Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq2248 315 5e-81 >seq2248 Length=16282 Score = 315 bits (348), Expect = 5e-81 Identities = 836/1258 (66%), Gaps = 67/1258 (5%) Strand=Plus/Minus Query 68836 TCATC-TCGACTATGGCGTGATGATCAACCGTCTGATGTATCGCCGCCTGGTGCGCAACG 68894 ||||| |||| || |||||| | | ||| |||||||||| || ||||| ||| | Sbjct 1313 TCATCCTCGATTACGGCGTGCAGCTGAACAAGCTGATGTATCAGCGTCTGGT---CAAAG 1257 Query 68895 ---AAAACATTACGCTGTTCAGCCCACACGATGTGCCGGGCCTGTACGACGCGTTCTTTG 68951 || | || || || |||||||| || || || |||||||| |||||||| || | Sbjct 1256 GACAAGAAATCACCCTCTTCAGCCCTTCTGACGTACCCGGCCTGTATGACGCGTTTTTCG 1197 Query 68952 TTGATCAGGACAAGTTCGAAGAGCTGTACCTGAAGTACGAAGCCGACGAGAGCATCCGTA 69011 |||||||| |||||||| | || | | |||| ||| ||||| |||||||| | Sbjct 1196 CCGATCAGGATGAGTTCGAACGCTTATATCAGCAGTATGAAAAAGACGACAGCATCCGCA 1137 Query 69012 AGAAATCTATCCCGGCCGTCGACCTGTTCTCTACGCTGATGCAGGAGCGTGCCTCCACTG 69071 ||||||| || || ||||| |||||||| | ||||||| || || ||||| | | Sbjct 1136 AGAAATCCATGAAAGCGGTCGATCTGTTCTCACTGATGATGCAAGAACGCGCCTCTGCAG 1077 Query 69072 GTCGTGTTTATATTGCCAAC--GTCGACCACATGAACGATCACGGCGCATTCGTTCCGGA 69129 | ||| | || ||| |||| ||||| || ||| ||| || | || | ||| Sbjct 1076 GCCGTATCTACATT--CAACATGTCGATCATTGCAACACCCACAGCCCGTTTGAACCGAC 1019 Query 69130 AATTGCACCGGTACACCAGTCCAATCTCTGTATGGAGATCACGCTACCGACCAAGCCACT 69189 || |||||||| | ||| |||| || || |||| || |||| || ||| | || || Sbjct 1018 CATCGCACCGGTGCGTCAGCCCAACCTGTGCCTGGAAATTGCGCTGCCAACCCACCCTCT 959 Query 69190 GG----CGTTCACTGACGATCCGAACGGGGAAATCGCGCTTTGCACCCTGTCTGCGTTCA 69245 || ||| || ||||| || || || |||||||| |||||||| || ||||||| Sbjct 958 GGAAGACGTCAAC-GACGAA---AAAGGTGAGATCGCGCTCTGCACCCTCTCCGCGTTCA 903 Query 69246 ACCTGGGCGCGATCCGCACGCTGGACTCACTGAAAGACGTGGCGTTTTACGCTGTGGCGG 69305 |||| ||||| | | || || || |||| ||||| | || || | Sbjct 902 ACCTTGGCGCATTGAATAGCCTAGATGATTTGGAAGATTTGGCGCGTCTGGCAGTACGTG 843 Query 69306 CACTGGACTCTCTGCTCGACTATCAGGACTACCCTATGGCTGCTGCAGAAATCCCGGCTA 69365 |||||||| | ||| | |||||||| || ||||| || || || || | |||| Sbjct 842 CACTGGACGCCCTGTTGGACTATCAAGATTACCCGATTCTGGCCGCCAAACGCGGTGCTA 783 Query 69366 AAGCTCGTCGTAGTCTGGGTATTGGCGTGACCAACTTTGCTTACTATCTGGCGAAGAACG 69425 | || || | || || || ||||| | ||||||||| |||||||||||||| |||| Sbjct 782 TGGGCCGCCGCACGCTCGGCATCGGCGTTATCAACTTTGCCTACTATCTGGCGAAAAACG 723 Query 69426 GCTTTAACTACTCTGACGCTGCGGGCAACCAGCTGGTGCATGAGACCTTCGAAGCCATTC 69485 || | |||||| || | | |||| | ||| ||| ||||||| |||||||||| Sbjct 722 GCGTGCGCTACTCCGATGGCAGTGCCAACAATCTGACGCACAAGACCTTTGAAGCCATTC 663 Query 69486 AGTACTACCTGCTCGATGCGAGCTGC---CGA-CTGGCCGAAGCGA--AAGGTGCATGTG 69539 |||||||||||| ||| ||| | ||| ||||| |||| | ||||| || Sbjct 662 AGTACTACCTGC----TGCAAGCCTCAAACGAGCTGGC--GCGCGAACAGGGTGCCTGCC 609 Query 69540 ACTGGTTCTCCCACACCAAATACGCACAGGGCCAGCTGCCAGTCGACCACTATCGCAAAA 69599 ||||| ||| ||| || || | || |||||| | ||| ||| ||| Sbjct 608 CGTGGTTTGACCAAGCCACCTATGCCCGTGGAGTGCTGCCTATTGACACCTA----CAAA 553 Query 69600 CGCTGGATACCAACCCGGA-GACATCTTTCGAGCTGAA------AATGCCG--TGGGAAG 69650 ||| ||| | ||| | || ||| ||| ||| || || ||||||| Sbjct 552 CGC--GAT------CTGGACGGCA--TTTGCAGC-GAACCGTTGCATTACGATTGGGAAG 504 Query 69651 AGCTGCGTGGCCGTATCCGTGAGCATGGTCTGCGTAACTCAACTCTGACCGCTCAAATGC 69710 ||||| | | ||||| || |||||||||||||| || || | || |||| Sbjct 503 CACTGCGCGACAGTATCAAAACACACGGTCTGCGTAACTCCACGCTCTCTGCGTTGATGC 444 Query 69711 CGTGTGAGACGTCCAGCCAGATCACCAACTCCACCAATGGTATTGAGCCGCCCCGCGGCC 69770 ||| || || || || || ||||| ||||||| ||||| || || || ||||| | Sbjct 443 CGTCGGAAACCTCGTCACAAATTTCCAACGCCACCAACGGTATCGAACCACCACGCGGTC 384 Query 69771 ----CGGTATCCGTGAAGTCTTCCAAAGACGGCATCGTGAAGATGGTCGTTCCAGACTTC 69826 | ||||| ||| | || ||||||||||| || ||| || || || | | Sbjct 383 ACATCAGTATC----AAGGCGTCAAAAGACGGCATTTTGCGCCAGGTGGTGCCGGATTAC 328 Query 69827 GCTCAACTGAAAGACCAGTACGAGTACCTGTGGGATATGCCGGATAACCGCGGCTATCTG 69886 ||||| || ||||| | |||||||| |||||| | || |||||| ||| Sbjct 327 AAAACCCTGAAGGATGCCTACGAATTACTGTGGGAAATGCCGAACAATGACGGCTACCTG 268 Query 69887 --ACTAAGGTGGCCATCATTCAGAAGTTCTTCGATCAGGCCATCTCTGCGAACACCAACT 69944 ||| ||| | | || |||||||| |||||||||| || ||||| |||||||||| Sbjct 267 CAACT--GGTTGGGCTGATGCAGAAGTTTGTCGATCAGGCTATTTCTGCCAACACCAACT 210 Query 69945 ACGACCCGACTCGCTTCCCTGGCGACAAGGTTCCAATGATGAAGCTGCTGGAAGATCTGC 70004 |||| ||| | |||||||| | || || || |||| || ||||| || ||| Sbjct 209 ACGATCCGGCGCGCTTCCCGTCAGGAAAAGTGCCGATGAAACAGTTGCTGACTGACTTGC 150 Query 70005 TGTTTGCGTATCAGCAAGGTGTGAAGACGCTTTATTACCACAACACGCGTGATGGCGC 70062 | || ||| || || |||| ||||| ||||| || ||||| ||||| || || Sbjct 149 TTACCGCCTATAAGTTCGGGTTGAAAACGCTGTATTATCAAAACACCCGTGACGGTGC 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330365403185820