Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019706.1 Length=42780 Score E Sequences producing significant alignments: (Bits) Value seq2784 100 8e-17 seq4809 96.9 9e-16 seq1206 95.1 3e-15 seq5862 89.7 1e-13 >seq2784 Length=12453 Score = 100 bits (110), Expect = 8e-17 Identities = 172/247 (70%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 33740 CTGTATGAAGAGCTTATCGGCGCAGATTTAACGAAAAATCAGAGCAAGGTTGCCCACGCC 33799 || || ||||| || |||||||| || | || ||||| |||||| || ||||| Sbjct 4707 CTTTACGAAGAACTGATCGGCGCTAATCTGACACGCAATCAAGCCAAGGTGGCACACGCT 4648 Query 33800 ATATGCCGTAAAACATACGGATACGGTAAAAAGATGGATCGCATCTCTGATAGTCAGTTA 33859 ||||||| || |||||||| | | || || ||||||||||| |||| ||||| ||| Sbjct 4647 GTATGCCGAAAGACATACGGCTTCAAGAAGAAAATGGATCGCATTGCTGACAGTCAATTA 4588 Query 33860 GCTCAAATTACCAGGCTGCCAAGACAGAAGGTAAACAAGGCCAAGAATGAGCTTATCGCG 33919 || | || ||| | || | |||| |||| ||||| |||||||||||||| Sbjct 4587 GCCGAGCTTTGCAGAATCAGCAGGCCAAAGGCCAACATTGCCAAAAATGAGCTTATCGCC 4528 Query 33920 ATGAAGGTTATCCTTCGCGAAGGCCAGC-AAATCGGGCCTAACAAGAACATCGAGGAATG 33978 ||||| ||| | | || || ||| |||| || || ||||| ||||| ||||| Sbjct 4527 ATGAAAGTTCTGGTGAAAGACGG-AAGCAAAATTGGCCCAAACAAAAACATATCAGAATG 4469 Query 33979 GCAAATC 33985 | | ||| Sbjct 4468 GGAGATC 4462 >seq4809 Length=3389 Score = 96.9 bits (106), Expect = 9e-16 Identities = 242/363 (67%), Gaps = 10/363 (3%) Strand=Plus/Plus Query 37008 TCAAATCAAATACGCCAGCACACGACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTG 37067 |||||||| | || | || | |||||||| |||| ||| |||| | | ||| Sbjct 71 TCAAATCACACACCAGACCAGAGCACAAGGACACATGGCGAACCCCGCCCGAGGTCTTTC 130 Query 37068 ATGCACTGGATATTGAGTTTGGATTCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTC 37127 | || |||||| |||||||| |||| || ||| | || ||| | || | ||| | | Sbjct 131 AGGCGCTGGATGCGGAGTTTGGCTTCTACCTCGATGCCGCCGCGGACCACGACAATACCC 190 Query 37128 TGTGCGCTCACTGGCTAACTGAGGCT----GACGACGCGCTAAATTCTGAGTGGATAAGC 37183 |||| || || || |||| || || || || || | ||| |||| ||| Sbjct 191 TGTGTCGTC--TG--TATCTGACGCCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGC 246 Query 37184 CACGGTGCAATCTGGAATAACCCACCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCC 37243 ||| || |||| || || ||||||||||||||| | || ||||| || ||||| Sbjct 247 ACCGGCGCCATCTTCTGCAATCCCCCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCT 306 Query 37244 GCTGAGCAGTGCATACAACAGCGACAGACGGTAGTGATGCTTGTGCCAGAGGATATGTCT 37303 ||||||||| || | ||| | ||||| || ||||| |||| | ||||| || Sbjct 307 GCTGAGCAGAGCCGCAAGCAGAATAAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCG 366 Query 37304 GTCGGATGGTTCAGCA-AGGCTCTGGAGAGTATTGACGAAGTTCGCATCATCACTGATGG 37362 ||||||||| ||| ||||| | | | |||| || || ||| ||||||| || || Sbjct 367 ACGGGATGGTTC-GCACTGGCTCAGAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGG 425 Query 37363 ACG 37365 || Sbjct 426 GCG 428 Score = 84.2 bits (92), Expect = 6e-12 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 38072 ATGGCTAATCTACGCAAAGAAGCGCGCGGCAGAGAATGCCAGGTACGTATTTACGGCGTA 38131 ||||| ||||| ||||| || | ||| |||| || ||||| | | | || | Sbjct 582 ATGGCGAATCTTAAAAAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGGCTCTCGGGTATC 641 Query 38132 TGCAATGGCAATCCTGAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGGA 38191 || || || || ||||||| ||| ||||| ||||||| ||| | || |||||||| Sbjct 642 TGTAACGGTAACACTGAAACCGTAGTGCTGGCCTATTACCGAATGTCCGGCATTTGCGGC 701 Query 38192 ACGGGAATGAAGCCTGACGACCTGATCGGTGCATGG 38227 || || ||||||||||||||||| | || |||||| Sbjct 702 ACAGGCATGAAGCCTGACGACCTTTTTGGCGCATGG 737 >seq1206 Length=31275 Score = 95.1 bits (104), Expect = 3e-15 Identities = 193/283 (68%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 33688 GGAGCGTCGTGTGGCAGAAGTTGAAGATGGTTATACCCGTCTTGCAAATGCCCTGTATGA 33747 ||||| ||| ||||| || ||| ||||| | | | || || | | || || || Sbjct 13254 GGAGCCTCGCGTGGCTGACACTGATGATGGCTTCATCATGCTGGCGATGGAGCTTTACGA 13313 Query 33748 AGAGCTTATCGGCGCAGATTTAACGAAAAATCAGAGCAAGGTTGCCCACGCCATATGCCG 33807 ||| || |||||||| || | || ||||| |||| | || ||||| ||||||| Sbjct 13314 AGAACTGATCGGCGCTAATCTGACTCGCAATCAAGCCAAGATGGCACACGCTGTATGCCG 13373 Query 33808 TAAAACATACGGATACGGTAAAAAGATGGATCGCATCTCTGATAGTCAGTTAGCTCAAAT 33867 || |||||||| | | || || ||||||||||| |||| ||||| ||||| | | Sbjct 13374 AAAGACATACGGCTTCAAGAAGAAAATGGATCGCATTGCTGACAGTCAATTAGCCGAGCT 13433 Query 33868 TACCAGGCTGCCAAGACAGAAGGTAAACAAGGCCAAGAATGAGCTTATCGCGATGAAGGT 33927 | ||| | || | |||| |||| ||||| |||||||||||||| ||||| || Sbjct 13434 TTGCAGAATCAGCAGGCCAAAGGCCAACATTGCCAA-AATGAGCTTATCGCCATGAAAGT 13492 Query 33928 TATCCTTCGCGAAGGCCAGC-AAATCGGGCCTAACAAGAACAT 33969 | | | || || ||| |||| || || ||||| ||||| Sbjct 13493 TCTGGTGAAAGACGG-AAGCAAAATTGGCCCAAACAAAAACAT 13534 >seq5862 Length=3465 Score = 89.7 bits (98), Expect = 1e-13 Identities = 226/339 (67%), Gaps = 10/339 (3%) Strand=Plus/Plus Query 37032 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 37091 |||||||| |||| ||| |||| | | || | || |||||| |||||||| | Sbjct 23 ACAAGGACACATGGCGAACCCCGCACGAGGTCTTCCAGGCGCTGGATGCGGAGTTTGGCT 82 Query 37092 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGCGCTCACTGGCTAACTGAGG 37151 ||| || ||| | || ||| | || | ||| | ||||| || || || |||| | Sbjct 83 TCTACCTCGATGCCGCCGCGGACCACGACAATACCCTGTGTCGTC--TG--TATCTGACG 138 Query 37152 CT----GACGACGCGCTAAATTCTGAGTGGATAAGCCACGGTGCAATCTGGAATAACCCA 37207 | || || || || | ||| |||| ||| ||| || |||| || || Sbjct 139 CCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGCACCGGCGCCATCTTCTGCAATCCC 198 Query 37208 CCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGA 37267 ||||||||||||||| | || ||||| || ||||| ||||||||| || | ||| Sbjct 199 CCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCTGCTGAGCAGAGCCGCAAGCAGAAT 258 Query 37268 CAGACGGTAGTGATGCTTGTGCCAGAGGATATGTCTGTCGGATGGTTCAGCA-AGGCTCT 37326 | ||||| || ||||| |||| | ||||| || ||||||||| ||| |||| | Sbjct 259 AAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCGACGGGATGGTTC-GCACAGGCACA 317 Query 37327 GGAGAGTATTGACGAAGTTCGCATCATCACTGATGGACG 37365 | | | |||| || || ||| ||||||| || || || Sbjct 318 GAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGGGCG 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136747540670748