Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019442.1 Length=60523 Score E Sequences producing significant alignments: (Bits) Value seq2192 219 2e-52 seq3892 190 8e-44 seq3409 181 4e-41 seq1599 138 4e-28 seq1577 123 1e-23 seq4809 114 5e-21 seq2784 93.3 2e-14 seq2617 84.2 8e-12 seq4482 82.4 3e-11 >seq2192 Length=16777 Score = 219 bits (242), Expect = 2e-52 Identities = 232/306 (76%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 14027 AGTTGTTTTTCCATGCGATCGAATTCAGCAATGTAGGCTTCCTTGAATGCAGCTGCTTTT 14086 || || | ||||||||| | || || |||||||| ||||||||||| || ||||||||| Sbjct 15637 AGCTGCTCTTCCATGCGGTTAAACTCCGCAATGTAAGCTTCCTTGAACGCTGCTGCTTTT 15696 Query 14087 TTGCCGGTGAAGCCCATCACCAGAAAAACGAAGCCGTTTTTGGTGATTTGGTACATTGGG 14146 ||||||||||||||||| || ||||||| |||||||| ||||| || ||||| || Sbjct 15697 TTGCCGGTGAAGCCCATGACGAGAAAAATGAAGCCGTCCTTGGTTATGGTATACATCGGT 15756 Query 14147 CGTTGTTCGCCTTTGGCGTCGGTGTAGGTAACGTCCTCAAAATTGAGGGCGTTAAATTTC 14206 ||| |||| || ||||||||| | |||||||||||||||| ||||||| Sbjct 15757 AGTTTGCGGCCTGTGCTGTCGGTGTATTCACTCACCTCAAAATTGAGGGCAGTAAATTTT 15816 Query 14207 TCTGAGCATTCAATATTTGCAATGGCGCGCAATACGTTATCGTGTCGCTTGCAAAAATAT 14266 || ||||| |||| | |||||| ||| |||||||||||||| |||||| ||| || Sbjct 15817 TCAGAGCAATCAAGGCGTTCAATGGTGCGTAATACGTTATCGTGACGCTTGTCAAAGTAA 15876 Query 14267 TCGGCAACGGCAAAGGACGTAGTAACAGCGCGACCATTGGAAATGGTGATTTCAGGTTGA 14326 || |||||| | || || ||||| ||||| ||||||| || |||| || ||| | Sbjct 15877 TCAGCAACGTCCAATGATGTAGTTACAGCTTTACCATTGCGGATAGTGACTTTGGGTGCA 15936 Query 14327 GAAAGG 14332 | |||| Sbjct 15937 GCAAGG 15942 >seq3892 Length=6556 Score = 190 bits (210), Expect = 8e-44 Identities = 225/305 (74%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 4293 TTCTTTTCGCACTCGATGAAGTATCGGCGGATCTGGCGGCCTTTTTCGTTACGCTCAACC 4352 ||||| || || ||||||||||| || || | ||| ||||||| ||||| ||||||||| Sbjct 3490 TTCTTCTCACATTCGATGAAGTAGCGTCGCACCTGACGGCCTTGCTCGTTGCGCTCAACC 3431 Query 4353 ATCGCCAGTTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGCGGCGGCCTGGA 4412 |||||||||||||| || |||||||||||||| ||||| ||||| | ||| || || | Sbjct 3430 ATCGCCAGTTCTTTAGCAGTGTCGAGGGTGAGCTGGTAGTCCTTTCTGCGACGCCCGACA 3371 Query 4413 GTTTTCGCCAAATTTGGCGAAAATAGAATGTAGTCTAAATTTTCTACGAATCCATACTCG 4472 ||||||||| ||| ||||||||||| |||||||||| |||| | || || ||||| Sbjct 3370 GTTTTCGCCGAATCTGGCGAAAATACGATGTAGTCTAGATTTGCGGTAAACCCGTACTCT 3311 Query 4473 TTTAGCCTGGCCCGTATCCAGTTAGAAAAATCTTTACCTACCTCTAAAAATCCATGCAAA 4532 | | | || |||||||| ||||| || ||||| | ||||| ||| | | Sbjct 3310 GAAATTCGCTCACGAATCCAGTTGGAAAAGTCGCGGCCTACATTCAAAAAAGTATGAAGA 3251 Query 4533 TCACGCGCGTTCACCAGAAGCGTAGGTTCATTTGAGATTGTACCTTCAAACACAGGGATG 4592 || || || || ||||| | | || |||| || || || | ||| ||||||||| Sbjct 3250 TCGCGAGCATTACAAAGAAGAATGGAATCGTTTGCAATGGTGCCATTAAAAACAGGGATG 3191 Query 4593 AGTTG 4597 || || Sbjct 3190 AGCTG 3186 >seq3409 Length=8325 Score = 181 bits (200), Expect = 4e-41 Identities = 271/382 (71%), Gaps = 2/382 (1%) Strand=Plus/Plus Query 29144 GCATACCGTGATGGTGCGGGTATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGATGGT 29203 || || | ||| || | || |||||||| || ||| |||| | || ||||| ||||| Sbjct 3032 GCTTATCCTGACGGCGGCGGCATCTGGACGATTTGCGGTGGCGTGACACGGGTAGATGGC 3091 Query 29204 AAGCCTGTTATTCCTGGCATGAAGCTGTCGAAGGGGAAATGCGACCAGGTTAACGCCATT 29263 ||||| || | |||||||||||| | ||| | || | || || | ||| Sbjct 3092 AAGCCGGTAGTGAAGGGCATGAAGCTGACCGCCGGGCAGTGTGCAAAGATTGATGCCGCA 3151 Query 29264 GAGCGTGATAAGGCGCTGGCATGGGTGGAGAAAAACATCAAAGTGCCACTGACTGAACCC 29323 || | | |||||||| | |||||||| ||| | |||||||| || ||||| | Sbjct 3152 GAACAGCAAAAGGCGCTCGATTGGGTGGATCGCAACGTTAAAGTGCCGCTCACTGAGACT 3211 Query 29324 CAGAAAGCGGGTATTGCGTCATTCTGTCCTTACAACATTGGCCCAGGTAAGTGTTTCCCG 29383 ||||||| || ||||| ||||| ||||| | || || || || ||||| || ||| | Sbjct 3212 CAGAAAGTCGGCATTGCCTCATTTTGTCCGTGGAATATCGGTCCCGGTAACTGCTTCACC 3271 Query 29384 TCGACGTTTTATAAACGAATT-AATGCAGGAGATCGAAAAGGTGCCTGCGAAGCGATTCG 29442 || ||||| || | |||| ||||| || |||| | ||||||||| ||| |||| Sbjct 3272 TCAACGTTCTACCG-CAAATTGAATGCCGGCGATCTCATTGGTGCCTGCAAAGAGATTAA 3330 Query 29443 CTGGTGGATTAAGGACGGTGGCAGAGACTGCCGTATTCGCTCAAATAACTGTTATGGTCA 29502 | |||||| |||||| |||| ||| |||||||| ||| | ||||||||||| || || Sbjct 3331 GCGCTGGATTTGGGACGGAGGCAAAGATTGCCGTATCCGCGCCAATAACTGTTACGGGCA 3390 Query 29503 GGTCTCACGGCGTGACCAGGAG 29524 | | | ||||||||||||||| Sbjct 3391 GATAGCGCGGCGTGACCAGGAG 3412 Score = 123 bits (136), Expect = 1e-23 Identities = 129/164 (79%), Gaps = 8/164 (5%) Strand=Plus/Minus Query 5130 TGACTGGTCATGATGACCTCCTTTGAAGTTTTAGTTAGCAATCACCAGTTAGTGGCTGGT 5189 ||||| | ||| | | ||||||| ||||| |||| | || |||||||||| |||||| Sbjct 1109 TGACTTGGCATAAAG-CCTCCTTACTAGTTT-AGTTT-CGATTACCAGTTAGTAGCTGGT 1053 Query 5190 GATCGGGTGTCAACTAGAGCCTTCAAAGATGCTCCGGGCATATTCCCCTTGCGGGTATTG 5249 |||| ||||||| ||| || ||| ||| |||||||||||||||||| |||||| Sbjct 1052 AGCCGGGCGTCAACT-GAGTCTAGTAAGCAACTCTGGGCATATTCCCCTTGCGAGTATTG 994 Query 5250 TATTACGCCTCTCCACCCGACCTTTGTACGGATGTGACTATGCC 5293 ||||||||||||||||||| |||| ||||||||| || ||| Sbjct 993 TATTACGCCTCTCCACCCGGCCTT----CGGATGTGATTACGCC 954 >seq1599 Length=30855 Score = 138 bits (152), Expect = 4e-28 Identities = 139/178 (78%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 4295 CTTTTCGCACTCGATGAAGTATCGGCGGATCTGGCGGCCTTTTTCGTTACGCTCAACCAT 4354 |||||| ||||| |||||||| ||||| | ||| |||||||| ||||| |||| ||||| Sbjct 20322 CTTTTCACACTCAATGAAGTAACGGCGAACCTGACGGCCTTTGTCGTTGTGCTCCACCAT 20263 Query 4355 CGCCAGTTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGCGGCGGCCTGGAGT 4414 |||||||||||||||||||| |||||||||||||| ||||| | || || || || Sbjct 20262 TGCCAGTTCTTTGGCTGTGTCCAGGGTGAGGTGGTAGTCCTTTCTGCCTCGTCCGTGACC 