Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq57 185 7e-42 seq504 118 8e-22 seq252 87.8 1e-12 >seq57 Length=2082711 Score = 185 bits (204), Expect = 7e-42 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | ||||||||||||||| || || ||||| ||||||||||| | Sbjct 1620437 CCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1620496 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | |||| ||||| ||||| || ||||| || | |||||| ||||| || || Sbjct 1620497 AGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGG 1620556 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| ||||| || ||||| ||||||| |||| | ||| ||||| | |||||| Sbjct 1620557 ATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACT 1620616 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | ||||| || || | |||||| ||||| || ||||| Sbjct 1620617 TCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1620663 Score = 183 bits (202), Expect = 2e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | | || || | ||| | ||||||||||| || |||||||| || | Sbjct 1619751 TTCCTCCTCTAAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATTGTAGTCAG 1619810 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | |||| ||||| ||||| |||||||| ||||| | ||||||||| || | Sbjct 1619811 ACAGAGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTGATCTGGTG 1619870 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| |||||||||||||||||||| ||| ||| |||||| |||||||||| ||||| Sbjct 1619871 GAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGACGGTTCCA 1619930 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | || | || || || ||||| || || |||||||||||||| Sbjct 1619931 CTTCTAAGGTAATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCAT 1619979 Score = 183 bits (202), Expect = 2e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| | ||| | ||| ||||| | || || ||||| |||||||||||||| | Sbjct 1620207 TTCCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCAG 1620266 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| ||||| ||||| |||||||| ||||| | ||||||||| || | Sbjct 1620267 ACAGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTG 1620326 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| |||||||||||||||||||| ||| ||| |||| | || ||||| | ||| | Sbjct 1620327 GAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTA 1620386 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | |||| ||||| |||||||| ||||| || ||||||||||| Sbjct 1620387 CTTCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | ||| | ||||||||||||||| || || ||||| ||||||||||| | Sbjct 1619069 CCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1619128 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | |||| ||||| ||||| || ||||| || | |||||| ||||| || || Sbjct 1619129 AGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGG 1619188 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| ||||| || ||||| ||| ||| |||| | ||| ||||| | || ||| Sbjct 1619189 ATTCCTTCCTTATCCTGGATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACT 1619248 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | ||||| || || | |||||| || || || ||||| Sbjct 1619249 TCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACGAAAATTTGCAT 1619295 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | ||| ||||||||||| || || ||||| ||||||||||| | Sbjct 1619525 CCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGAT 1619584 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | |||| || || ||||| || ||||| || | |||||| ||||| || ||| Sbjct 1619585 AGAGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGA 1619644 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||||||||| || ||||| ||||| | |||| || ||||||| || ||| Sbjct 1619645 ATTCCTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACT 1619704 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||| | ||||| || || | |||||| ||||| || ||||| Sbjct 1619705 TCAAGAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCAT 1619751 Score = 152 bits (168), Expect = 4e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||||| | | || | ||| || ||||||||||| || ||||| ||||| | Sbjct 1620891 TTCCTCCTCTTAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTG 1620950 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| || || ||||| || || || || || | ||||| || |||| Sbjct 1620951 AAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCTGGCG 1621010 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| |||||||||||||||||||| || ||| |||| | |||||||| | ||| | Sbjct 1621011 GAATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGAAGGTTCAA 1621070 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||||| || | |||||| || || | || || || || |||||||| Sbjct 1621071 CTTCAAGTGTAATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCAT 1621119 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||| ||| | || ||||| || || ||||| ||||| | | || | |||| ||| Sbjct 1618631 ACTAGATGTAAAGTTGATTCCTTCTGAATATTATAATCTGACAAGGTGCGACCATCTTCC 1618690 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||| || ||||| || ||||| | || || || || || || ||||| || |||||| Sbjct 1618691 AATTGTTTCCCTGCGAAAATCAACCTTTGCTGGTCAGGTGGTATTCCTTCCTTGTCTTGA 1618750 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||| ||| |||| | ||||||||| | ||| ||||||||||| | ||||| Sbjct 1618751 ATTTTCGCTTTCACATTTTCAATAGTGTCAGATGGTTCAACTTCAAGAGTAATGGTTTTT 1618810 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||||||| |||||||| ||||| Sbjct 