Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq3409 452 1e-122 seq6037 259 1e-64 seq2784 224 3e-54 seq2617 136 1e-27 seq2 98.7 3e-16 >seq3409 Length=8325 Score = 452 bits (500), Expect = 1e-122 Identities = 408/513 (80%), Gaps = 0/513 (0%) Strand=Plus/Plus Query 20230 AAACTTAGCGCCGCAATGCTGGCTCTGATTGCTGCTGGCGCGTCAGCTCCCGTTCTTATG 20289 ||||| || || ||||||||||| || || |||||||||| | | |||||||| | ||| Sbjct 2933 AAACTCAGTGCGGCAATGCTGGCGCTCATCGCTGCTGGCGTGACTGCTCCCGTGATGATG 2992 Query 20290 GCTCAGTTTCAGCAAGAAAAAGAGGGCGTGCGGCTGGTGGCTTACCCAGACGGCGGCGGA 20349 || || || ||| ||||||||||| |||| | ||||| || ||||||||||| Sbjct 2993 GCGCAATTCCAGACTGAAAAAGAGGGGATGCGTATAAACGCTTATCCTGACGGCGGCGGC 3052 Query 20350 ATCTGGACTATTTGCGGCGGTGTAACTCGCGTTGACGGTAAGCCGGTAGTAAAAGGTATG 20409 |||||||| |||||||| || || || || || || || ||||||||||| || || ||| Sbjct 3053 ATCTGGACGATTTGCGGTGGCGTGACACGGGTAGATGGCAAGCCGGTAGTGAAGGGCATG 3112 Query 20410 AAGTTGACCGCCGAGCAGTGCGCGAAGATTGATGCTCTGGAGCAGAAAAAGGCGCTCGAC 20469 ||| ||||||||| |||||| || ||||||||||| || ||| ||||||||||||| Sbjct 3113 AAGCTGACCGCCGGGCAGTGTGCAAAGATTGATGCCGCAGAACAGCAAAAGGCGCTCGAT 3172 Query 20470 TGGGTGGATCGTAACGTTAAAGTGCCACTCACCGAACCTCAGAAGACAGGGATAGCGTCG 20529 ||||||||||| |||||||||||||| ||||| || ||||||| || || || || Sbjct 3173 TGGGTGGATCGCAACGTTAAAGTGCCGCTCACTGAGACTCAGAAAGTCGGCATTGCCTCA 3232 Query 20530 TTCTGCCCGTGGAATATCGGTCCGGGGCGCTGTTTCCCGTCCACGTTCTACCGCAAATTA 20589 || || ||||||||||||||||| || ||| ||| | || ||||||||||||||||| Sbjct 3233 TTTTGTCCGTGGAATATCGGTCCCGGTAACTGCTTCACCTCAACGTTCTACCGCAAATTG 3292 Query 20590 AATGCTGGTGACCGCATCGGCGCTTGCCGCGAGATTAAACGCTGGATTTGGGATGGTGGC 20649 ||||| || || | ||| || || ||| |||||||| |||||||||||||| || ||| Sbjct 3293 AATGCCGGCGATCTCATTGGTGCCTGCAAAGAGATTAAGCGCTGGATTTGGGACGGAGGC 3352 Query 20650 CGCGATTGCCGCATACGCTCAAATAACTGTTACGGGCAAATAGAACGCCGTGACCAGGAA 20709 |||||||| || ||| | ||||||||||||||||| |||| || ||||||||||| Sbjct 3353 AAAGATTGCCGTATCCGCGCCAATAACTGTTACGGGCAGATAGCGCGGCGTGACCAGGAG 3412 Query 20710 GCGGAATTATCGTGCTGGGGATTGGACGGATGA 20742 |||||||||||||||||||| ||| || |||| Sbjct 3413 GCGGAATTATCGTGCTGGGGGCTGGGCGCATGA 3445 >seq6037 Length=3259 Score = 259 bits (286), Expect = 1e-64 Identities = 629/935 (67%), Gaps = 27/935 (3%) Strand=Plus/Minus Query 15041 CGGACTGAACACCCGATAACCCAAACAAAGCAACTGCGCCATTACTGAGGATAGGTAATG 15100 |||| |||||||||| |||||||| | |||||| || | | ||| | ||| Sbjct 1814 CGGATTGAACACCCGGCAACCCAAATTA-----CTGCGCTATCAGGG-GGAACG---ATG 1764 Query 15101 