Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq3504 129 2e-25 >seq3504 Length=7869 Score = 129 bits (142), Expect = 2e-25 Identities = 206/296 (70%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 45437 ATGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGAT 45496 |||||||| ||||| || ||| |||| | | | || | || | ||| | ||| Sbjct 7446 ATGAAACAGTATCTGGAATTGATGCAGAAAGTGCTTGATGAGGGAACGCCGAAGGGAGAC 7505 Query 45497 CGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGAC 45556 | || || || || || || ||| | ||||||| ||| |||| || || |||| ||| Sbjct 7506 AGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAAGAC 7565 Query 45557 GGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTC 45616 || || ||||| ||||| || || | ||| | ||||| |||||| | || ||| | Sbjct 7566 GGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTGTTG 7625 Query 45617 TGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGG 45676 ||||| | || || || || || ||| ||||| |||| || ||| || | |||||| Sbjct 7626 TGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATTTGG 7685 Query 45677 GACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCG 45732 || || ||||||||||| || |||||||| || || | ||||| ||| ||||| Sbjct 7686 GATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGGCG 7741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157719421469418