Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq2248 96.9 2e-15 >seq2248 Length=16282 Score = 96.9 bits (106), Expect = 2e-15 Identities = 254/388 (65%), Gaps = 0/388 (0%) Strand=Plus/Minus Query 72362 ACGGTTTACGTAATTCTACTGTATCCTCATTGATGCCAAGTGAAACAAGTTCTCAGGTAT 72421 ||||| | ||||| || || | || | |||||||| ||||| || || | | Sbjct 479 ACGGTCTGCGTAACTCCACGCTCTCTGCGTTGATGCCGTCGGAAACCTCGTCACAAATTT 420 Query 72422 CTAATGCAACAAATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAAGCAAGTAAAG 72481 | || || || || ||||| |||||||| |||||| || || || || || |||| Sbjct 419 CCAACGCCACCAACGGTATCGAACCACCACGCGGTCACATCAGTATCAAGGCGTCAAAAG 360 Query 72482 ATGGTATCTTGAAGCAAGTAGTACCTCATATTGGTACAATGGCTAATGACTATGAATTGT 72541 | || || ||| || || || || || || || ||| ||| ||||| Sbjct 359 ACGGCATTTTGCGCCAGGTGGTGCCGGATTACAAAACCCTGAAGGATGCCTACGAATTAC 300 Query 72542 TGTGGAATATTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATGCAAAAGTTTG 72601 ||||| | || || | |||| | ||||| | || | |||| | ||||| ||||||| Sbjct 299 TGTGGGAAATGCCGAACAATGACGGCTACCTGCAACTGGTTGGGCTGATGCAGAAGTTTG 240 Query 72602 TCGATCAGGCAATCTCTGCGAACACAAATTATGACCCTACTAAATTCGCAAATGGCAAAG 72661 |||||||||| || ||||| ||||| || || || || | ||| | || |||| Sbjct 239 TCGATCAGGCTATTTCTGCCAACACCAACTACGATCCGGCGCGCTTCCCGTCAGGAAAAG 180 Query 72662 TCCCAGTTAAGCAAATTCTTAAAGATTTAATACGAGGCTATAAGCTTGGTGTTAAAACAT 72721 | || | || || | || | || || | | ||||||| | || | ||||| Sbjct 179 TGCCGATGAAACAGTTGCTGACTGACTTGCTTACCGCCTATAAGTTCGGGTTGAAAACGC 120 Query 72722 TCTATTACCATAACACCCGTGATGGTGC 72749 | ||||| || ||||||||||| ||||| Sbjct 119 TGTATTATCAAAACACCCGTGACGGTGC 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335602747414129