Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019711.1 Length=47288 Score E Sequences producing significant alignments: (Bits) Value seq6242 134 4e-27 seq4809 84.2 7e-12 >seq6242 Length=2873 Score = 134 bits (148), Expect = 4e-27 Identities = 227/323 (70%), Gaps = 13/323 (4%) Strand=Plus/Minus Query 40553 AGCATTGAAATCGCTGAGTTGGTGGGAAGTCGTCATGACAAGGTGAAACAATCTATTGAA 40612 ||| | || ||| | || ||||| || |||||||| ||||| | ||||| ||||||||| Sbjct 639 AGCCTCGACATCACGGAATTGGTTGGTAGTCGTCACGACAAACTTAAACAGTCTATTGAA 580 Query 40613 CGACTGGCGGCTCGAGGTGTGATCCGAAATCCCCCAATGGTGGTTTTCGAAAA-AATCAA 40671 || |||||| || || || | | |||| |||||| | | || || || ||| Sbjct 579 AGATTGGCGGAGAAGGGAGTAATTCAACTTCCCTCAATGGAGAAAGTTGAGAATAAACAA 520 Query 40672 TAACTTAGG-ATTACTTCGTGGCGTAGAGGCTTACGTTTTTGAGGGCGAACAAGGTAAGC 40730 || ||| | || ||| | ||||||||| ||||||||| ||||||||||||| Sbjct 519 TAGAATAGCCACAAC--CGTTTTATGGAGGCTTACCATTTTGAGGGTGAACAAGGTAAGC 462 Query 40731 GAGACAGCATTATTGTCGTCGCTCAGTTGTCGCCGGAATTCACCGCTCGTCTTGTTGACC 40790 | |||||||| ||||| ||||| || | || || ||||| ||||| | | || || | Sbjct 461 GTGACAGCATCATTGTTGTCGCCCAACTTTCCCCCGAATTTACCGCCAGATTAGTAGATC 402 Query 40791 GTTGGCGAGAGCTTG--AAGGGGCAACCGCGAAAATC-----CCACAAACCTTCTCTGAA 40843 |||||| || || | || |||| |||||||| || ||||||||||| ||| Sbjct 401 GTTGGCAGGAACTGGAAAATACTCAAC--CGAAAATCCGGTACCTCAAACCTTCTCAGAA 344 Query 40844 GCATTGCGCCTCGCGGCTGACCT 40866 ||||| ||||| || || || Sbjct 343 GCATTAATGCTCGCCGCCGAACT 321 >seq4809 Length=3389 Score = 84.2 bits (92), Expect = 7e-12 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 41251 AAAGAAGCACGCGGCAGAGAATGTCAGGTACGTATTTACGGCGTATGCAATGGCAATCCT 41310 ||||| || | ||| |||| |||||||| | | | || | || || || || || Sbjct 597 AAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGGCTCTCGGGTATCTGTAACGGTAACACT 656 Query 41311 GAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGGAACGGGAATGAAACCT 41370 ||||| ||| ||||| ||||||| ||| | || |||||||| || || ||||| ||| Sbjct 657 GAAACCGTAGTGCTGGCCTATTACCGAATGTCCGGCATTTGCGGCACAGGCATGAAGCCT 716 Query 41371 GACGACCTGATCGGCGCATGG 41391 |||||||| | ||||||||| Sbjct 717 GACGACCTTTTTGGCGCATGG 737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151170307816500