Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_019704.1
Length=44375
Score E
Sequences producing significant alignments: (Bits) Value
seq3409 185 2e-42
seq6037 138 3e-28
seq2617 123 7e-24
>seq3409
Length=8325
Score = 185 bits (204), Expect = 2e-42
Identities = 510/769 (66%), Gaps = 37/769 (5%)
Strand=Plus/Plus
Query 41467 CCCTTTTCATACACACACAGCGCCATCC--GAAGAATCGGAGGTGAGGCTATGACCAGAA 41524
|||||| ||| |||||||||||||||| | | |||||||||| |||||| |||
Sbjct 2619 CCCTTTCAATA-ACACACAGCGCCATCCCTGCCG----GGAGGTGAGGGTATGACACGAA 2673
Query 41525 TGAGCACCATTTACAGCAGACTTTCATATGGAACAGGCACCACGCTGACCGGCTGCGGTG 41584
||||||| | |||||||| |||||||| |||| || || | | ||| || |
Sbjct 2674 TGAGCACTCTCTACAGCAGGCTTTCATACGGAAGCGGGACGGGCTTAATGGGCCTTGGCG 2733
Query 41585 TATCAGCGAAGGCATATGCCGAAACAGCAAAAACAGCAAAAGAGGTGTCCTGGATGTTGG 41644
|| || | || || |||| || ||| |||| |||| || ||| || | |
Sbjct 2734 CGTCTGCCAGAGCCTACGCCG---CATCAACTACAG----AGAGC-GTA-TGGTTGCTTG 2784
Query 41645 CCGACAGAATTGCAGGGTTAAGCCTGAGCGACTGGGCAATTATTGTCGGTATCGCATGCA 41704
| |||| ||| || ||||||| || | |||||||| |||||||||||||| | ||||
Sbjct 2785 CAGACAAAATGGCCGGGTTAACGCTCGGTGACTGGGCTATTATTGTCGGTATGGTCTGCA 2844
Query 41705 CGGTAATCACCTGTGCAGTGAACTGGTATTTCCGCTGGAAAGAA---CGG--GAGG---A 41756
| | ||| | ||| | |||||||| | |||| |||| || | | |||| |
Sbjct 2845 CAATCGGCACTTTTGCTATCAACTGGTACTACCGCAGGAAGGAGTATCAGCTGAGGGAAA 2904
Query 41757 TCGGCGCAATGGCTATGTCTCTAAAGCTGAAGAATAAATTGAGCGCAGCGGTCGTTGGTT 41816
|||| ||| | || ||||| ||| | || | || || || | | |
Sbjct 2905 AAGGCGG---GGCGTAATGTCAAAAGC--AAGCA--AACTCAGTGCGGCAATGCTGGCGC 2957
Query 41817 TGATTCTTGCCGGGGCTTCCGCACCCGTGATTCTCGATCAGTTTCTGGATGAGAAAGAGG 41876
| || ||| || | | || |||||||| | | || || | | ||| |||||||
Sbjct 2958 TCATCGCTGCTGGCGTGACTGCTCCCGTGATGATGGCGCAATTCCAGACTGAAAAAGAGG 3017
Query 41877 GTAACAGCTTGACAGCATATCGCGACGGCGGCGGACTCTGGACCATTTGCCGTGGTGCAA 41936
| | | | | || |||| ||||||||||| ||||||| |||||| |||| | |
Sbjct 3018 GGATGCGTATAAACGCTTATCCTGACGGCGGCGGCATCTGGACGATTTGCGGTGGCGTGA 3077
Query 41937 CAATGGTTGATGGCAAGCCAGTAGTACAGGGCATGAAGCTGTCAGCTGAGAAATGCGCCC 41996
|| ||| ||||||||||| ||||| |||||||||||||| | || | | | || ||
Sbjct 3078 CACGGGTAGATGGCAAGCCGGTAGTGAAGGGCATGAAGCTGACCGCCGGGCAGTGTGCAA 3137
Query 41997 AGGTAAACGCCATTGAACGCGACAAGGCGCTGGCGTGGGTTGACCGAAATATCAAAGTAC 42056
|| | | ||| |||| | |||||||| | ||||| || || || | ||||| |
Sbjct 3138 AGATTGATGCCGCAGAACAGCAAAAGGCGCTCGATTGGGTGGATCGCAACGTTAAAGTGC 3197
Query 42057 CACTGACCGAACCACAGAAAGCGGGTATCGCTTCTTTCTGCCCATATAACATCGGCCCCG 42116
| || || || | ||||||| || || || || || || || | || ||||| ||||
Sbjct 3198 CGCTCACTGAGACTCAGAAAGTCGGCATTGCCTCATTTTGTCCGTGGAATATCGGTCCCG 3257
Query 42117 GAAAATGCTTCCCATCGACCTTCTATAAGCGCA---TCAACGCAGGTGACCGCATCGGTG 42173
| || |||||| | || || |||| | |||| | || || || || | ||| ||||
Sbjct 3258 GTAACTGCTTCACCTCAACGTTCT---ACCGCAAATTGAATGCCGGCGATCTCATTGGTG 3314
Query 42174 CATGCGAGGCAATCCGCTGGTGGATTAAAGACGGTGGCCGCGATTGCCG 42222
| ||| | | || | |||||| ||||| ||| ||||||||
Sbjct 3315 CCTGCAAAGAGATTAAGCGCTGGATTTGGGACGGAGGCAAAGATTGCCG 3363
>seq6037
Length=3259
Score = 138 bits (152), Expect = 3e-28
Identities = 323/484 (67%), Gaps = 5/484 (1%)
Strand=Plus/Minus
Query 37856 GGAATTCTGATCCCCGCTACGCCGGAGACCAGCGATATTCTGCAATCAAAAATCAAACTT 37915
||||| ||||| ||||| || ||||| | | ||| || | || | || ||| |
Sbjct 1733 GGAATACTGATACCCGCCACACCGGATTCAAAAGATTTTATTCAG---AGGATAAAAGTC 1677
Query 37916 GGTGCCGTATTGGTAGCCGAATTTCGTCAGGTGAGGAATCCAGCATTCCATCGCCGTTTC 37975
|| ||||| | ||||| | | ||||| || || || || || || ||| ||
Sbjct 1676 GGGGCCGTTGTCTCTGCCGATATCAGGCAGGTCAGAAACCCGGCTTTTCACCGCAAGTTT 1617
Query 37976 TTTGCGCTCCTGAATCTCGGGTTTGAATACTGGGAACCCACCGGTGGGGCGATTTCTTCC 38035
||| | || || || ||||| || ||||||||| |||| || || ||||| || || |
Sbjct 1616 TTTTCACTGCTTAACCTCGGTTTCGAATACTGGCAACCGACAGGCGGGGCCATATCCCCG 1557
Query 38036 AATGAACGTAAATTGGTGACCGGGTACGCTAAATTCCTCGCGGCATTTGGTGGAAACGAA 38095
| ||| ||| || | ||| |||| | || ||||| |||| |||| ||||
Sbjct 1556 ACAGAAAAAAAACTGATACGCGGCTACGTTCGTTTTCTCGCTCACTTTGCAGGAAGCGAA 1497
Query 38096 GGCGCACTGCTGGATGCTGCCGAGCAGTATCTGGACCGTATCGCCGATAAGCGCGCCGGT 38155
| |||| | | || ||||| || | || ||| | | | ||| | || ||||| |
Sbjct 1496 GACGCATTACAGGCCGCTGCTGATGAATACCTGAATGGCGTAGCCAAAAAACGCGCTGCA 1437
Query 38156 AGTATCAGCATCTGCAAATCCTATGACGCATATCGTGCATGGGTGATCATCGAGTCTGGC 38215
| |||||||| ||||| | || |||| || ||||||| |||||||| |||
Sbjct 1436 AATATCAGCACGGTAAAATCATTCGAAGCATTCCGCCGCTGGGTGACTATCGAGTCCGGC 1377
Query 38216 CACTACGACGCCATAC-AGCTTCCCGACGGCACCCTTCGCAAACACCCCCGCAGCATTGC 38274
|| ||||| | |||| |||| || ||||| | ||| | |||| | || || || |
Sbjct 1376 CATTACGAAGT-ATACGAGCTGCCAGACGGTAGCCTGCACAAAGAGCCGCGATCGATATC 1318
Query 38275 CTTTGCCAACATGGACGAAACCGAGTTCCAGCAGCTGTACAAAGCCGCGCTCGATGTTCT 38334
|| || || ||||| |||| ||| || || |||||||||||| | || ||||||||
Sbjct 1317 GTTCGCAAAAATGGAAGAAATCGAATTTCACGCCCTGTACAAAGCCACACTGGATGTTCT 1258
Query 38335 GTGG 38338
|||
Sbjct 1257 CTGG 1254
>seq2617
Length=13952
Score = 123 bits (136), Expect = 7e-24
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 41819 ATTCTTGCCGGGGCTTCCGCACCCGTGATTCTCGATCAGTTTCTGGATGAGAAAGAGGGT 41878
|| || ||||| ||| ||||| | || ||||| || | ||||| ||||| ||||||||
Sbjct 3405 ATACTGGCCGGCGCTCCCGCATCGGTTATTCTTGACCGATTTCTTGATGAAAAAGAGGGC 3346
Query 41879 AACAGCTTGACAGCATATCGCGACGGCGGCGGACTCTGGACCATTTGCCGTGGTGCAACA 41938
||| || | ||||| | || || || || | ||||| |||||| |||||| |||
Sbjct 3345 AACCATTTAATTGCATACCCAGATGGTGGTGGTGTATGGACGATTTGCGGTGGTGTAACG 3286
Query 41939 ATGGTTGATGGCAAGCCAGTAGTACAGGGCATGAAGCTGTCAGCTGAGAAATGCGCCCAG 41998
||| ||||| ||||| ||||| |||||||||||||| | |||||| | ||||| |
Sbjct 3285 CGGGTAGATGGAAAGCCGGTAGTGAAGGGCATGAAGCTGACCGCTGAGCAGTGCGCAAAA 3226
Query 41999 GTAAACGCCATTGAACGCGACAAGGCGC 42026
|| | ||||| || | | |||||||
Sbjct 3225 GTTGATGCCATAGAGCAGAAAAAGGCGC 3198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141850538363178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |