Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_019398.1
Length=178193
Score E
Sequences producing significant alignments: (Bits) Value
seq2248 95.1 1e-14
>seq2248
Length=16282
Score = 95.1 bits (104), Expect = 1e-14
Identities = 166/235 (71%), Gaps = 14/235 (6%)
Strand=Plus/Minus
Query 41094 CCTGGATTATGGCGTACAGCTTAACGATTTGATGTATAAGCGTTTAATCAATAACGATTA 41153
||| ||||| ||||| ||||| ||| | |||||||| ||||| | |||| | |
Sbjct 1309 CCTCGATTACGGCGTGCAGCTGAACAAGCTGATGTATCAGCGTCTGGTCAAAGGACAAGA 1250
Query 41154 CATCACTCTGTTCAGCCCT---GACGTTGCGAACGATCGCCTGTATGACGCGTTCTATCA 41210
||||| || ||||||||| ||||| | || |||||||||||||||| | ||
Sbjct 1249 AATCACCCTCTTCAGCCCTTCTGACGTACC---CG---GCCTGTATGACGCGTT-TTTC- 1198
Query 41211 AGCGGATCAGACTGAGTTTGAAGAACTGTAT-ACCAGTCTTGAAAAAGACCCAACGGTAC 41269
|| |||||| |||||| ||| | ||| | |||| |||||||||| | | |
Sbjct 1197 -GCCGATCAGGATGAGTTCGAACGCTTATATCAGCAGT-ATGAAAAAGACGACAGCATCC 1140
Query 41270 GCAAGAAACGCATCAAAGCGGTAGATCTGTTCCAGTTGCTTGTTCAGGAACGCGC 41324
|||||||| ||| |||||||| ||||||||| || | | || ||||||||
Sbjct 1139 GCAAGAAATCCATGAAAGCGGTCGATCTGTTCTCACTGATGATGCAAGAACGCGC 1085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569971755353560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |