Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq2617 104 7e-18 seq6242 96.9 1e-15 seq6037 87.8 5e-13 >seq2617 Length=13952 Score = 104 bits (114), Expect = 7e-18 Identities = 137/181 (76%), Gaps = 7/181 (4%) Strand=Plus/Minus Query 34164 TTGGTGGTGAACTGTGCAGGGTTGGCGTAACCGGCTAA-AAGGACCCGGCGCACCTTTCG 34222 |||| ||||||||| ||||||| ||||||||| |||||||||||| |||| || Sbjct 1380 TTGGCGGTGAACTGAATAGGGTTGAGACTACCGGCTAACAAGGACCCGGCGAGCCTTGCG 1321 Query 34223 GTGCCCCCACACAGCCCACCATAATACGAATGTGGCCGTGCTATACGCATaaaaaaaC-C 34281 | |||||| ||||||||||| || | || ||| || || |||||||||||||| | Sbjct 1320 GCTCCCCCATCCAGCCCACCATTATTCTGATATGG-CGGACT-GACGCATAAAAAAACAC 1263 Query 34282 GCT-TGCGCGGTGAATGCGCCTT-TTAGTAATCCGGGACGCCAATCCCGGCA-CTGGATT 34338 ||| | ||| ||||||||| ||||| ||||||| ||| ||||||| ||| ||| Sbjct 1262 GCTGTAGGCGTGTTATGCGCCTTGTTAGTTATCCGGGGTCTCAAACCCGGCACCTGAATT 1203 Query 34339 T 34339 | Sbjct 1202 T 1202 >seq6242 Length=2873 Score = 96.9 bits (106), Expect = 1e-15 Identities = 157/213 (74%), Gaps = 16/213 (8%) Strand=Plus/Plus Query 34164 TTGGTGGTGAACTGTGCAGGGTTGGCGTAAC---CGGCTAAA-AGGA--CCCGGCGCACC 34217 |||| ||||| ||| ||||||| || ||| |||||||| |||| ||||||| || Sbjct 1567 TTGGCGGTGAGCTGAACAGGGTT--CGAAACTACCGGCTAAACAGGAGACCCGGCGAGCC 1624 Query 34218 TTTCGGTGCCCCCACACAGCCCACCATAATACGAATGTGGCCGTGCTATACGCATaaaaa 34277 || ||| |||||| ||||||||||| || | || |||| | | ||||||||||| Sbjct 1625 TTGCGGCTCCCCCATCCAGCCCACCATTATTCAGATATGGCGGACC--GACGCATAAAAA 1682 Query 34278 aaC-CGCT-TGCGCGGTGAATGCGCCT-TTTAGTAATCC-GGGACGCCAATCCCGGCACT 34333 ||| |||| | ||| |||||||| |||||| |||| ||| | ||||||||||| Sbjct 1683 AACACGCTGTAGGCGTGTTATGCGCCTGTTTAGTTATCCGGGGTTTCGAATCCCGGCACC 1742 Query 34334 GGATTTTTCCAGTGCCCGATT-ACTATGGCACA 34365 |||||| | ||| | |||| ||||| || || Sbjct 1743 TGATTTTGCAGGTG-CAGATTGACTATAGCGCA 1774 >seq6037 Length=3259 Score = 87.8 bits (96), Expect = 5e-13 Identities = 221/334 (66%), Gaps = 18/334 (5%) Strand=Plus/Minus Query 11164 AATGGCTAAATCAGCAGCAGAGCGCAAAGCCGCTCAGAGAGCCAGACAAGCTGCATCTGG 11223 |||| ||||||| ||||||| || |||||||| ||| | | || |||| Sbjct 2426 AATGCCTAAATCCCCAGCAGAACGTAAAGCCGCCCAGCGGG-------AGG-----CTGG 2379 Query 11224 TGTGCGTAAGATGGAGATTGTGCTTGATGCTCAGGAAATTGAAATGCTAGAGCGTAACTG 11283 || ||| | || || || ||| |||||||| | || ||||| || ||||| Sbjct 2378 CGTAACAAAGTTTGAACTTAACCTCGATACTCAGGAACTGGACATGCTGCGCCGGAACTG 2319 Query 11284 TGCCACGCGTCGCCCCGGGCGTGCGCCTTACGAATTTGGTGAGTATATAGCGTCACTGAT 11343 || || || || || | ||| ||||| | | |||||||| || ||||| Sbjct 2318 CGCTGTACGGCGACCAGGCAAAGAGCCCTACGACATGGACGAGTATATCCAGTTGCTGAT 2259 Query 11344 CCGCCAGGATGATGCACGCGTGCGCGGGCGTATAAAATCGATCAGCAGAAAACGTTGCGG 11403 |||| |||| || || | ||||| ||| || |||||| |||||| |||||||||| Sbjct 2258 CCGCTAGGACGACGCCAGAGTGCGACAGCGGATTAAATCGCTCAGCAAGCAACGTTGCGG 2199 Query 11404 TAAGTGCGGCGAGAGAGTTCCAGTTA---ATTCATGCCCGTGCAATGGTGACTCGCAATG 11460 ||| || |||||| | | || || | | | || | ||| | |||||||| |||| Sbjct 2198 TAAATGTGGCGAGTCATTGCCCGTCACAGAGTGTTG--CATGC-AGGGTGACTCTGAATG 2142 Query 11461 CTGGGTGACTAAAGGCTGGCATGAAACGAAATTA 11494 |||| || | || |||||||||| ||| || Sbjct 2141 CTGGAACACAAGCGGATGGCATGAAATCAAACTA 2108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143159081345124