20203 Query 4415 TTTCGCCAAATTTGGCGAAAATAG-AATGTAGTCTAAATTTTCTACGAATCCATACTC 4471 | | || ||| | | |||||| |||||||| |||||| ||||| ||| |||| Sbjct 20202 TATTTCCCGATTCTG-GGAAATAGCTATGTAGTCCTGATTTTCAACGAAACCAAACTC 20146 >seq1577 Length=31499 Score = 123 bits (136), Expect = 1e-23 Identities = 226/328 (69%), Gaps = 16/328 (5%) Strand=Plus/Plus Query 4293 TTCTTTTCGCACTCGATGAAGTATCGGCGGATCTGGCGGCCTTTTTCGTTACGCTCAACC 4352 ||||| || || ||||||||||| || || | ||| ||||||| ||||| ||||||||| Sbjct 21929 TTCTTCTCACATTCGATGAAGTAGCGTCGCACCTGACGGCCTTGCTCGTTGCGCTCAACC 21988 Query 4353 ATCGCCAGTTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGC------GGCGG 4406 |||||||| ||||| ||||||| |||||||| ||||| ||||||| | | Sbjct 21989 ATCGCCAGCTCTTTTGCTGTGTTCAGGGTGAGATGGTAGTCCTTGCTTCTTCTATCTCCA 22048 Query 4407 CCTGGAGT-------TTTCGCCAAATTTGGCGAAAATAGAATGTAGTCTAAATTTTCTAC 4459 ||| | || ||| || | |||| | || | ||||||||| ||||| | Sbjct 22049 CCTCGTGTATTTTTGATTCCCCCACTTTGATG-AACCAAAATGTAGTCCGCGTTTTCGAT 22107 Query 4460 GAATCCATACTCGTTTAGCCTGGCCCGTATCCAGTTAGAAAAATCTTTACCTACCTCTAA 4519 |||||| |||||| | | | | | ||||| | |||||||| | || || | Sbjct 22108 GAATCCGTACTCGGTAACGCGGTTCTTAATCCATGTTGAAAAATCACGGCGAACATCGAG 22167 Query 4520 AAATCCATGCAAATCACGCGCGTTCAC-CAGAAGCGTAGGTTCATTTGAGATTGTACCTT 4578 ||| |||||| | |||||| |||| ||| || || | ||| || || || || || | Sbjct 22168 GAATTCATGCAGCTTACGCGC-ATCACACAGTAGAGTTGCTTCGTTGGAAATAGTGCCGT 22226 Query 4579 CAAACACAGGGATGAGTTGAGTGGTCAT 4606 || || ||||| || ||| ||||||| Sbjct 22227 TGAAAACGGGGATAAGCTGATTGGTCAT 22254 Score = 82.4 bits (90), Expect = 3e-11 Identities = 107/144 (74%), Gaps = 7/144 (5%) Strand=Plus/Plus Query 13522 GCGGGCATATTCCCATTGCTGGTATTGTATTAGCCGCACGCCCGGTCATAAACCAAGAAG 13581 |||||| ||||||| || | ||| || |||| ||| ||| | ||| |||| || | Sbjct 22326 GCGGGCTTATTCCCTTTTCAGGTCTTTTATTCGCC-CACACTCGGCCATATCTGAAATA- 22383 Query 13582 ACTGGACACaaaaaaaCCGCATGTCTGTCGGGCGCGGTAACCGCTACTTGCTAAGGCGTT 13641 ||||| |||||| |||||||||||||||| ||||| ||||||| | |||| ||| Sbjct 22384 --TGGACGTAAAAAATCCGCATGTCTGTCGGGTGCGGTTTCCGCTAC--GAAAAGGTGTT 22439 Query 13642 TTGAGCACCATGAGGCAGAATATA 13665 || |||||| || || || |||| Sbjct 22440 TTCAGCACC-TGTAGCGGACTATA 22462 >seq4809 Length=3389 Score = 114 bits (126), Expect = 5e-21 Identities = 213/305 (70%), Gaps = 17/305 (6%) Strand=Plus/Minus Query 13101 TGAAATAGCAGTCTTCCAGTTTTTCGAACACTTCCCACGCCCGATCGGTTTCGAGCATTT 13160 |||| || || |||| ||| | ||||| |||||||| | |||||||||||||||| | Sbjct 1113 TGAAGTAACAATCTTTCAGCTGCTCGAATACTTCCCATTCTTGATCGGTTTCGAGCATCT 1054 Query 13161 TTGCGTGACGGGCTGCGCCGCGTTCTGTCCAGAGGATGAGGGAGCGAACGTTACGGGCGA 13220 | || || | || || ||||| ||||||||||| ||||| |||| ||| ||| || Sbjct 1053 TGGCATGCCTAGCGGCTCCGCGCTCTGTCCAGAGAATGAGACTGCGA--GTTTTGGGTGA 996 Query 13221 TTTTCACAGAAGGTCTTAAAGACATGCTGTGCTTAAATTCCC---GCAACTCCTCATTCT 13277 | || || | |||||||||||| || || ||||| | | | | | || | Sbjct 995 TATTTGCA-AGTGTCTTAAAGACA--CT---CTCAAATTATCAAGGTCAGTTCCGGTTGT 942 Query 13278 CAAGTAAAAAGTAGTGCTTACCGATAACAAATCGTCCAGAATTCCGATTGAAATTTTTTC 13337 ||||||| ||||| || ||| || || ||| ||| || ||| |||||| | Sbjct 941 TTTGTAAAAA----TGCTTGCCATCAACGAACCGATCAGCATTACGGTTGTGATTTTTGC 886 Query 13338 GGATGTAATCTGGTTCTGTGCCATATAAGCT-GGCAAGAAGCTCTGTAGTCACCACAGGT 13396 |||| | |||| |||||||| || ||||| || | |||||| ||||| | ||||| Sbjct 885 GGATTCTAACTGGCTCTGTGCCGTA-AAGCTCAGCTAAAAGCTCAGTAGTAATAACAGGA 827 Query 13397 ATATT 13401 ||||| Sbjct 826 ATATT 822 >seq2784 Length=12453 Score = 93.3 bits (102), Expect = 2e-14 Identities = 144/202 (71%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 18190 ACAGCGCTTTGGGTAACACCTAATTCATAGGCTAATGATTCCTGCGACAGGCCTAACTCT 18249 ||| ||||||| | | ||||| |||| ||||| || || || || | ||||| |||| Sbjct 6291 ACACCGCTTTGCCTCATACCTAGCTCATGGGCTATAGACTCTTGTGAAAAGCCTAGCTCT 6232 Query 18250 TTCTT-TTTAGCGTTAAAAATACTTTTCAGACGCTTGGCGTCTTCCAGTTGCTCAGGGGT 18308 || || |||| | | |||||| || || || | | | || ||||| || || ||||| | Sbjct 6231 TTTTTCTTTAAC-TCAAAAATGCTCTTGAGCCTCATCGCATCTTCAAGCTGTTCAGGACT 6173 Query 18309 TAACGGTTTCTTTTTCATGTTCATACCATATCACCTTTGGTTATATGTAATGAAATATCT 18368 ||| | |||||||||||| | | | |||||||| | | |||| || ||| | Sbjct 6172 TAATGTTTTCTTTTTCATATAAAAATGATATCACCAATTGGAATAT-CAAACAAAAACAG 6114 Query 18369 GCGGTGTTGACATTTTAATAAC 18390 |||||||||| | |||||||| Sbjct 6113 ACGGTGTTGACTTATTAATAAC 6092 >seq2617 Length=13952 Score = 84.2 bits (92), Expect = 8e-12 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 29099 ATCCTCGACCAGTTTCTGGATGAAAAGGAAGGCAACCACACCACGGCATACCGTGATGGT 29158 || || |||| ||||| |||||||| || |||||||| | ||||||| |||||| Sbjct 3378 ATTCTTGACCGATTTCTTGATGAAAAAGAGGGCAACCATTTAATTGCATACCCAGATGGT 3319 Query 29159 GCGGGTATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTTATTCCT 29218 | ||| | ||||| || ||| |||| | || ||||| ||||| ||||| || | Sbjct 3318 GGTGGTGTATGGACGATTTGCGGTGGTGTAACGCGGGTAGATGGAAAGCCGGTAGTGAAG 3259 Query 29219 GGCATGAAGCTGTCGAAGGGGAAATGCGACCAGGTTAACGCCATTGAGCGTGATAAGGCG 29278 |||||||||||| | | | | |||| | ||| | ||||| |||| | |||||| Sbjct 3258 GGCATGAAGCTGACCGCTGAGCAGTGCGCAAAAGTTGATGCCATAGAGCAGAAAAAGGCG 3199 Query 29279 C 29279 | Sbjct 3198 C 3198 >seq4482 Length=5216 Score = 82.4 bits (90), Expect = 3e-11 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 14035 TTCCATGCGATCGAATTCAGCAATGTAGGCTTCCTTGAATGCAGCTGCTTTTTTGCCGGT 14094 ||||||||| | || || || ||||| ||||||||||| | ||||| ||||||||||| Sbjct 1307 TTCCATGCGGTTAAACTCCGCGATGTAAGCTTCCTTGAACACTGCTGCCTTTTTGCCGGT 1366 Query 14095 GAAGCCCATCAC-CAGAAAAACGAAGCCGT 14123 ||||||||| || || || ||||| |||| Sbjct 1367 GAAGCCCATAACGAAGGAAGACGAAACCGT 1396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193513990863090