1618811 CCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | | | || | ||| || || |||||||| || ||||| ||||| | Sbjct 1619295 TTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATTATAATCTG 1619354 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || ||| | | |||| || | ||||| || || || || || | ||||| || || | Sbjct 1619355 AGAGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTGGTCTGGTG 1619414 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| |||||||||||||||||||| || ||| |||| | ||||||||| | ||| | Sbjct 1619415 GAATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGATGGTTCAA 1619474 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||||| || | || || || || | ||| || ||||| |||||||| Sbjct 1619475 CTTCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| | || | ||| ||||| | || || || || |||||||||||||||| Sbjct 1621119 TTCCACCTCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCGG 1621178 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| ||||| ||||| || ||||| || || || || ||||| || | Sbjct 1621179 ATAGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAG 1621238 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || ||||| |||||||||||||| ||||| |||| | ||| || || | || | Sbjct 1621239 GGATTCCTTCCTTATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAA 1621298 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| | || || || || || |||||||| || |||||||| Sbjct 1621299 CTTCAAGAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCAT 1621347 Score = 138 bits (152), Expect = 9e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | | ||| || | |||||| || |||||||| || ||||||||||| | Sbjct 1619979 TTCCTCCTCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCAG 1620038 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| || || || || || || || ||||| | || || || || | Sbjct 1620039 AAAGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGTG 1620098 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || ||||| ||||||||||| || ||||||| |||| | |||||||| | ||| | Sbjct 1620099 GTATTCCTTCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTCTA 1620158 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| | || || || || | ||| || || || |||||||| Sbjct 1620159 CTTCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCAT 1620207 Score = 138 bits (152), Expect = 9e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | | | || | ||| || ||||||||||| || ||||| ||||| | Sbjct 1620663 TTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATTATAATCTG 1620722 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| || || ||||| || || || || || | ||||| ||||| | Sbjct 1620723 AAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTGGTCGGGTG 1620782 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| ||||||||||| || ||||| ||||| | |||| || || |||| || | Sbjct 1620783 GAATTCCTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCTGACGGCTCAA 1620842 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| | ||||| || || | ||||||||||| || ||||| Sbjct 1620843 CTTCAAGAGTAATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCAT 1620891 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 || || ||||| || || || ||||| | | ||||| |||| ||||| || || || Sbjct 1618871 GTTGACTCTTTCTGAATGTTATAATCAGAAAGAGTTCGACCATCTTCCAACTGTTTCCCA 1618930 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 || || ||||| | || |||||||| || || ||||| ||||||||||| || |||| Sbjct 1618931 GCGAAAATCAACCTTTGCTGATCGGGAGGGATTCCTTCCTTATCTTGAATCTTAGCTTTT 1618990 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 ||| |||| | || ||||| | ||| ||||| | || | |||||| || ||||||||| Sbjct 1618991 ACATTTTCAATTGTATCAGAAGGTTCTACTTCTAAGGTAATCGTTTTTCCTGTTAAAGTT 1619050 Query 101453 TTTACAAATATCTGCAT 101469 || || ||||||||||| Sbjct 1619051 TTCACGAATATCTGCAT 1619067 >seq504 Length=327254 Score = 118 bits (130), Expect = 8e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| || ||||||||||||| | || | |||| || | || || || ||||| | Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAA 214163 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 |||| | || ||||| || ||||| |||||||||||||| || ||| || ||| ||| Sbjct 214164 TCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTTT 214223 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | ||||| || | ||| || ||||| || | ||||| || || |||||||| |||| Sbjct 214224 CAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACAA 214283 Query 101460 ATATCTGCAT 101469 | || ||||| Sbjct 214284 AAATTTGCAT 214293 >seq252 Length=802098 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||||| | | || || || | ||||||||||||||||| || ||||| | Sbjct 443916 CCTCCTCTTAGTCTGAGCACCAAGTGTAAAGTAGATTCTTTTTGTATGTTATAATCAGAA 443857 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| ||| ||||| |||||||| ||||| || || | ||| ||||| || || Sbjct 443856 AGAGTTCTGTTATCTTCCAACTGCTTACCGGCAAAAATTAATCTCTGCTGATCAGGAGGT 443797 Query 101363 ATGCCT 101368 || ||| Sbjct 443796 ATTCCT 443791 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 ||| ||||||||||| ||||| || ||||||| |||| | ||| || || | ||| || Sbjct 443714 AATACCTTCTTTATCCTGAATCTTAGCTTTTACATTTTCAATAGTATCCGAGGATTCTAC 443655 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | ||||| || || | ||||||||||| |||||||| Sbjct 443654 CTCAAGGGTAATTGTTTTACCCGTGAGGGTTTTTACAAAAATCTGCAT 443607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396198532193709