Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_019719.1
Length=41528
Score E
Sequences producing significant alignments: (Bits) Value
seq3409 785 0.0
seq7786 89.7 1e-13
seq4809 84.2 6e-12
>seq3409
Length=8325
Score = 785 bits (870), Expect = 0.0
Identities = 1147/1605 (71%), Gaps = 30/1605 (2%)
Strand=Plus/Plus
Query 11 TTTAACGCTAACCCGAtttttttAGTTTT-AAGGTGTTGACATATGGCAGATAAACGAAT 69
||||||||||||||||||||||||||||| |||||| | || |||||||| |||||||
Sbjct 6596 TTTAACGCTAACCCGATTTTTTTAGTTTTCAAGGTGCTCTCAAATGGCAGAAAAACGAAA 6655
Query 70 CCGTTCCGACAGTTCGGCGGCAGCGGTTCAGGCCATGAAAAATGCAGCTGTGGACACCAT 129
||| || |||||| || |||| ||| | ||||||||||||||||| | | ||||||| |
Sbjct 6656 CCGCTCTGACAGTGCGACGGCGGCGATCCAGGCCATGAAAAATGCGACCGGGGACACCCT 6715
Query 130 CGATCCGCCGTCCCATGCAGGTTTGGAGAAAAAAGCCGAACCATTCTGGCATGACAATAT 189
| || ||| | || || |||||||| ||||||||||| || || ||||||||||||||
Sbjct 6716 TCAGCCCCCGGCGCACGCGGGTTTGGAAAAAAAAGCCGAGCCTTTTTGGCATGACAATAT 6775
Query 190 CAGATCGAAAGCTCTGGACAGCTGGACGCCTGCCGACCTTCTAGCCGCCGTAGAACTTGC 249
|||| ||||| |||| |||||||| || || ||||| ||||||| || || || ||
Sbjct 6776 TCGATCCAAAGCATTGGATAGCTGGACACCCGCTGACCTGTTAGCCGCTGTTGAGCTGGC 6835
Query 250 TAATAATCAGCTCTATATCACCGTTTTACGCAAGGATTTACGCAAAGAAGAGCGCATACG 309
|||||||| | |||||||| | | ||||| |||||||| || ||||||||| | ||
Sbjct 6836 AAATAATCAACACTATATCAACATGTTACGGCGTGATTTACGTAACGAAGAGCGCGTGCG 6895
Query 310 CGGGGAGGAGCGAGACGAAGGCCTT---ATAAAAGACCTCCGCAAGCAAATTGTTGAGCT 366
||| |||| | || || | || || || ||||| | ||||| ||||| || || |
Sbjct 6896 CGGTGAGGCGAGAAAC-ATGG--TTGAAATTAAAGAATTGCGCAAACAAATCGTAGAATT 6952
Query 367 ACAACGAACTATCCTGGCTCAGCGCCGCGACCTCCAGATCCACTCCCACGCAACCAACGG 426
||| || | || |||| ||||| || || || || ||||| |||||||| ||||||||
Sbjct 6953 ACAGCGCGCGATTTTGGCACAGCGACGAGATCTGCAAATCCATTCCCACGCTACCAACGG 7012
Query 427 CGAAAGTCGCGACCAGAAGAAACGTAATCAG-AACGATCGTGATGCACGGAATACCAAAA 485
||||| ||||||||| | ||| || ||| || || | | || | | || |
Sbjct 7013 TGAAAGCCGCGACCAGC-GTAACAAAAACAGGAATGACAGGAACGCCAGAAGCACGGTCA 7071
Query 486 ACGAGCATCAGGACCAGGACGATAACCTGATCGCCTTTCCCAAGCACGGATAAAAGACT- 544
| ||||| | | |||||||| |||||||| ||||| || || ||| | |
Sbjct 7072 GTGGTCATCAACGCGAAGACGATAATCTGATCGCGTTTCCAAAACAT---TAAGGGGCAT 7128
Query 545 --ATGACGCGAGGTGAGCGTGTAATAGCGTTCATTGAGCGCTTTTGCATCGTGCCAGAAG 602
||||||||||||||||| || ||||||||||||||||||| |||||| ||||| ||||
Sbjct 7129 TCATGACGCGAGGTGAGCGCGTGATAGCGTTCATTGAGCGCTATTGCATTGTGCCGGAAG 7188
Query 603 GCAAGCTTATCGGCCAACCTATGCGGTTGGACCCCTTTCAGAAAGATTTCATCCTGGCGG 662
||||| ||||||| || || ||| | | || ||| |||||||| || | || | |
Sbjct 7189 GCAAGTTTATCGGACAGCCGATGAAGCTTGATGGCTTCCAGAAAGACTTTCTGCTTGATG 7248
Query 663 TTTACGACAATCCAGCCGGAACGGATATGGCGATCCTCTCCATCGCCCGAAAAAATGGTA 722
| || ||||| || | || || | ||| || | |||||||||||| || || |
Sbjct 7249 TCTATGACAACCCGGTGGGCACCAGCAGGGCAATTTTAAGCATCGCCCGAAAGAACGGGA 7308
Query 723 AGACTGGCCTGATTGCCGGAATTCTGCTGGCTCACCTGGTGGGGCCTGAAGCGGTGCAGA 782
| || || | ||||| ||||| || || ||||||||||| || || ||||||||||| |
Sbjct 7309 AAACCGGGTTAATTGCTGGAATACTTCTTGCTCACCTGGTTGGCCCAGAAGCGGTGCAAA 7368
Query 783 ACACGCAGATTGTCAGCGGTGCACTCAGCCGGGAACAGGCGGCCATCGTTTTTAACCTCG 842
|| | ||||| ||||| || || | ||||| || ||||| || | || |||| |||
Sbjct 7369 ACTCTCAGATCGTCAGTGGGGCGATGAGCCGAGAGCAGGCTGCGCTGGTCTTTAGCCTGT 7428
Query 843 CGGTGAAGATGGTTAACCTGAACCCCAAGCTGCAGGAGATTGTGCACATTACGCCCAGCG 902
|||| || ||| |||| || |||||| ||| ||||| |||||||| || | |||||||
Sbjct 7429 CGGTCAAAATGATTAATCTTAACCCCGCGCTACAGGACATTGTGCATATCATTCCCAGCG 7488
Query 903 GCAAAAAGCTGATCGGCCTGCCGTGTAACGTCGAATACAAGGCTTTATCCGCAGAAGGTA 962
| || |||||| || || ||||| || || |||||||| | |||| || ||||
Sbjct 7489 GTAAGCGGCTGATTGGTACCCCTTGTAATGTTGAGTACAAGGCGCTGGCCGCCGAGGGTA 7548
Query 963 AGACGACGCACGGCCTTTCCCCCATTCTGGCCATTCTCGATGAAACAGGGCAGGTTAGGG 1022
| || | ||||| ||||| || | ||||||||||| |||||| |||||||| |
Sbjct 7549 AAACCGCACACGGTCTTTCTCCAGTGCTGGCCATTCTGGATGAAGTGGGGCAGGTAGTAG 7608
Query 1023 GTCCGCAGGATGATTTTATCGATGCAATAACTACGGCGCAGGGGGCTCATGAAAACCCGC 1082
|||||| ||||||| | || || || ||| | || ||||| ||||| | ||
Sbjct 7609 GTCCGCGCAGTGATTTTGTTGACGCCATTGTTACCTCACAAGGGGCGCATGAGACACCTT 7668
Query 1083 TGCTAATCGTTATCAGTACGCAGGCAGCAAACGATGCTGACCTGCTTAGCATCTGGATTG 1142
|||| || | ||||||||| ||||| || ||||| || |||||| | ||| | |||||||
Sbjct 7669 TGCTGATTGCTATCAGTACCCAGGCGGCCAACGACGCCGACCTGTTGAGCGTGTGGATTG 7728
Query 1143 ATGATGCGGTCAAATCGAAAGATCCGCACATCGTGTGCCACGTTTATGAAGCGCCAAAAG 1202
|||| |||| | || ||||| || || || ||||| || || || |||||
Sbjct 7729 ATGACGCGGCAACTTCTGGCGATCCACATATTGTTTGCCATGTGCATACTGCCGAAAAAG 7788
Query 1203 ACGCTGATATCAGTAAACGCGAGTCCTGGCTGGCTGCGAACCCGGCACTGGGAACATTCA 1262
|||| || || | | || | | |||| || || || ||||| ||||||| ||
Sbjct 7789 ACGCCGACATTATGGATCGGGCTGCATGGCGTGCCGCTAATCCGGCGTTGGGAACCTTTC 7848
Query 1263 GGTCAGAAAAAGACATGGCGCGCCAGGCTGAGAAAGCTTGCCGA--ATGCCAAGCTTCGA 1320
| ||| | || |||| ||||| ||| || | || | ||| ||||| ||| ||
Sbjct 7849 GTTCACTGGACGAGATGGAGCGCCGGGCAGAAGAGGC--GACGAGGATGCCCAGCAGTGA 7906
Query 1321 AAACACCTTCCGAAACCTCAACCTCAATCAGCGCGTGTCTACCGTATCGCCGTTTATCTC 1380
||| ||||| || || ||||| || ||||||||||| || || || || ||||| ||||
Sbjct 7907 AAATACCTTTCGTAATCTCAATCTAAATCAGCGCGTATCCACTGTGTCACCGTTCGTCTC 7966
Query 1381 CCGCAGCGTGTGGG-AGC---TTTGCGGA--GAGAT---GCCGATTAACACCCCGAGGAA 1431
||| | || |||| ||| | | | || || || ||| | | || |
Sbjct 7967 CCGTAATGTTTGGGAAGCCAGTATTCTGAAGGACATTCGTCCGGGCATGATTGTTGGGGA 8026
Query 1432 GTGGTACGCGGGGCTGGATCTGTCAGCCAGGAACGACTTAACGGCGCTGGTTATCGCTGG 1491
||| ||||||||||| || ||||||| | ||||||| | || |||||||| || | ||
Sbjct 8027 GTGCTACGCGGGGCTCGACCTGTCAGAAAAGAACGACCTTACCGCGCTGGTGATTGTGGG 8086
Query 1492 TGAAGCAGATGATGGTGTCTGGGATGTTTTCCCCTTCTTCTGGACACCGCAAAAGACTCT 1551
| | | || | | |||| || ||||| ||||||||||||||| ||||| ||
Sbjct 8087 ACAGGATAAAGAGCGCGACTGGCTGGTATTCCCGTTCTTCTGGACACCGGGTAAGAC-CT 8145
Query 1552 TG-AAGAGCGAACCAAAACGGACCGAGCACCCTATGACGTTTGGG 1595
|| || || ||| || || || || ||||| |||||||
Sbjct 8146 TGCTCGACCGGGCCAGGCGAGATCGCGCCCCTTATGATGTTTGGG 8190
Score = 120 bits (132), Expect = 8e-23
Identities = 170/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 40940 ATGTGCGAGCAGCAGGGGCGCATAACACCAGCAACGGTGGTCGACCATATCGTGCCCCAC 40999
|||||| | ||||||| || |||||||| || || || ||||| ||| | || |||
Sbjct 6264 ATGTGCCACGAGCAGGGACGGATAACACCCGCTGTCGTTGTTGACCACATCATTCCGCAC 6323
Query 41000 AAACTGAAAGATGCGCTTAAGTCAGGTAACCCTCTGGCCATATCGAAAGCACAGCTCCTG 41059
||||| ||||| ||| | ||||| || || ||| ||| | || ||||| |
Sbjct 6324 AAACTTAAAGAAGCGTTGAAGTCTGGCGACAAGGCGGCGATAGCAAAGGCACAAACATTA 6383
Query 41060 TTCTGGAGTAAAGAGAACTGGCAGCCACTGTGCAAAGCGCATCATGACTCAACGAAACAG 41119
||||||| |||||||||||||||| ||||||| ||||||| || || |||||
Sbjct 6384 TTCTGGAATAAAGAGAACTGGCAGGGACTGTGCGTCCCGCATCACTCATCGACTAAACAA 6443
Query 41120 AGAATGGAGAAGAGCGGCGCGGTAATCGGTTGTGATGCCAACGGCTACCCGCTCGATCC 41178
|||||||| ||| | | | ||| ||||| || |||| || || || ||||||||
Sbjct 6444 AGAATGGAAAAGCGGGACAAGGTCATCGGCTGCGATGAGAATGGTATGCCTCTCGATCC 6502
>seq7786
Length=1398
Score = 89.7 bits (98), Expect = 1e-13
Identities = 113/151 (75%), Gaps = 7/151 (5%)
Strand=Plus/Minus
Query 39180 AAACGCGCATTCTCGTGCGCATATCAACCAAGAGCTTTTCGGGATATGAGACAGAGACAG 39239
|| || |||||| ||||| | | | | |||||||| || | |||| | ||| |||
Sbjct 1392 AACCGTGCATTCGCGTGCACTTCACTAG--AGAGCTTTCCGTAGTGTGAGTCTGAGGCAG 1335
Query 39240 GACGGTGGCTTACATCGTGCCGCTCTTGGGCTGTCCATGTCTGCGAGAACTGGCTCATAT 39299
| |||||| | || |||| ||||||| || ||| |||||||| || |||| ||||| |
Sbjct 1334 GGCGGTGGATCACCTCGTTCCGCTCTCGG-CTGCCCATGTCTACGCGAACAGGCTCGCAC 1276
Query 39300 CACCAAAAAGGTAAATACGATGTCCAATATC 39330
||| | ||||||||||||||| |||||||
Sbjct 1275 CAC--AGAAGGTAAATACGATG--CAATATC 1249
>seq4809
Length=3389
Score = 84.2 bits (92), Expect = 6e-12
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 35422 AAAGAAGCACGCGGCAGAGAATGTCAGGTACGTATTTACGGCGTATGCAATGGCAATCCT 35481
||||| || | ||| |||| |||||||| | | | || | || || || || ||
Sbjct 597 AAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGGCTCTCGGGTATCTGTAACGGTAACACT 656
Query 35482 GAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGGAACGGGAATGAAACCT 35541
||||| ||| ||||| ||||||| ||| | || |||||||| || || ||||| |||
Sbjct 657 GAAACCGTAGTGCTGGCCTATTACCGAATGTCCGGCATTTGCGGCACAGGCATGAAGCCT 716
Query 35542 GACGACCTGATCGGCGCATGG 35562
|||||||| | |||||||||
Sbjct 717 GACGACCTTTTTGGCGCATGG 737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132741927435060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |