Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_019706.1
Length=42780
Score E
Sequences producing significant alignments: (Bits) Value
seq2784 100 8e-17
seq4809 96.9 9e-16
seq1206 95.1 3e-15
seq5862 89.7 1e-13
>seq2784
Length=12453
Score = 100 bits (110), Expect = 8e-17
Identities = 172/247 (70%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 33740 CTGTATGAAGAGCTTATCGGCGCAGATTTAACGAAAAATCAGAGCAAGGTTGCCCACGCC 33799
|| || ||||| || |||||||| || | || ||||| |||||| || |||||
Sbjct 4707 CTTTACGAAGAACTGATCGGCGCTAATCTGACACGCAATCAAGCCAAGGTGGCACACGCT 4648
Query 33800 ATATGCCGTAAAACATACGGATACGGTAAAAAGATGGATCGCATCTCTGATAGTCAGTTA 33859
||||||| || |||||||| | | || || ||||||||||| |||| ||||| |||
Sbjct 4647 GTATGCCGAAAGACATACGGCTTCAAGAAGAAAATGGATCGCATTGCTGACAGTCAATTA 4588
Query 33860 GCTCAAATTACCAGGCTGCCAAGACAGAAGGTAAACAAGGCCAAGAATGAGCTTATCGCG 33919
|| | || ||| | || | |||| |||| ||||| ||||||||||||||
Sbjct 4587 GCCGAGCTTTGCAGAATCAGCAGGCCAAAGGCCAACATTGCCAAAAATGAGCTTATCGCC 4528
Query 33920 ATGAAGGTTATCCTTCGCGAAGGCCAGC-AAATCGGGCCTAACAAGAACATCGAGGAATG 33978
||||| ||| | | || || ||| |||| || || ||||| ||||| |||||
Sbjct 4527 ATGAAAGTTCTGGTGAAAGACGG-AAGCAAAATTGGCCCAAACAAAAACATATCAGAATG 4469
Query 33979 GCAAATC 33985
| | |||
Sbjct 4468 GGAGATC 4462
>seq4809
Length=3389
Score = 96.9 bits (106), Expect = 9e-16
Identities = 242/363 (67%), Gaps = 10/363 (3%)
Strand=Plus/Plus
Query 37008 TCAAATCAAATACGCCAGCACACGACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTG 37067
|||||||| | || | || | |||||||| |||| ||| |||| | | |||
Sbjct 71 TCAAATCACACACCAGACCAGAGCACAAGGACACATGGCGAACCCCGCCCGAGGTCTTTC 130
Query 37068 ATGCACTGGATATTGAGTTTGGATTCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTC 37127
| || |||||| |||||||| |||| || ||| | || ||| | || | ||| | |
Sbjct 131 AGGCGCTGGATGCGGAGTTTGGCTTCTACCTCGATGCCGCCGCGGACCACGACAATACCC 190
Query 37128 TGTGCGCTCACTGGCTAACTGAGGCT----GACGACGCGCTAAATTCTGAGTGGATAAGC 37183
|||| || || || |||| || || || || || | ||| |||| |||
Sbjct 191 TGTGTCGTC--TG--TATCTGACGCCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGC 246
Query 37184 CACGGTGCAATCTGGAATAACCCACCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCC 37243
||| || |||| || || ||||||||||||||| | || ||||| || |||||
Sbjct 247 ACCGGCGCCATCTTCTGCAATCCCCCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCT 306
Query 37244 GCTGAGCAGTGCATACAACAGCGACAGACGGTAGTGATGCTTGTGCCAGAGGATATGTCT 37303
||||||||| || | ||| | ||||| || ||||| |||| | ||||| ||
Sbjct 307 GCTGAGCAGAGCCGCAAGCAGAATAAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCG 366
Query 37304 GTCGGATGGTTCAGCA-AGGCTCTGGAGAGTATTGACGAAGTTCGCATCATCACTGATGG 37362
||||||||| ||| ||||| | | | |||| || || ||| ||||||| || ||
Sbjct 367 ACGGGATGGTTC-GCACTGGCTCAGAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGG 425
Query 37363 ACG 37365
||
Sbjct 426 GCG 428
Score = 84.2 bits (92), Expect = 6e-12
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 38072 ATGGCTAATCTACGCAAAGAAGCGCGCGGCAGAGAATGCCAGGTACGTATTTACGGCGTA 38131
||||| ||||| ||||| || | ||| |||| || ||||| | | | || |
Sbjct 582 ATGGCGAATCTTAAAAAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGGCTCTCGGGTATC 641
Query 38132 TGCAATGGCAATCCTGAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGGA 38191
|| || || || ||||||| ||| ||||| ||||||| ||| | || ||||||||
Sbjct 642 TGTAACGGTAACACTGAAACCGTAGTGCTGGCCTATTACCGAATGTCCGGCATTTGCGGC 701
Query 38192 ACGGGAATGAAGCCTGACGACCTGATCGGTGCATGG 38227
|| || ||||||||||||||||| | || ||||||
Sbjct 702 ACAGGCATGAAGCCTGACGACCTTTTTGGCGCATGG 737
>seq1206
Length=31275
Score = 95.1 bits (104), Expect = 3e-15
Identities = 193/283 (68%), Gaps = 3/283 (1%)
Strand=Plus/Plus
Query 33688 GGAGCGTCGTGTGGCAGAAGTTGAAGATGGTTATACCCGTCTTGCAAATGCCCTGTATGA 33747
||||| ||| ||||| || ||| ||||| | | | || || | | || || ||
Sbjct 13254 GGAGCCTCGCGTGGCTGACACTGATGATGGCTTCATCATGCTGGCGATGGAGCTTTACGA 13313
Query 33748 AGAGCTTATCGGCGCAGATTTAACGAAAAATCAGAGCAAGGTTGCCCACGCCATATGCCG 33807
||| || |||||||| || | || ||||| |||| | || ||||| |||||||
Sbjct 13314 AGAACTGATCGGCGCTAATCTGACTCGCAATCAAGCCAAGATGGCACACGCTGTATGCCG 13373
Query 33808 TAAAACATACGGATACGGTAAAAAGATGGATCGCATCTCTGATAGTCAGTTAGCTCAAAT 33867
|| |||||||| | | || || ||||||||||| |||| ||||| ||||| | |
Sbjct 13374 AAAGACATACGGCTTCAAGAAGAAAATGGATCGCATTGCTGACAGTCAATTAGCCGAGCT 13433
Query 33868 TACCAGGCTGCCAAGACAGAAGGTAAACAAGGCCAAGAATGAGCTTATCGCGATGAAGGT 33927
| ||| | || | |||| |||| ||||| |||||||||||||| ||||| ||
Sbjct 13434 TTGCAGAATCAGCAGGCCAAAGGCCAACATTGCCAA-AATGAGCTTATCGCCATGAAAGT 13492
Query 33928 TATCCTTCGCGAAGGCCAGC-AAATCGGGCCTAACAAGAACAT 33969
| | | || || ||| |||| || || ||||| |||||
Sbjct 13493 TCTGGTGAAAGACGG-AAGCAAAATTGGCCCAAACAAAAACAT 13534
>seq5862
Length=3465
Score = 89.7 bits (98), Expect = 1e-13
Identities = 226/339 (67%), Gaps = 10/339 (3%)
Strand=Plus/Plus
Query 37032 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 37091
|||||||| |||| ||| |||| | | || | || |||||| |||||||| |
Sbjct 23 ACAAGGACACATGGCGAACCCCGCACGAGGTCTTCCAGGCGCTGGATGCGGAGTTTGGCT 82
Query 37092 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGCGCTCACTGGCTAACTGAGG 37151
||| || ||| | || ||| | || | ||| | ||||| || || || |||| |
Sbjct 83 TCTACCTCGATGCCGCCGCGGACCACGACAATACCCTGTGTCGTC--TG--TATCTGACG 138
Query 37152 CT----GACGACGCGCTAAATTCTGAGTGGATAAGCCACGGTGCAATCTGGAATAACCCA 37207
| || || || || | ||| |||| ||| ||| || |||| || ||
Sbjct 139 CCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGCACCGGCGCCATCTTCTGCAATCCC 198
Query 37208 CCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGA 37267
||||||||||||||| | || ||||| || ||||| ||||||||| || | |||
Sbjct 199 CCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCTGCTGAGCAGAGCCGCAAGCAGAAT 258
Query 37268 CAGACGGTAGTGATGCTTGTGCCAGAGGATATGTCTGTCGGATGGTTCAGCA-AGGCTCT 37326
| ||||| || ||||| |||| | ||||| || ||||||||| ||| |||| |
Sbjct 259 AAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCGACGGGATGGTTC-GCACAGGCACA 317
Query 37327 GGAGAGTATTGACGAAGTTCGCATCATCACTGATGGACG 37365
| | | |||| || || ||| ||||||| || || ||
Sbjct 318 GAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGGGCG 356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136747540670748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |