Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019720.1 Length=44120 Score E Sequences producing significant alignments: (Bits) Value seq2784 699 0.0 seq11894 251 2e-62 seq4809 105 2e-18 seq5862 98.7 3e-16 >seq2784 Length=12453 Score = 699 bits (774), Expect = 0.0 Identities = 1178/1686 (70%), Gaps = 67/1686 (4%) Strand=Plus/Minus Query 35126 AATACCCCCTTACCCCCTAACGGGG---GTGGCGATGGGCAGGTTAAACC---TGAACGT 35179 ||||||||||||||||||| || | ||| || ||| || |||||| | |||| Sbjct 4338 AATACCCCCTTACCCCCTACGGGTGAAAGTGT-GAAGGG--GGGTAAACCCTCTAAACGA 4282 Query 35180 CGCAAGGCAGAACGAATCGACTACGAATCCTTCCTGAACGCCTACAACACCGAAGTCGGT 35239 || || | | |||| | ||||| || |||||||||||||||| | || ||| Sbjct 4281 ---AAATCAAACCCAATCAAATACGACGACTACCTGAACGCCTACAACGAAGCCGTGGGT 4225 Query 35240 GACAGACTGCCACACGCTGTTGCGGTCAA---CGAG---AAACGCAAAC--GCCGC-CTG 35290 ||||||||||| |||||||||| | ||| |||| ||||| |||| || || ||| Sbjct 4224 GACAGACTGCCTCACGCTGTTGAAGCCAATGACGAGCGAAAACGGAAACTTGCTGCTCTG 4165 Query 35291 AAGAAAATCATCCCGCAACTGAAAACGCCAAACGTGGACGGTTTCAGAGCGTATGTCAGG 35350 ||| || | || ||||||||| ||||||| |||| | || |||||| Sbjct 4164 GTTAAA----TCTC-----TGGCTACGCCAAACCTGGACGGCTTCAAGTCTTACGTCAGG 4114 Query 35351 GCGTTTGTGCATCAGGCCAAGCCGTTTTACTTCGGAGACAACGACACGGGCTGGACAGCT 35410 |||||| || | |||| |||||| |||| || |||||||| |||||| || Sbjct 4113 GCGTTTATGGCTGCTGCCAGGCCGTTCCACTTTGGCGACAACGATCGCGGCTGGGTGGCA 4054 Query 35411 GATTTTGATTATCTGCTG--AGGGAAGACTCGTTAACGGGAGTTCGGGAAGGGAAGTTTG 35468 |||||||||| ||||| | | ||||| | | ||| | | |||| || | | | Sbjct 4053 -ATTTTGATTACCTGCTTCAACGCAAGACCC--TGACGAAAATCAGGGAGGGTACGCT-- 3999 Query 35469 CAGACAGGGGGATTGCATGAGACAGGATATCGAAGCGAGCGTTATCGGTGGCCTGCTGAT 35528 ||||||||||||||||| || ||||| || ||||| ||||||| Sbjct 3998 ----------------ATGAGACAGGATATCGAGGCCAGCGTGATTGGTGGTTTGCTGAT 3955 Query 35529 TGGTGGATTAACGCCAACCGCCAGTGACGTTCTGGCAACGCTTGAGCCGGAAGCGTTTTC 35588 || || ||||||||||| || | ||| |||||||||||||| ||| ||||| | || Sbjct 3954 CGGCGGTTTAACGCCAACGGCAACTGAGGTTCTGGCAACGCTGGAGGCGGAAACCTTCGA 3895 Query 35589 AATTCCGCTCTACAGGAAAGCCTTCGAGGTTATCCGCAAGCAGGCGCGAAACAGAAACCT 35648 || ||| | |||| ||||| ||||| ||||| || ||||| || | ||||||| | Sbjct 3894 GATCCCGATTTACAAACGAGCCTATGAGGTGATCCGTAAACAGGCTCGCACCAGAAACAT 3835 Query 35649 AATCGACGCGCTGATGGTTGCCGAGGCGTGCGGAGAGGAGCATTTCACGTCAATCCTGAT 35708 || || | |||||||||||||||| || || || |||||||| | ||| || Sbjct 3834 GATTGATTCCCTGATGGTTGCCGAGGAATGTGGCGATGAGCATTTTGCCGACATCATGGA 3775 Query 35709 GACAAGCAAAAACTGCCCGAGTGCCGCAAACCTGAAGGGATATGCCGGAATGGTCGCGGA 35768 || | |||||| || || ||||||||| ||| ||||||| ||||| | || Sbjct 3774 AACGGCGCGTAGCTGCCCCAGCGCTGCAAACCTGCGGGGCTATGCCGACATGGTGACTGA 