Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq33 87.8 3e-12 >seq33 Length=2490231 Score = 87.8 bits (96), Expect = 3e-12 Identities = 114/154 (74%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 25585 TTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTG 25644 ||||||| ||| ||||| |||||||| ||||||||||| || || || || || | Sbjct 181516 TTTCTCATGTA----TTGGCTTTCTTTGCTGCCTCTGATGGAATTGTTAATGAAAACTTA 181571 Query 25645 TGCGAGAGATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAG-TGTTTCTACGGTTTCC 25702 ||||| || | ||||| || ||| || || |||| ||||| |||||||||| Sbjct 181572 GTTGAGAGGTTTAGTCAAGAAGTTCAAGTAACTGAAG--CAAGATGTTTTTACGGTTTCC 181629 Query 25703 AGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736 | || || || |||||||| ||||||||| |||| Sbjct 181630 AAATTGCAATGGAAAATGTTCACTCTGAGATGTA 181663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928652796169280