Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq1209 116 1e-21 >seq1209 Length=44547 Score = 116 bits (128), Expect = 1e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 33457 ATGGCATACAGTTTCCCATCAACTATGCGTTTGTTGTTCGTATCGACGGCTACAGTCGTA 33516 ||||| || | || ||||||| || || || | ||| || | |||||| || || || Sbjct 6742 ATGGCGTAGATCTTGCCATCAATAATACGCTTATCGTTGGTGTTGACGGCGACGGTGGTG 6683 Query 33517 CCATCCGGTATCACAGGTTCCATGCTGTCGCCAGTAGCAGGGAAACACAGGATGCCAGAC 33576 ||||| || || | ||||||||||||||||| | || |||||||| || | ||| || Sbjct 6682 CCATCGGGAATAAATGGTTCCATGCTGTCGCCCTTGGCCGGGAAACAGAGTACGCCGGAG 6623 Query 33577 CCATCTGTGTTAGCTCCAACGCGGCGGAGGGTTGCCTTTGAGAACCTGAGCTTAAAACCA 33636 ||||| | || || || |||||||| | ||| | || || |||| | |||||| || Sbjct 6622 CCATCGGAATTCGCACCGACGCGGCGTAAGGTCGATTTGGAAAACCGCAACTTAAACCCG 6563 Query 33637 TTGTGATCTTCGCTGTGTACGCGTCCATCGCCACACGCAAATTCAATAT 33685 || |||||||| | | ||| | | || || || |||||||||| Sbjct 6562 TTATGATCTTCATTCATGATGCGCCTAGTCCCGCAGGCGAATTCAATAT 6514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145021115612832