Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq8203 111 4e-20 seq7786 89.7 1e-13 seq4809 87.8 4e-13 >seq8203 Length=1368 Score = 111 bits (122), Expect = 4e-20 Identities = 215/312 (69%), Gaps = 19/312 (6%) Strand=Plus/Plus Query 24044 TCCTTGAGTTTTGCCCTGTGCCATCCCTGCTTTTTATC----GAG-AGATGTTTGTGCGA 24098 ||||||| | ||| ||| ||||||||| ||||| || ||| ||||| || | Sbjct 313 TCCTTGAATGACGCCTTGTTCCATCCCTGTTTTTTCTCAGTCGAGCAGATG-----GCAA 367 Query 24099 AACCTTCCTCAAGGTTATACAGATACCGACCGATTCCCCACTGAACGGCAGCGCGCTTCA 24158 || || || || || ||||| |||||||| |||||||||| || || ||||||| Sbjct 368 AATTCTCTTCCAGTGAGTAGAGATATCGACCGATCCCCCACTGAAAAGCTGCTCGCTTCA 427 Query 24159 TTGCACCGGAACGACCACCTTTGACGGCTTCTACCTGCGTGTTTTCAGCAGCATCCCATT 24218 ||| || || ||||| || || || || ||||| || || || || | ||||| | Sbjct 428 TTGAGCCAGACATGCCACCCTTAACCGCCTCCACCTGTGTTTTATCTGCGCCGTCCCACT 487 Query 24219 TGGTTACCCATTCGGAATCAATCTTTATTGATATGCCGCATTCAACGCCGCCGTT--GTT 24276 | |||||||| || | ||| || ||||||| || ||||||||| | || Sbjct 488 TCGTTACCCACTCATCACGAATACGAATGAATATGCCACACATAACGCCGCCATCAGGTC 547 Query 24277 GGGAATATCGCGGTATTCATTGCGCCA-TCCTGCTTTGCCGCAAACATCGTCCAGGCGTT 24335 || | | | ||||||| ||| | || |||| || ||||| |||||||| |||| Sbjct 548 CGGGAGA-----GAATTCATTTTTCCAATTCT-CTTTTCCACAAACGTCGTCCAGTCGTT 601 Query 24336 TCATGATTGCCC 24347 ||||||| |||| Sbjct 602 TCATGATGGCCC 613 >seq7786 Length=1398 Score = 89.7 bits (98), Expect = 1e-13 Identities = 113/151 (75%), Gaps = 7/151 (5%) Strand=Plus/Minus Query 35522 AAACGCGCATTCTCGTGCGCATATCAACCAAGAGCTTTTCGGGATATGAGACAGAGACAG 35581 || || |||||| ||||| | | | | |||||||| || | |||| | ||| ||| Sbjct 1392 AACCGTGCATTCGCGTGCACTTCACTAG--AGAGCTTTCCGTAGTGTGAGTCTGAGGCAG 1335 Query 35582 GACGGTGGCTTACATCGTGCCGCTCTTGGGCTGTCCATGTCTGCGAGAACTGGCTCATAT 35641 | |||||| | || |||| ||||||| || ||| |||||||| || |||| ||||| | Sbjct 1334 GGCGGTGGATCACCTCGTTCCGCTCTCGG-CTGCCCATGTCTACGCGAACAGGCTCGCAC 1276 Query 35642 CACCAAAAAGGTAAATACGATGTCCAATATC 35672 ||| | ||||||||||||||| ||||||| Sbjct 1275 CAC--AGAAGGTAAATACGATG--CAATATC 1249 >seq4809 Length=3389 Score = 87.8 bits (96), Expect = 4e-13 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 32415 AAAGAAGCACGCGGCAGAGAATGCCAGGTACGTATTTACGGCGTATGCAATGGCAACCCT 32474 ||||| || | ||| |||| || ||||| | | | || | || || || ||| || Sbjct 597 AAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGGCTCTCGGGTATCTGTAACGGTAACACT 656 Query 32475 GAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGGAACGGGAATGAAGCCT 32534 ||||| ||| ||||| ||||||| ||| | || |||||||| || || ||||||||| Sbjct 657 GAAACCGTAGTGCTGGCCTATTACCGAATGTCCGGCATTTGCGGCACAGGCATGAAGCCT 716 Query 32535 GACGACCTGATCGGCGCATGG 32555 |||||||| | ||||||||| Sbjct 717 GACGACCTTTTTGGCGCATGG 737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120158798955858