3715 Query 35769 TAACTATCACCGCCGTCTGGTGCTGGAAATCATGGATGAAATGCGTGAACCAATTCAGAG 35828 | || || ||||| || | | | || || ||||| | |||| | Sbjct 3714 AATGTACCAGCGCCGGATGTTCGTTTCGGCTGTTGACGAGATGCGCGGGACAATCGGAAA 3655 Query 35829 CGGAACCATCGACGCATCGAGTCAGGCGATGGATGAACTTGTAAAACGTCTCTCAGCTAT 35888 | | || || | | | ||||||||| |||||| | | || |||| || Sbjct 3654 TTCATCGATTGAAGTGGCTACCGTGGCGATGGACGAACTTATCGGCAGACTGTCAGGCAT 3595 Query 35889 CAGAAAGCCCCGTGACGAGGTTAAACCTGTACGGTTAGGGGAAATCATAACTGACTACAC 35948 ||||||| | || || || || || || | || || ||||| | || ||||| Sbjct 3594 TCGAAAGCCGAAGCAGGAAGTGAAGCCGGTTCGCCTTGGAGACATCATCTCCGAATACAC 3535 Query 35949 TGACACGCTTGACAGGCGTCTGAGGAACGGAGAAGAGTCAGATACCCTGAAGACCGGAAT 36008 ||||| | | | || |||| ||||| |||||||| || || ||||| || || || Sbjct 3534 CAACACGTTAGCGCGCCGCCTGAAAAACGGGGAAGAGTCCGACACGCTGAAAACAGGCAT 3475 Query 36009 CGAAGAACTTGACGCCATCACCGGAGGGATGAACGCGGAAGACCTGGTGATTATCGCCGC 36068 || || | ||||| |||||||| ||||||||||| || || | ||||| ||||||| Sbjct 3474 TGACGACTTGGACGCGATCACCGG-GGGATGAACGCTGAGGATTTAGTGATCGTCGCCGC 3416 Query 36069 TCGTCCTGGTATGGGGAAAACCGAACTGGCTCTGAAGATTGCCGAAGGCGTTGCAAGCCG 36128 ||| || || ||||||||| | |||||||| || ||| ||||||||||||| |||| ||| Sbjct 3415 TCGCCCCGGAATGGGGAAA-CTGAACTGGCGCTTAAGGTTGCCGAAGGCGTGGCAAACCG 3357 Query 36129 C--GTTATTCCTGGTTCTGACGTCCGGCGCGGGGTATTGATTTTCTCAATGGAAATGAGC 36186 |||| || || || ||| | || || |||||||| ||||||||||| Sbjct 3356 GAAGTTA--CCCGGGGAGAACCAGCGGAGGGGCGTTCTGATTTTCAGCATGGAAATGAGT 3299 Query 36187 GCATTGCAGATTGCAGAGCGAAGTATTGCCAACGCCGGGAGGATGTCGGTTAGCGTGCTG 36246 | | ||| | || ||||| || ||| || ||| |||||||||| || ||||| Sbjct 3298 TCTCTACAGGTAGCTGAGCGTTCGATAGCCGGGGCAGGGCGGATGTCGGTAAGTCTGCTG 3239 Query 36247 CGAAATCCTGCATCGATGGATGACGAAGGCTGGGCGCGCGTTGCTAACGGCATGAGTCAG 36306 || || ||| || | || || || || |||||| | ||| | |||| || | | Sbjct 3238 CGTAACCCTTCAAACCTTGACGATGAGGGATGGGCGAGGATTGTTGACGGGATTAACCGA 3179 Query 36307 CTTGCAGATTTGGATGTATGGGTAGTCGATGCCTCGCGGTTATCGGTCGAAGAAA---TA 36363 || |||||| | || |||||||| || ||||| | || | |||| || |||| || Sbjct 3178 CTGGCAGATCTTGACGTATGGGTCGTTGATGCTTGCCGCCTGACGGTGGAGGAAACCGTA 3119 Query 36364 CGCTCAATCGCAGAACGGCACAAACAGGAAAATCCAAACCTGTCACTCATCATGGCGGAT 36423 || || | ||| |||||||||||||| | ||| || || || |||||||| || Sbjct 3118 -GC-CATTGCCAGG-CGGCACAAACAGGAGCACCCAGCGCTATCGCTGATCATGGCAGAC 3062 Query 36424 TATCTTGGCCTGATTGAGAAGCCGAAAGCAGATCGCAACGACCTCGCAATTGCTCACATC 36483 ||||| || ||||| | || |||||||| || || |||||||| || || || || ||| Sbjct 3061 TATCTCGGGCTGATCGCCAAACCGAAAGCGGAGCGTAACGACCTTGCCATAGCCCATATC 3002 Query 36484 TCAGGAAGCCTGAAGGCGATGGCGAAAGAC-CTGAAAACACCGGTTATCTCCCTGAGTCA 36542 ||| | ||||| ||||| ||||| || ||| ||| ||| || || ||| | || |||| Sbjct 3001 TCATGGAGCCTAAAGGCAATGGCCAA-GACGCTGCGAACGCCAGTGATCGCGCTTGGTCA 2943 Query 36543 GCTTTCACGCGATGTTGAGAAGCGACCAAACAAACGCCCGACAAACGCAGATTTGCGTGA 36602 ||| ||||| || |||||||||||||| ||||| |||||||| ||||| ||||||||||| Sbjct 2942 GCTATCACGAGACGTTGAGAAGCGACCTAACAAGCGCCCGACCAACGCCGATTTGCGTGA 2883 Query 36603 TTCAGGAAGCATTGAACAGGACGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATA 36662 || || ||| |||||||||| || |||||||||||||||||||| || || ||||| || Sbjct 2882 CTCTGGCAGCCTTGAACAGGATGCCGACTCAATCATCATGCTCTACCGCGACGCGGTGTA 2823 Query 36663 TGACGAGAACAGTAGCGCCGCACCATTTGCTGAAATCATTGTGACAAAAAACCGTTTTGG 36722 | ||||||| |||||| ||||| || |||||||| || ||||||||||| ||||| Sbjct 2822 TAACGAGAATTCACCCGCCGCTCCATTCGCAGAAATCATCGTCACAAAAAACCGCTTTGG 2763 Query 36723 CTCGCTTGGTACGGTTTACCAGCGGTTCTGCAACGGACACTTTGTTGCATGTGACCAGGA 36782 ||| || || || || || ||||| ||| ||||| || || ||| || |||||||| Sbjct 2762 CTCACTCGGCACCGTCTATCAGCGATTCGTTAACGGTCATTTCATTGAGTGCGACCAGGA 2703 Query 36783 TGAAGC 36788 ||||| Sbjct 2702 CGAAGC 2697 >seq11894 Length=1188 Score = 251 bits (278), Expect = 2e-62 Identities = 241/306 (79%), Gaps = 2/306 (1%) Strand=Plus/Plus Query 36484 TCAGGAAGCCTGAAGGCGATGGCGAAAGAC-CTGAAAACACCGGTTATCTCCCTGAGTCA 36542 ||| | ||||| ||||| ||||| || ||| ||| ||| || || ||| | || |||| Sbjct 1 TCATGGAGCCTAAAGGCAATGGCCAA-GACGCTGCGAACGCCAGTGATCGCGCTTGGTCA 59 Query 36543 GCTTTCACGCGATGTTGAGAAGCGACCAAACAAACGCCCGACAAACGCAGATTTGCGTGA 36602 ||| ||||| || ||||||||||||| ||||| |||||||| ||||| ||||||||||| Sbjct 60 GCTATCACGAGACATTGAGAAGCGACCTAACAAGCGCCCGACCAACGCCGATTTGCGTGA 119 Query 36603 TTCAGGAAGCATTGAACAGGACGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATA 36662 || || ||| |||||||||| || |||||||||||||||||||| || || ||||| || Sbjct 120 CTCTGGCAGCCTTGAACAGGATGCCGACTCAATCATCATGCTCTACCGCGACGCGGTGTA 179 Query 36663 TGACGAGAACAGTAGCGCCGCACCATTTGCTGAAATCATTGTGACAAAAAACCGTTTTGG 36722 | ||||||| |||||| ||||| || |||||||| || ||||||||||| ||||| Sbjct 180 TAACGAGAATTCACCCGCCGCTCCATTCGCAGAAATCATCGTCACAAAAAACCGCTTTGG 239 Query 36723 CTCGCTTGGTACGGTTTACCAGCGGTTCTGCAACGGACACTTTGTTGCATGTGACCAGGA 36782 ||| || || || || || ||||| ||| ||||| || || ||| || |||||||| Sbjct 240 CTCACTCGGCACCGTCTATCAGCGATTCGTTAACGGTCATTTCATTGAGTGCGACCAGGA 299 Query 36783 TGAAGC 36788 ||||| Sbjct 300 CGAAGC 305 >seq4809 Length=3389 Score = 105 bits (116), Expect = 2e-18 Identities = 244/363 (67%), Gaps = 10/363 (3%) Strand=Plus/Plus Query 37936 TCAAATCAAATACGCCAGCACACGACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTG 37995 |||||||| | || | || | |||||||| |||| ||| |||| | | ||| Sbjct 71 TCAAATCACACACCAGACCAGAGCACAAGGACACATGGCGAACCCCGCCCGAGGTCTTTC 130 Query 37996 ATGCACTGGATATTGAGTTTGGATTCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTC 38055 | || |||||| |||||||| |||| || ||| | || ||| | || | ||| | | Sbjct 131 AGGCGCTGGATGCGGAGTTTGGCTTCTACCTCGATGCCGCCGCGGACCACGACAATACCC 190 Query 38056 TGTGCGCTCACTGGTTAACTGAGGCC----GACGACGCGCTAAATTCTGAGTGGATAAGC 38111 |||| || || || |||| ||| || || || || | ||| |||| ||| Sbjct 191 TGTGTCGTC--TG--TATCTGACGCCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGC 246 Query 38112 CACGGTGCAATCTGGAATAACCCACCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCC 38171 ||| || |||| || || ||||||||||||||| | || ||||| || ||||| Sbjct 247 ACCGGCGCCATCTTCTGCAATCCCCCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCT 306 Query 38172 GCTGAGCAGTGCATACAACAGCGACAGACGGTAGTGATGCTTGTGCCAGAGGATATGTCT 38231 ||||||||| || | ||| | ||||| || ||||| |||| | ||||| || Sbjct 307 GCTGAGCAGAGCCGCAAGCAGAATAAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCG 366 Query 38232 GTCGGATGGTTCAGCA-AGGCTCTGGAGAGTGTTGACGAAGTTCGCATCATCACTGATGG 38290 ||||||||| ||| ||||| | | | ||||| || || ||| ||||||| || || Sbjct 367 ACGGGATGGTTC-GCACTGGCTCAGAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGG 425 Query 38291 ACG 38293 || Sbjct 426 GCG 428 >seq5862 Length=3465 Score = 98.7 bits (108), Expect = 3e-16 Identities = 228/339 (67%), Gaps = 10/339 (3%) Strand=Plus/Plus Query 37960 ACAAGGACTGCTGGCAAACGCCGCTTTGGCTTTTTGATGCACTGGATATTGAGTTTGGAT 38019 |||||||| |||| ||| |||| | | || | || |||||| |||||||| | Sbjct 23 ACAAGGACACATGGCGAACCCCGCACGAGGTCTTCCAGGCGCTGGATGCGGAGTTTGGCT 82 Query 38020 TCTGGCTGGATTCGGCAGCGAGCGACAAAAATGCTCTGTGCGCTCACTGGTTAACTGAGG 38079 ||| || ||| | || ||| | || | ||| | ||||| || || || |||| | Sbjct 83 TCTACCTCGATGCCGCCGCGGACCACGACAATACCCTGTGTCGTC--TG--TATCTGACG 138 Query 38080 CC----GACGACGCGCTAAATTCTGAGTGGATAAGCCACGGTGCAATCTGGAATAACCCA 38135 || || || || || | ||| |||| ||| ||| || |||| || || Sbjct 139 CCAGAGGATGATGCCCTTGCCTGTGACTGGAGTAGCACCGGCGCCATCTTCTGCAATCCC 198 Query 38136 CCGTACAGCAATATCAGGCCGTGGGTGGAAAAAGCCGCTGAGCAGTGCATACAACAGCGA 38195 ||||||||||||||| | || ||||| || ||||| ||||||||| || | ||| Sbjct 199 CCGTACAGCAATATCCGCCCCTGGGTTGATAAAGCTGCTGAGCAGAGCCGCAAGCAGAAT 258 Query 38196 CAGACGGTAGTGATGCTTGTGCCAGAGGATATGTCTGTCGGATGGTTCAGCA-AGGCTCT 38254 | ||||| || ||||| |||| | ||||| || ||||||||| ||| |||| | Sbjct 259 AAAACGGTCGTTATGCTGCTGCCTGCGGATACCTCGACGGGATGGTTC-GCACAGGCACA 317 Query 38255 GGAGAGTGTTGACGAAGTTCGCATCATCACTGATGGACG 38293 | | | ||||| || || ||| ||||||| || || || Sbjct 318 GAAAACGGTTGATGAGGTGCGCTTCATCACCGAAGGGCG 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141034698606708