Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq33 87.8 3e-12
>seq33
Length=2490231
Score = 87.8 bits (96), Expect = 3e-12
Identities = 114/154 (74%), Gaps = 8/154 (5%)
Strand=Plus/Plus
Query 25585 TTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTG 25644
||||||| ||| ||||| |||||||| ||||||||||| || || || || || |
Sbjct 181516 TTTCTCATGTA----TTGGCTTTCTTTGCTGCCTCTGATGGAATTGTTAATGAAAACTTA 181571
Query 25645 TGCGAGAGATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAG-TGTTTCTACGGTTTCC 25702
||||| || | ||||| || ||| || || |||| ||||| ||||||||||
Sbjct 181572 GTTGAGAGGTTTAGTCAAGAAGTTCAAGTAACTGAAG--CAAGATGTTTTTACGGTTTCC 181629
Query 25703 AGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736
| || || || |||||||| ||||||||| ||||
Sbjct 181630 AAATTGCAATGGAAAATGTTCACTCTGAGATGTA 181663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928652796169280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |