Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019710.1 Length=40710 Score E Sequences producing significant alignments: (Bits) Value seq3409 787 0.0 seq4809 93.3 1e-14 seq5862 89.7 1e-13 >seq3409 Length=8325 Score = 787 bits (872), Expect = 0.0 Identities = 1150/1607 (72%), Gaps = 34/1607 (2%) Strand=Plus/Plus Query 52 TTTAACGCTAACCCGAtttttttAGTTTT-AAGGTGTTGACATATGGCAGATAAACGAAT 110 ||||||||||||||||||||||||||||| |||||| | || |||||||| ||||||| Sbjct 6596 TTTAACGCTAACCCGATTTTTTTAGTTTTCAAGGTGCTCTCAAATGGCAGAAAAACGAAA 6655 Query 111 CCGTTCCGACAGTTCGGCGGCAGCGGTTCAGGCCATGAAAAATGCAGCTGTGGACACCAT 170 ||| || |||||| || |||| ||| | ||||||||||||||||| | | ||||||| | Sbjct 6656 CCGCTCTGACAGTGCGACGGCGGCGATCCAGGCCATGAAAAATGCGACCGGGGACACCCT 6715 Query 171 CGATCCGCCGTCCCATGCAGGTTTGGAGAAAAAAGCCGAACCATTCTGGCATGACAATAT 230 | || ||| | || || |||||||| ||||||||||| || || |||||||||||||| Sbjct 6716 TCAGCCCCCGGCGCACGCGGGTTTGGAAAAAAAAGCCGAGCCTTTTTGGCATGACAATAT 6775 Query 231 CAGATCGAAAGCTCTGGACAGCTGGACGCCTGCCGACCTTCTAGCCGCCGTAGAACTTGC 290 |||| ||||| |||| |||||||| || || ||||| ||||||| || || || || Sbjct 6776 TCGATCCAAAGCATTGGATAGCTGGACACCCGCTGACCTGTTAGCCGCTGTTGAGCTGGC 6835 Query 291 TAATAATCAGCTCTATATCACCGTTTTACGCAAGGATTTACGCAAAGAAGAGCGCATACG 350 |||||||| | |||||||| | | ||||| |||||||| || ||||||||| | || Sbjct 6836 AAATAATCAACACTATATCAACATGTTACGGCGTGATTTACGTAACGAAGAGCGCGTGCG 6895 Query 351 CGGGGAGGAGCGAGACGAAGGCCTT---ATAAAAGACCTCCGCAAGCAAATTGTTGAGCT 407 ||| |||| | || || | || || || ||||| | ||||| ||||| || || | Sbjct 6896 CGGTGAGGCGAGAAAC-ATGG--TTGAAATTAAAGAATTGCGCAAACAAATCGTAGAATT 6952 Query 408 ACAACGAACTATCCTGGCTCAGCGCCGCGACCTCCAGATCCACTCCCACGCAACCAACGG 467 ||| || | || |||| ||||| || || || || ||||| |||||||| |||||||| Sbjct 6953 ACAGCGCGCGATTTTGGCACAGCGACGAGATCTGCAAATCCATTCCCACGCTACCAACGG 7012 Query 468 CGAAAGTCGCGACCAGAAGAAACGTAATCAG-AACGATCGTGATGCACGGAATACCAAAA 526 ||||| ||||||||| | ||| || ||| || || | | || | | || | Sbjct 7013 TGAAAGCCGCGACCAGC-GTAACAAAAACAGGAATGACAGGAACGCCAGAAGCACGGTCA 7071 Query 527 ACGAGCATCAGGACCAGGACGATAACCTGATCGCCTTTCCCAAGCACGGATAAAAGACT- 585 | ||||| | | |||||||| |||||||| ||||| || || ||| | | Sbjct 7072 GTGGTCATCAACGCGAAGACGATAATCTGATCGCGTTTCCAAAACAT---TAAGGGGCAT 7128 Query 586 --ATGACGCGAGGTGAGCGTGTAATAGCGTTCATTGAGCGCTTTTGCATCGTGCCAGAAG 643 ||||||||||||||||| || ||||||||||||||||||| |||||| ||||| |||| Sbjct 7129 TCATGACGCGAGGTGAGCGCGTGATAGCGTTCATTGAGCGCTATTGCATTGTGCCGGAAG 7188 Query 644 GCAAGCTTATCGGCCAACCTATGCGGTTGGACCCCTTTCAGAAAGATTTCATCCTGGCGG 703 ||||| ||||||| || || ||| | | || ||| |||||||| || | || | | Sbjct 7189 GCAAGTTTATCGGACAGCCGATGAAGCTTGATGGCTTCCAGAAAGACTTTCTGCTTGATG 7248 Query 704 TTTACGACAATCCAGCCGGAACGGATATGGCGATCCTCTCCATCGCCCGAAAAAATGGTA 763 | || ||||| || | || || | ||| || | |||||||||||| || || | Sbjct 7249 TCTATGACAACCCGGTGGGCACCAGCAGGGCAATTTTAAGCATCGCCCGAAAGAACGGGA 7308 Query 764 AGACTGGCCTGATTGCCGGAATTCTGCTGGCTCACCTGGTGGGGCCTGAAGCGGTGCAGA 823 | || || | ||||| ||||| || || ||||||||||| || || ||||||||||| | Sbjct 7309 AAACCGGGTTAATTGCTGGAATACTTCTTGCTCACCTGGTTGGCCCAGAAGCGGTGCAAA 7368 Query 824 ACACGCAGATTGTCAGCGGTGCACTCAGCCGGGAACAGGCGGCCATCGTTTTTAACCTCG 883 || | ||||| ||||| || || | ||||| || ||||| || | || |||| ||| Sbjct 7369 ACTCTCAGATCGTCAGTGGGGCGATGAGCCGAGAGCAGGCTGCGCTGGTCTTTAGCCTGT 7428 Query 884 CGGTGAAGATGGTTAACCTGAACCCCAAGCTGCAGGAGATTGTGCACATTACGCCCAGCG 943 |||| || ||| |||| || |||||| ||| ||||| |||||||| || | ||||||| Sbjct 7429 CGGTCAAAATGATTAATCTTAACCCCGCGCTACAGGACATTGTGCATATCATTCCCAGCG 7488 Query 944 GCAAAAAGCTGATCGGCCTGCCGTGTAACGTCGAATACAAGGCTTTATCCGCAGAAGGTA 1003 | || |||||| || || ||||| || || |||||||| | |||| || |||| Sbjct 7489 GTAAGCGGCTGATTGGTACCCCTTGTAATGTTGAGTACAAGGCGCTGGCCGCCGAGGGTA 7548 Query 1004 AGACGACGCACGGCCTTTCCCCCATTCTGGCCATTCTCGATGAAACAGGGCAGGT--TAG 1061 | || | ||||| ||||| || | ||||||||||| |||||| |||||||| ||| Sbjct 7549 AAACCGCACACGGTCTTTCTCCAGTGCTGGCCATTCTGGATGAAGTGGGGCAGGTAGTAG 7608 Query 1062 GGGCCCGCAGGATGATTTTATCGATGCAATAACTACGGCGCAGGGGGCTCATGAAAACCC 1121 | | ||||| ||||||| | || || || ||| | || ||||| ||||| | || Sbjct 7609 GTCCGCGCAG--TGATTTTGTTGACGCCATTGTTACCTCACAAGGGGCGCATGAGACACC 7666 Query 1122 GCTGCTAATCGTTATCAGTACGCAGGCAGCAAACGATGCTGACCTGCTTAGCATCTGGAT 1181 |||| || | ||||||||| ||||| || ||||| || |||||| | ||| | ||||| Sbjct 7667 TTTGCTGATTGCTATCAGTACCCAGGCGGCCAACGACGCCGACCTGTTGAGCGTGTGGAT 7726 Query 1182 TGATGATGCGGTCAAATCGAAAGATCCGCACATCGTGTGCCACGTTTATGAAGCGCCAAA 1241 |||||| |||| | || ||||| || || || ||||| || || || ||| Sbjct 7727 TGATGACGCGGCAACTTCTGGCGATCCACATATTGTTTGCCATGTGCATACTGCCGAAAA 7786 Query 1242 AGACGCTGATATCAGTAAACGCGAGTCCTGGCTGGCTGCGAACCCGGCACTGGGAACATT 1301 |||||| || || | | || | | |||| || || || ||||| ||||||| || Sbjct 7787 AGACGCCGACATTATGGATCGGGCTGCATGGCGTGCCGCTAATCCGGCGTTGGGAACCTT 7846 Query 1302 CAGGTCAGAAAAAGACATGGCGCGCCAGGCTGAGAAAGCTGGCCGA--ATGCCAAGCTTC 1359 | ||| | || |||| ||||| ||| || | || | ||| ||||| ||| Sbjct 7847 TCGTTCACTGGACGAGATGGAGCGCCGGGCAGAAGAGGC--GACGAGGATGCCCAGCAGT 7904 Query 1360 GAAAACACCTTCCGAAACCTCAACCTCAATCAGCGCGTGTCTACCGTATCGCCGTTTATC 1419 ||||| ||||| || || ||||| || ||||||||||| || || || || ||||| || Sbjct 7905 GAAAATACCTTTCGTAATCTCAATCTAAATCAGCGCGTATCCACTGTGTCACCGTTCGTC 7964 Query 1420 TCCCGCAGCGTGTGGG-AGC---TTTGCGGA--GAGAT---GCCGATTAACACCCCGAGG 1470 ||||| | || |||| ||| | | | || || || ||| | | || Sbjct 7965 TCCCGTAATGTTTGGGAAGCCAGTATTCTGAAGGACATTCGTCCGGGCATGATTGTTGGG 8024 Query 1471 AAGTGGTACGCGGGGCTGGATCTGTCAGCCAGGAACGACTTAACGGCGCTGGTTATCGCT 1530 |||| ||||||||||| || ||||||| | ||||||| | || |||||||| || | Sbjct 8025 GAGTGCTACGCGGGGCTCGACCTGTCAGAAAAGAACGACCTTACCGCGCTGGTGATTGTG 8084 Query 1531 GGTGAAGCAGATGATGGTGTCTGGGATGTTTTCCCCTTCTTCTGGACACCGCAAAAGACT 1590 || | | | || | | |||| || ||||| ||||||||||||||| ||||| Sbjct 8085 GGACAGGATAAAGAGCGCGACTGGCTGGTATTCCCGTTCTTCTGGACACCGGGTAAGAC- 8143 Query 1591 CTTG-AAGAGCGAACCAAAACGGACCGAGCACCATATGACGTTTGGG 1636 |||| || || ||| || || || || ||||| ||||||| Sbjct 8144 CTTGCTCGACCGGGCCAGGCGAGATCGCGCCCCTTATGATGTTTGGG 8190 Score = 116 bits (128), Expect = 1e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 40076 ATGTGCGAGCAGCAGGGGCGCATAACACCAGCAACGGTGGTCGACCATATCGTGCCCCAC 40135 |||||| | ||||||| || |||||||| || || || ||||| ||| | || ||| Sbjct 6264 ATGTGCCACGAGCAGGGACGGATAACACCCGCTGTCGTTGTTGACCACATCATTCCGCAC 6323 Query 40136 AAACTGAAAGATGCGCTTAAGTCAGGTAACCCTCTGGCCATATCGAAAGCACAGCTCCTG 40195 ||||| ||||| ||| | ||||| || || ||| ||| | || ||||| | Sbjct 6324 AAACTTAAAGAAGCGTTGAAGTCTGGCGACAAGGCGGCGATAGCAAAGGCACAAACATTA 6383 Query 40196 TTCTGGAGTAAAGAGAACTGGCAGCCACTGTGCAAAGCGCATCATGACTCAACGAAACAG 40255 ||||||| |||||||||||||||| ||||||| ||||||| || || ||||| Sbjct 6384 TTCTGGAATAAAGAGAACTGGCAGGGACTGTGCGTCCCGCATCACTCATCGACTAAACAA 6443 Query 40256 AGAATGGAGAAGAGCGGCGCGGTAATAGGTTGTGATGCCAACGGCTACCCGCTCGATCC 40314 |||||||| ||| | | | ||| || || || |||| || || || |||||||| Sbjct 6444 AGAATGGAAAAGCGGGACAAGGTCATCGGCTGCGATGAGAATGGTATGCCTCTCGATCC 6502 >seq4809 Length=3389 Score = 93.3 bits (102), Expect = 1e-14 Identities = 227/339 (67%), Gaps = 10/339 (3%) Strand=Plus/Plus Query 34629 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 34688 |||||||| |||| ||| |||| | | ||| | || |||||| |||||||| | Sbjct 95 ACAAGGACACATGGCGAACCCCGCCCGAGGTCTTTCAGGCGCTGGATGCGGAGTTTGGCT 154 Query 34689 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGTGCTCACTGGCTAACTGAGG 34748 ||| || ||| | || ||| | || | ||| | |||||| || || || |||| | Sbjct 155 TCTACCTCGATGCCGCCGCGGACCACGACAATACCCTGTGTCGTC--TG--TATCTGACG 210 Query 34749 CC----GACGACGCGCTCAATTCTGAGTGGGTAAGCCACGGTGCAATCTGGAATAACCCA 34804 || || || || || | ||| ||| ||| ||| || |||| || || Sbjct 211 CCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGCACCGGCGCCATCTTCTGCAATCCC 270 Query 34805 CCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGA 34864 ||||||||||||||| | || ||||| || ||||| ||||||||| || | ||| Sbjct 271 CCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCTGCTGAGCAGAGCCGCAAGCAGAAT 330 Query 34865 CAGACGGTAGTGATGCTTGTGCCAGAGGATATGTCAGTCGGATGGTTCAGCA-AGGCTCT 34923 | ||||| || ||||| |||| | ||||| || ||||||||| ||| ||||| Sbjct 331 AAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCGACGGGATGGTTC-GCACTGGCTCA 389 Query 34924 GGAGAGTGTTGACGAAGTTCGTATTATCACTGATGGACG 34962 | | | ||||| || || || | ||||| || || || Sbjct 390 GAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGGGCG 428 Score = 93.3 bits (102), Expect = 1e-14 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 36174 GGAGGCTGCTTAATGGCTAATCTACGCAAAGAAGCACGCGGCAGAGAATGCCAGGTACGT 36233 ||||| ||| ||||| ||||| ||||| || | ||| |||| || ||||| | Sbjct 572 GGAGGTAGCT--ATGGCGAATCTTAAAAAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGG 629 Query 36234 ATTTACGGCGTATGCAATGGTAATCCTGAAACTACAGTTCTGGCACATTACCGGATGGCT 36293 | | || | || || ||||| ||||||| ||| ||||| ||||||| ||| | Sbjct 630 CTCTCGGGTATCTGTAACGGTAACACTGAAACCGTAGTGCTGGCCTATTACCGAATGTCC 689 Query 36294 GGAATTTGCGGAACGGGAATGAAGCCTGACGACCTGATCGGCGCATGG 36341 || |||||||| || || ||||||||||||||||| | ||||||||| Sbjct 690 GGCATTTGCGGCACAGGCATGAAGCCTGACGACCTTTTTGGCGCATGG 737 >seq5862 Length=3465 Score = 89.7 bits (98), Expect = 1e-13 Identities = 226/339 (67%), Gaps = 10/339 (3%) Strand=Plus/Plus Query 34629 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 34688 |||||||| |||| ||| |||| | | || | || |||||| |||||||| | Sbjct 23 ACAAGGACACATGGCGAACCCCGCACGAGGTCTTCCAGGCGCTGGATGCGGAGTTTGGCT 82 Query 34689 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGTGCTCACTGGCTAACTGAGG 34748 ||| || ||| | || ||| | || | ||| | |||||| || || || |||| | Sbjct 83 TCTACCTCGATGCCGCCGCGGACCACGACAATACCCTGTGTCGTC--TG--TATCTGACG 138 Query 34749 CC----GACGACGCGCTCAATTCTGAGTGGGTAAGCCACGGTGCAATCTGGAATAACCCA 34804 || || || || || | ||| ||| ||| ||| || |||| || || Sbjct 139 CCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGCACCGGCGCCATCTTCTGCAATCCC 198 Query 34805 CCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGA 34864 ||||||||||||||| | || ||||| || ||||| ||||||||| || | ||| Sbjct 199 CCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCTGCTGAGCAGAGCCGCAAGCAGAAT 258 Query 34865 CAGACGGTAGTGATGCTTGTGCCAGAGGATATGTCAGTCGGATGGTTCAGCA-AGGCTCT 34923 | ||||| || ||||| |||| | ||||| || ||||||||| ||| |||| | Sbjct 259 AAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCGACGGGATGGTTC-GCACAGGCACA 317 Query 34924 GGAGAGTGTTGACGAAGTTCGTATTATCACTGATGGACG 34962 | | | ||||| || || || | ||||| || || || Sbjct 318 GAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGGGCG 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130124841471168