GCACAGCACTCATTTGTAAAGTCAGCTGGTGGAATATTAATTCCCGCCACGCCTGATTCT 15160 || ||| | |||||| ||| || |||||||||||| | || |||||||| || ||||| Sbjct 1763 GCGCAGTATTCATTTACAAAATCTGCTGGTGGAATACTGATACCCGCCACACCGGATTCA 1704 Query 15161 AACGAGTTCGTCAAGAAGCTAAA-GACGGGCGCGGTTATTTATGCCGATTTCAAGCAGGC 15219 || || || | ||| | |||| | |||| || ||| | | ||||||| ||| ||||| Sbjct 1703 AAAGATTTTATTCAGAGGATAAAAGTCGGG-GCCGTTGTCTCTGCCGATATCAGGCAGGT 1645 Query 15220 GCGGAACGCGGCATTCCATCGCAAATTCTTTTCACTCCTAAACCTCGGCTTTCACTACTT 15279 | ||| |||| || || ||||| || |||||||| || |||||||| || | |||| Sbjct 1644 CAGAAACCCGGCTTTTCACCGCAAGTTTTTTTCACTGCTTAACCTCGGTTTCGAATACTG 1585 Query 15280 TGAACCGGATGGCGGCGCTATATCTCCAGCCGATAAAGCCCTCGTAAATGGCTTTGTAAA 15339 ||||| ||||| || ||||| || | || ||| || || |||| || Sbjct 1584 GCAACCGACAGGCGGGGCCATATCCCCGACAGAAAAAAAACTGATACGCGGCTACGTTCG 1525 Query 15340 GTGGATTGCTTATTATGCAGGCCATGAGGGGACG-ATT-CAGGAGTTAGCGAATCAATAT 15397 | | ||| | | |||||| | | | |||| ||| |||| || || |||| Sbjct 1524 TTTTCTCGCTCACTTTGCAGG--AAGCGAAGACGCATTACAGGCCGCTGCTGATGAATAC 1467 Query 15398 CTCAGTGATACTGCACAGAAACGAGCAGTAAACATTACAGCTGTTAAATCATTCGAGTCG 15457 || | || || | ||||| || | ||| || | | || ||||||||||| | Sbjct 1466 CTGAATGGCGTAGCCAAAAAACGCGCTGCAAATATCAGCACGGTAAAATCATTCGAAGCA 1407 Query 15458 TTCAGATCGTGGGTGACGATTGAAGCAGG--ATT-CTACGT-TACGTTTTATATGCCTGA 15513 ||| | |||||||| || || | || ||| | | || |||| | |||| || Sbjct 1406 TTCCGCCGCTGGGTGACTATCGAGTCCGGCCATTACGAAGTATACG----AGCTGCCAGA 1351 Query 15514 CGGCACCAGGCGCAACGAGCCTGAGTCAATCAAGTTTTCAAAAATGGATGATCT-GAAGT 15572 ||| | | || ||| ||||| || || ||| |||||||||| || | ||| | Sbjct 1350 CGGTAGCCTGCACAAAGAGCCGCGATCGATATCGTTCGCAAAAATGGAAGAAATCGAATT 1291 Query 15573 TCGGCGAGCTCTACAAAGCGGTGCTAAACGTCCTCTGGAATTACATCCTCTATCGTACAT 15632 || || || |||||||| || | || ||||||| | |||||| | || | Sbjct 1290 TCA-CGCCCTGTACAAAGCCACACTGGATGTTCTCTGGACATTCATCCTGTCAAAAACCT 1232 Query 15633 TCCCTACCCAGCAGGCAGCAGAAAACGCCGCCGCTCAGTTGCTGGAGTATGCAGCATGAA 15692 | ||||||||||| ||||||| ||||||||||| ||| | |||||| || |||||| Sbjct 1231 TTCCTACCCAGCAATCAGCAGAGAACGCCGCCGCCCAGCTTATGGAGTTCGCCGCATGAC 1172 Query 15693 AAACCTGCGTAAAGAAGCCCGCAACAGAGAATGCCAGGTGCGGATGCCGGGTATCTGCAA 15752 || | ||||| ||| | | | || || ||| | || || || || ||||||| Sbjct 1171 GGACTTCAAAAAAGAGGCCAGAGGCCGCGACTGTCAGATCCGTATTCCCGGCGTCTGCAA 1112 Query 15753 TCACAATTCTGAAACCACAGTGTTAGCACATTACCGTCTTGCAGGA-ACCTGCGGCACTG 15811 | ||| | ||||| || || || | |||||||| | || ||| ||||| |||| | Sbjct 1111 TTTCAACCCGGAAACTACCGTACTAACGCATTACCG-CATGTCGGACACCTGTGGCATGG 1053 Query 15812 GAATTAAACCCCCTGATATTCAAGGTGCATGGGCGTGTAGCGCGTGCCATGACGAAATCG 15871 |||| |||| | ||| |||| ||||||| ||||| || |||||||||||| | | Sbjct 1052 GAATAAAACTCGATGACCGCCAAGCAGCATGGGGCTGTAGTGCATGCCATGACGAAGTAG 993 Query 15872 ATCGCAGAACCAGACACATCGACACAGAAACGGCACGCCTTTGCCACGCTGAAGGGGTGA 15931 ||| | | || ||||| || | || || ||||| |||| ||||| |||||||| | Sbjct 992 ATCACCGTACACATCACATTGATTCGGATACAGCACGGCTTTATCACGCAGAAGGGGTAA 933 Query 15932 TGAGGACACTAAACATTCTAATATCTGAGGGGAAA 15966 |||| |||| | | ||||| ||||||||| Sbjct 932 TGAGAACACAAGCGGTACTAATCGAAGAGGGGAAA 898 Score = 223 bits (246), Expect = 1e-53 Identities = 233/304 (77%), Gaps = 3/304 (1%) Strand=Plus/Minus Query 14632 AGCACAACGTAAG--CGCC-AGCGGGAGGCTGGCGTAACAAAACTGGAATTGAATCTGGA 14688 |||| ||||||| |||| |||||||||||||||||||||| | ||| | || || || Sbjct 2411 AGCAGAACGTAAAGCCGCCCAGCGGGAGGCTGGCGTAACAAAGTTTGAACTTAACCTCGA 2352 Query 14689 TGCTCAGGAACTGGAAATGCTGCGCCGGAATTGTGCTGCGCGGCGACCAGGCAAAGAGCC 14748 | ||||||||||||| |||||||||||||| || |||| |||||||||||||||||||| Sbjct 2351 TACTCAGGAACTGGACATGCTGCGCCGGAACTGCGCTGTACGGCGACCAGGCAAAGAGCC 2292 Query 14749 ATACGATATGGACGAGTATATCCAGATGCTGATCCGTCAGGATGATGCGCGCGTGCGCCA 14808 ||||| |||||||||||||||||| |||||||||| |||| || || | ||||| || Sbjct 2291 CTACGACATGGACGAGTATATCCAGTTGCTGATCCGCTAGGACGACGCCAGAGTGCGACA 2232 Query 14809 AAAAATAAAGGCGATCGGTCATCGTATTTGCGGGAAATGCGGTGAGTCTTTGCCAGTGGA 14868 || || || || | | | |||||| ||||| || ||||| ||||| || Sbjct 2231 GCGGATTAAATCGCTCAGCAAGCAACGTTGCGGTAAATGTGGCGAGTCATTGCCCGTCAC 2172 Query 14869 TTCATGCTGCATGACTGGCGACTCTGCGTGCTGGAATACCAGTGGCTGGCACGAAATGAA 14928 || |||||| || ||||||| |||||||| || || || ||||| ||||| || Sbjct 2171 AGAGTGTTGCATGCAGGGTGACTCTGAATGCTGGAACACAAGCGGATGGCATGAAATCAA 2112 Query 14929 ATTA 14932 | || Sbjct 2111 ACTA 2108 >seq2784 Length=12453 Score = 224 bits (248), Expect = 3e-54 Identities = 323/450 (72%), Gaps = 4/450 (1%) Strand=Plus/Minus Query 11975 CGCAGATTTTAGATATGTGCTGTGGCAGCCGTATGTTCTGGCGTGACAAACGCGATCCGC 12034 ||||| | | ||||||||||| ||| || ||||||||| ||||| | ||| | Sbjct 5278 CGCAGGTACTGGATATGTGCTGCGGCTCTCGCATGTTCTGGTTCGACAAGCAAGATAAAC 5219 Query 12035 GCGCGGTGTTTATGGATAACCGCAGCGAACAGCACACACTGTGCGACGGCCGCAGCCTGG 12094 | || ||||| | |||| |||||||| | ||||| |||||||| || | | || Sbjct 5218 GAGCTGTGTTCACCGATATTCGCAGCGAGAACCACACGCTGTGCGATGGTAGAAAGTTGA 5159 Query 12095 TTATCTCTCCTGACATCATCGCTGACTTTCGCCAGCTCCCTTTTGCTGATGAGTCGTTTC 12154 ||||| ||||||||||||||||| || ||| | || || || | || | | |||| Sbjct 5158 TTATCAGCCCTGACATCATCGCTGATTTCCGCAACCTGCCATTCCCCGACAAC-CATTTC 5100 Query 12155 CTG-TTGTCGTATTCGACCCTCCACATCTTGAAAGAGCAGGGCCAGAGGGCTGGATGCGC 12213 | | ||||||| ||||| || ||||||||||| ||| || | | | ||||||||| Sbjct 5099 CCGATTGTCGTTTTCGATCCGCCACATCTTGAGAGAATCGGTGAAAACGCATGGATGCGC 5040 Query 12214 AAAAAATACGGCGTGTTGAATCCAAAGACATGGCGAGATGATTTGCGTGCTGGATTTGTC 12273 || |||||||||| |||||| |||||||||| ||||| | || || || || || Sbjct 5039 AAGAAATACGGCGCACTGAATCGTGAGACATGGCGTGATGACATCCGCGCCGGTTTCGTT 4980 Query 12274 GAAGCGTTCCGCGTGCTGCGACCTGATG-GCGTGTTGATTTTCAAATGGAACGAAACACA 12332 || |||||||| || ||||| || | || | ||| |||||||||||||||||||||| || Sbjct 4979 GAGGCGTTCCGTGTACTGCGCCC-GCTGAGTGTGCTGATTTTCAAATGGAACGAAACTCA 4921 Query 12333 GATTCCTGTCAGCCAGGTTTTATCACTGACAAGTGAGCGCCCGATTATCACGCAGCGAAC 12392 ||| || || ||||| ||| || |||| | | || || || ||||| || Sbjct 4920 GATCCCAGTAAGCCAAGTTACGGCATTGACCGACGCGAAACCTATGATTGGCCAGCGCAC 4861 Query 12393 AGGGAAGGGTGACAAAACCCATTGGATTAT 12422 ||||||| ||| || || || ||||| || Sbjct 4860 AGGGAAGTCTGATAAGACTCACTGGATCAT 4831 >seq2617 Length=13952 Score = 136 bits (150), Expect = 1e-27 Identities = 126/160 (79%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 20305 GAAAAAGAGGGCGTGCGGCTGGTGGCTTACCCAGACGGCGGCGGAATCTGGACTATTTGC 20364 |||||||||||| | | | || |||||||| || || || | ||||| |||||| Sbjct 3357 GAAAAAGAGGGCAACCATTTAATTGCATACCCAGATGGTGGTGGTGTATGGACGATTTGC 3298 Query 20365 GGCGGTGTAACTCGCGTTGACGGTAAGCCGGTAGTAAAAGGTATGAAGTTGACCGCCGAG 20424 || |||||||| || || || || ||||||||||| || || |||||| ||||||| ||| Sbjct 3297 GGTGGTGTAACGCGGGTAGATGGAAAGCCGGTAGTGAAGGGCATGAAGCTGACCGCTGAG 3238 Query 20425 CAGTGCGCGAAGATTGATGCTCTGGAGCAGAAAAAGGCGC 20464 |||||||| || ||||||| | |||||||||||||||| Sbjct 3237 CAGTGCGCAAAAGTTGATGCCATAGAGCAGAAAAAGGCGC 3198 >seq2 Length=8990745 Score = 98.7 bits (108), Expect = 3e-16 Identities = 101/125 (81%), Gaps = 9/125 (7%) Strand=Plus/Minus Query 334 AATTACAGTATTAACTTATTGTTTTAAAACATAA--AAGCACGGAATTTAAAATCCCTCG 391 ||||||| ||| | ||| |||||| | |||| | ||||| ||||||||||||||| Sbjct 6246147 AATTACATTATCTA--TAT-GTTTTATATGATAATCACGCACG--ATTTAAAATCCCTCG 6246093 Query 392 GCGTTCGCGCTGTGCGGGTTCAAGTCCCGCCCCGGGCACCATTGATTTAAAAAGAATTAA 451 |||| ||||||||||||||||||| ||| |||||||||||| | |||| || ||| || Sbjct 6246092 GCGTACGCGCTGTGCGGGTTCAAGCCCCACCCCGGGCACCA-TCATTT-AAGTTAATAAA 6246035 Query 452 AACAA 456 ||||| Sbjct 6246034 AACAA 6246030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154900775095104