Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_019545.1
Length=47355
Score E
Sequences producing significant alignments: (Bits) Value
seq3409 98.7 3e-16
>seq3409
Length=8325
Score = 98.7 bits (108), Expect = 3e-16
Identities = 275/416 (66%), Gaps = 12/416 (3%)
Strand=Plus/Plus
Query 44884 GATGGCTCCGGCATATGGACCATCTGTCGCGGTGCCACAAAGGTGGACGGTAAACCCGTT 44943
|| ||| |||||| ||||| || || | || | ||| ||| || || || || ||
Sbjct 3041 GACGGCGGCGGCATCTGGACGATTTGCGGTGGCGTGACACGGGTAGATGGCAAGCCGGTA 3100
Query 44944 GTTCGGGGCATGACGCTGTCAAAGGCGAAATGCGACCAGGTTAACGCTATTGAACGTGAC 45003
|| |||||||| |||| | | | | || | || || | || |||| |
Sbjct 3101 GTGAAGGGCATGAAGCTGACCGCCGGGCAGTGTGCAAAGATTGATGCCGCAGAACAGCAA 3160
Query 45004 AGGGCGCTGGCGTGGGTGGAGCGCAATATTAAAGTGCCGCTGACGGAACCACAGAAAGCA 45063
| |||||| | |||||||| ||||| ||||||||||||| || || | |||||||
Sbjct 3161 AAGGCGCTCGATTGGGTGGATCGCAACGTTAAAGTGCCGCTCACTGAGACTCAGAAAGTC 3220
Query 45064 GGTATTGCTTCTTTCTGCCCTTACAACATCGGCCCAGGAAAATGTTTCCCGTCTACGTTC 45123
|| ||||| || || || || | || ||||| || || || || ||| | || ||||||
Sbjct 3221 GGCATTGCCTCATTTTGTCCGTGGAATATCGGTCCCGGTAACTGCTTCACCTCAACGTTC 3280
Query 45124 TATAAGCGAATT-AATGCTGGCGACCGTAAAGGAGCCTGTGAAGCTATTCGCTGGTGGAT 45182
|| || |||| ||||| ||||| | | || ||||| ||| ||| | |||||
Sbjct 3281 TA-CCGCAAATTGAATGCCGGCGATCTCATTGGTGCCTGCAAAGAGATTAAGCGCTGGAT 3339
Query 45183 TAAAGACGGTGGCCGCGATTGTCGTCTGACCAAAGGCCAGAAAAATGGGTGCTATGGTCA 45242
| ||||| ||| ||||| ||| | || ||| ||| || || || ||
Sbjct 3340 TTGGGACGGAGGCAAAGATTGCCGTAT--CC--GCGCC-----AATAACTGTTACGGGCA 3390
Query 45243 GGTAGAGCGACGAGACCAGGAAAGCGCGTTGGCGTGCTGGGGGATTGAC-CATGAG 45297
| ||| ||| || |||||||| | || ||||||||||| | | | ||||||
Sbjct 3391 GATAGCGCGGCGTGACCAGGAGGCGGAATTATCGTGCTGGGGGCTGGGCGCATGAG 3446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151384665713298
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |