180
Query 72662 TCCCAGTTAAGCAAATTCTTAAAGATTTAATACGAGGCTATAAGCTTGGTGTTAAAACAT 72721
| || | || || | || | || || | | ||||||| | || | |||||
Sbjct 179 TGCCGATGAAACAGTTGCTGACTGACTTGCTTACCGCCTATAAGTTCGGGTTGAAAACGC 120
Query 72722 TCTATTACCATAACACCCGTGATGGTGC 72749
| ||||| || ||||||||||| |||||
Sbjct 119 TGTATTATCAAAACACCCGTGACGGTGC 92
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 335602747414129
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |