Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_019708.1
Length=37595
Score E
Sequences producing significant alignments: (Bits) Value
seq8203 111 4e-20
seq7786 89.7 1e-13
seq4809 87.8 4e-13
>seq8203
Length=1368
Score = 111 bits (122), Expect = 4e-20
Identities = 215/312 (69%), Gaps = 19/312 (6%)
Strand=Plus/Plus
Query 24044 TCCTTGAGTTTTGCCCTGTGCCATCCCTGCTTTTTATC----GAG-AGATGTTTGTGCGA 24098
||||||| | ||| ||| ||||||||| ||||| || ||| ||||| || |
Sbjct 313 TCCTTGAATGACGCCTTGTTCCATCCCTGTTTTTTCTCAGTCGAGCAGATG-----GCAA 367
Query 24099 AACCTTCCTCAAGGTTATACAGATACCGACCGATTCCCCACTGAACGGCAGCGCGCTTCA 24158
|| || || || || ||||| |||||||| |||||||||| || || |||||||
Sbjct 368 AATTCTCTTCCAGTGAGTAGAGATATCGACCGATCCCCCACTGAAAAGCTGCTCGCTTCA 427
Query 24159 TTGCACCGGAACGACCACCTTTGACGGCTTCTACCTGCGTGTTTTCAGCAGCATCCCATT 24218
||| || || ||||| || || || || ||||| || || || || | ||||| |
Sbjct 428 TTGAGCCAGACATGCCACCCTTAACCGCCTCCACCTGTGTTTTATCTGCGCCGTCCCACT 487
Query 24219 TGGTTACCCATTCGGAATCAATCTTTATTGATATGCCGCATTCAACGCCGCCGTT--GTT 24276
| |||||||| || | ||| || ||||||| || ||||||||| | ||
Sbjct 488 TCGTTACCCACTCATCACGAATACGAATGAATATGCCACACATAACGCCGCCATCAGGTC 547
Query 24277 GGGAATATCGCGGTATTCATTGCGCCA-TCCTGCTTTGCCGCAAACATCGTCCAGGCGTT 24335
|| | | | ||||||| ||| | || |||| || ||||| |||||||| ||||
Sbjct 548 CGGGAGA-----GAATTCATTTTTCCAATTCT-CTTTTCCACAAACGTCGTCCAGTCGTT 601
Query 24336 TCATGATTGCCC 24347
||||||| ||||
Sbjct 602 TCATGATGGCCC 613
>seq7786
Length=1398
Score = 89.7 bits (98), Expect = 1e-13
Identities = 113/151 (75%), Gaps = 7/151 (5%)
Strand=Plus/Minus
Query 35522 AAACGCGCATTCTCGTGCGCATATCAACCAAGAGCTTTTCGGGATATGAGACAGAGACAG 35581
|| || |||||| ||||| | | | | |||||||| || | |||| | ||| |||
Sbjct 1392 AACCGTGCATTCGCGTGCACTTCACTAG--AGAGCTTTCCGTAGTGTGAGTCTGAGGCAG 1335
Query 35582 GACGGTGGCTTACATCGTGCCGCTCTTGGGCTGTCCATGTCTGCGAGAACTGGCTCATAT 35641
| |||||| | || |||| ||||||| || ||| |||||||| || |||| ||||| |
Sbjct 1334 GGCGGTGGATCACCTCGTTCCGCTCTCGG-CTGCCCATGTCTACGCGAACAGGCTCGCAC 1276
Query 35642 CACCAAAAAGGTAAATACGATGTCCAATATC 35672
||| | ||||||||||||||| |||||||
Sbjct 1275 CAC--AGAAGGTAAATACGATG--CAATATC 1249
>seq4809
Length=3389
Score = 87.8 bits (96), Expect = 4e-13
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 32415 AAAGAAGCACGCGGCAGAGAATGCCAGGTACGTATTTACGGCGTATGCAATGGCAACCCT 32474
||||| || | ||| |||| || ||||| | | | || | || || || ||| ||
Sbjct 597 AAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGGCTCTCGGGTATCTGTAACGGTAACACT 656
Query 32475 GAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGGAACGGGAATGAAGCCT 32534
||||| ||| ||||| ||||||| ||| | || |||||||| || || |||||||||
Sbjct 657 GAAACCGTAGTGCTGGCCTATTACCGAATGTCCGGCATTTGCGGCACAGGCATGAAGCCT 716
Query 32535 GACGACCTGATCGGCGCATGG 32555
|||||||| | |||||||||
Sbjct 717 GACGACCTTTTTGGCGCATGG 737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120158798955858
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |