Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019545.1 Length=47355 Score E Sequences producing significant alignments: (Bits) Value seq3409 98.7 3e-16 >seq3409 Length=8325 Score = 98.7 bits (108), Expect = 3e-16 Identities = 275/416 (66%), Gaps = 12/416 (3%) Strand=Plus/Plus Query 44884 GATGGCTCCGGCATATGGACCATCTGTCGCGGTGCCACAAAGGTGGACGGTAAACCCGTT 44943 || ||| |||||| ||||| || || | || | ||| ||| || || || || || Sbjct 3041 GACGGCGGCGGCATCTGGACGATTTGCGGTGGCGTGACACGGGTAGATGGCAAGCCGGTA 3100 Query 44944 GTTCGGGGCATGACGCTGTCAAAGGCGAAATGCGACCAGGTTAACGCTATTGAACGTGAC 45003 || |||||||| |||| | | | | || | || || | || |||| | Sbjct 3101 GTGAAGGGCATGAAGCTGACCGCCGGGCAGTGTGCAAAGATTGATGCCGCAGAACAGCAA 3160 Query 45004 AGGGCGCTGGCGTGGGTGGAGCGCAATATTAAAGTGCCGCTGACGGAACCACAGAAAGCA 45063 | |||||| | |||||||| ||||| ||||||||||||| || || | ||||||| Sbjct 3161 AAGGCGCTCGATTGGGTGGATCGCAACGTTAAAGTGCCGCTCACTGAGACTCAGAAAGTC 3220 Query 45064 GGTATTGCTTCTTTCTGCCCTTACAACATCGGCCCAGGAAAATGTTTCCCGTCTACGTTC 45123 || ||||| || || || || | || ||||| || || || || ||| | || |||||| Sbjct 3221 GGCATTGCCTCATTTTGTCCGTGGAATATCGGTCCCGGTAACTGCTTCACCTCAACGTTC 3280 Query 45124 TATAAGCGAATT-AATGCTGGCGACCGTAAAGGAGCCTGTGAAGCTATTCGCTGGTGGAT 45182 || || |||| ||||| ||||| | | || ||||| ||| ||| | ||||| Sbjct 3281 TA-CCGCAAATTGAATGCCGGCGATCTCATTGGTGCCTGCAAAGAGATTAAGCGCTGGAT 3339 Query 45183 TAAAGACGGTGGCCGCGATTGTCGTCTGACCAAAGGCCAGAAAAATGGGTGCTATGGTCA 45242 | ||||| ||| ||||| ||| | || ||| ||| || || || || Sbjct 3340 TTGGGACGGAGGCAAAGATTGCCGTAT--CC--GCGCC-----AATAACTGTTACGGGCA 3390 Query 45243 GGTAGAGCGACGAGACCAGGAAAGCGCGTTGGCGTGCTGGGGGATTGAC-CATGAG 45297 | ||| ||| || |||||||| | || ||||||||||| | | | |||||| Sbjct 3391 GATAGCGCGGCGTGACCAGGAGGCGGAATTATCGTGCTGGGGGCTGGGCGCATGAG 3446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151384665713298