Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019769.1 Length=38964 Score E Sequences producing significant alignments: (Bits) Value seq3409 764 0.0 seq4809 93.3 1e-14 seq7786 89.7 1e-13 seq1206 82.4 2e-11 >seq3409 Length=8325 Score = 764 bits (846), Expect = 0.0 Identities = 1118/1564 (71%), Gaps = 33/1564 (2%) Strand=Plus/Plus Query 1 ATGGCAGATAAACGAATCCGTTCCGACAGTTCGGCGGCAGCGGTTCAGGCCATGAAAAAT 60 |||||||| ||||||| ||| || |||||| || |||| ||| | ||||||||||||||| Sbjct 6639 ATGGCAGAAAAACGAAACCGCTCTGACAGTGCGACGGCGGCGATCCAGGCCATGAAAAAT 6698 Query 61 GCAGCTGTGGACACCATCGATCCGCCGTCCCATGCAGGTTTGGAGAAAAAAGCCGAACCA 120 || | | ||||||| | | || ||| | || || |||||||| ||||||||||| || Sbjct 6699 GCGACCGGGGACACCCTTCAGCCCCCGGCGCACGCGGGTTTGGAAAAAAAAGCCGAGCCT 6758 Query 121 TTCTGGCATGACAATATCAGATCGAAAGCTCTGGACAGCTGGACGCCTGCCGACCTTCTA 180 || |||||||||||||| |||| ||||| |||| |||||||| || || ||||| || Sbjct 6759 TTTTGGCATGACAATATTCGATCCAAAGCATTGGATAGCTGGACACCCGCTGACCTGTTA 6818 Query 181 GCCGCCGTAGAACTTGCTAATAATCAGCTCTATATCACCGTTTTACGCAAGGATTTACGC 240 ||||| || || || || |||||||| | |||||||| | | ||||| |||||||| Sbjct 6819 GCCGCTGTTGAGCTGGCAAATAATCAACACTATATCAACATGTTACGGCGTGATTTACGT 6878 Query 241 AAAGAAGAGCGCATACGCGGGGAGGAGCGAGACGAAGGCCTT---ATAAAAGACCTCCGC 297 || ||||||||| | ||||| |||| | || || | || || || ||||| | ||| Sbjct 6879 AACGAAGAGCGCGTGCGCGGTGAGGCGAGAAAC-ATGG--TTGAAATTAAAGAATTGCGC 6935 Query 298 AAGCAAATTGTTGAGCTACAACGAACTATCCTGGCTCAGCGCCGCGACCTCCAGATCCAC 357 || ||||| || || |||| || | || |||| ||||| || || || || ||||| Sbjct 6936 AAACAAATCGTAGAATTACAGCGCGCGATTTTGGCACAGCGACGAGATCTGCAAATCCAT 6995 Query 358 TCCCACGCAACCAACGGCGAAAGTCGCGACCAGAAGAAACGTAATCAG-AACGATCGTGA 416 |||||||| |||||||| ||||| ||||||||| | ||| || ||| || || | | Sbjct 6996 TCCCACGCTACCAACGGTGAAAGCCGCGACCAGC-GTAACAAAAACAGGAATGACAGGAA 7054 Query 417 TGCACGGAATACCAAAAACGAGCATCAGGACCAGGACGATAACCTGATCGCCTTTCCCAA 476 || | | || | | ||||| | | |||||||| |||||||| ||||| || Sbjct 7055 CGCCAGAAGCACGGTCAGTGGTCATCAACGCGAAGACGATAATCTGATCGCGTTTCCAAA 7114 Query 477 GCACGGATAAAAGACT---ATGACGCGAGGTGAGCGTGTAATAGCGTTCATTGAGCGCTT 533 || ||| | | ||||||||||||||||| || ||||||||||||||||||| Sbjct 7115 ACAT---TAAGGGGCATTCATGACGCGAGGTGAGCGCGTGATAGCGTTCATTGAGCGCTA 7171 Query 534 TTGCATCGTGCCGGAAGGCAAGCTTATCGGCCAGCCAATGAGGCTGGACACCTTTCAGAA 593 |||||| ||||||||||||||| ||||||| ||||| |||| ||| || ||| ||||| Sbjct 7172 TTGCATTGTGCCGGAAGGCAAGTTTATCGGACAGCCGATGAAGCTTGATGGCTTCCAGAA 7231 Query 594 AGAATTCATCCTGGCGGTTTACGACAATCCAGCCGGAACGGATATGGCGATCCTCAGCAT 653 ||| || | || | || || ||||| || | || || | ||| || | ||||| Sbjct 7232 AGACTTTCTGCTTGATGTCTATGACAACCCGGTGGGCACCAGCAGGGCAATTTTAAGCAT 7291 Query 654 CGCCCGAAAAAATGGTAAGACTGGCCTGATTGCCGGAATTCTGCTGGCTCACCTGGTGGG 713 ||||||||| || || || || || | ||||| ||||| || || ||||||||||| || Sbjct 7292 CGCCCGAAAGAACGGGAAAACCGGGTTAATTGCTGGAATACTTCTTGCTCACCTGGTTGG 7351 Query 714 GCCTGAAGCGGTGCAGAACACGCAGATTGTCAGCGGTGCACTCAGCCGGGAACAGGCGGC 773 || ||||||||||| ||| | ||||| ||||| || || | ||||| || ||||| || Sbjct 7352 CCCAGAAGCGGTGCAAAACTCTCAGATCGTCAGTGGGGCGATGAGCCGAGAGCAGGCTGC 7411 Query 774 CATCGTTTTTAACCTCGCGGTGAAGATGGTTAACCTGAACCCCAAGCTGCAGGAGATTGT 833 | || |||| ||| |||| || ||| |||| || |||||| ||| ||||| ||||| Sbjct 7412 GCTGGTCTTTAGCCTGTCGGTCAAAATGATTAATCTTAACCCCGCGCTACAGGACATTGT 7471 Query 834 GCACATTACGCCCAGCGGCAAAAAGCTGATCGGCCTGCCGTGTAACGTCGAATACAAGGC 893 ||| || | |||||||| || |||||| || || ||||| || || |||||||| Sbjct 7472 GCATATCATTCCCAGCGGTAAGCGGCTGATTGGTACCCCTTGTAATGTTGAGTACAAGGC 7531 Query 894 TTTATCCGCAGAAGGTAAGACGACGCACGGCCTTTCCCCCATTCTGGCCATTCTCGATGA 953 | |||| || ||||| || | ||||| ||||| || | ||||||||||| ||||| Sbjct 7532 GCTGGCCGCCGAGGGTAAAACCGCACACGGTCTTTCTCCAGTGCTGGCCATTCTGGATGA 7591 Query 954 AACAGGGCAGGT--TAGGGGCCCGCAGGATGATTTTATCGATGCAATAACTACGGCGCAG 1011 | |||||||| |||| | ||||| ||||||| | || || || ||| | || Sbjct 7592 AGTGGGGCAGGTAGTAGGTCCGCGCAG--TGATTTTGTTGACGCCATTGTTACCTCACAA 7649 Query 1012 GGGGCTCATGAAAACCCGCTGCTAATCGTTATCAGTACGCAGGCAGCAAACGATGCTGAC 1071 ||||| ||||| | || |||| || | ||||||||| ||||| || ||||| || ||| Sbjct 7650 GGGGCGCATGAGACACCTTTGCTGATTGCTATCAGTACCCAGGCGGCCAACGACGCCGAC 7709 Query 1072 CTGCTTAGCATCTGGATTGATGATGCGGTCAAATCGAAAGATCCGCACATCGTGTGCCAC 1131 ||| | ||| | ||||||||||| |||| | || ||||| || || || ||||| Sbjct 7710 CTGTTGAGCGTGTGGATTGATGACGCGGCAACTTCTGGCGATCCACATATTGTTTGCCAT 7769 Query 1132 GTTTATGAAGCGCCAAAAGACGCTGATATCAGTAAACGCGAGTCCTGGCTGGCTGCGAAC 1191 || || || ||||||||| || || | | || | | |||| || || || Sbjct 7770 GTGCATACTGCCGAAAAAGACGCCGACATTATGGATCGGGCTGCATGGCGTGCCGCTAAT 7829 Query 1192 CCGGCACTGGGAACATTCAGGTCAGAAAAAGACATGGCGCGCCAGGCTGAGAAAGCTTGC 1251 ||||| ||||||| || | ||| | || |||| ||||| ||| || | || | Sbjct 7830 CCGGCGTTGGGAACCTTTCGTTCACTGGACGAGATGGAGCGCCGGGCAGAAGAGGC--GA 7887 Query 1252 CGA--ATGCCAAGCTTCGAAAACACCTTCCGAAACCTCAACCTCAATCAGCGCGTGTCTA 1309 ||| ||||| ||| ||||| ||||| || || ||||| || ||||||||||| || | Sbjct 7888 CGAGGATGCCCAGCAGTGAAAATACCTTTCGTAATCTCAATCTAAATCAGCGCGTATCCA 7947 Query 1310 CCGTATCGCCGTTTATCTCCCGCAGCGTGTGGG-AGC---TTTGCGGA--GAGAT---GC 1360 | || || ||||| ||||||| | || |||| ||| | | | || || || | Sbjct 7948 CTGTGTCACCGTTCGTCTCCCGTAATGTTTGGGAAGCCAGTATTCTGAAGGACATTCGTC 8007 Query 1361 CGATTAACACCCCGAGGAAGTGGTACGCGGGGCTGGATCTGTCAGCCAGGAACGACTTAA 1420 || | | || |||| ||||||||||| || ||||||| | ||||||| | | Sbjct 8008 CGGGCATGATTGTTGGGGAGTGCTACGCGGGGCTCGACCTGTCAGAAAAGAACGACCTTA 8067 Query 1421 CGGCGCTGGTTATCGCTGGTGAAGCAGATGATGGTGTCTGGGATGTTTTCCCCTTCTTCT 1480 | |||||||| || | || | | | || | | |||| || ||||| ||||||| Sbjct 8068 CCGCGCTGGTGATTGTGGGACAGGATAAAGAGCGCGACTGGCTGGTATTCCCGTTCTTCT 8127 Query 1481 GGACACCGCAAAAGACTCTTG-AAGAGCGAACCAAAACGGACCGAGCACCCTATGACGTT 1539 |||||||| ||||| |||| || || ||| || || || || ||||| ||| Sbjct 8128 GGACACCGGGTAAGAC-CTTGCTCGACCGGGCCAGGCGAGATCGCGCCCCTTATGATGTT 8186 Query 1540 TGGG 1543 |||| Sbjct 8187 TGGG 8190 Score = 125 bits (138), Expect = 2e-24 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 38317 ATGTGCGAGCAGCAGGGGCGCATAACCCCAGCAACGGTGGTTGACCATATCGTGCCCCAC 38376 |||||| | ||||||| || ||||| || || || |||||||| ||| | || ||| Sbjct 6264 ATGTGCCACGAGCAGGGACGGATAACACCCGCTGTCGTTGTTGACCACATCATTCCGCAC 6323 Query 38377 AAACTGAAAGATGCGCTTAAGTCAGGTAACCCACTGGCCATATCGAAAGCACAGCTCCTG 38436 ||||| ||||| ||| | ||||| || || ||| ||| | || ||||| | Sbjct 6324 AAACTTAAAGAAGCGTTGAAGTCTGGCGACAAGGCGGCGATAGCAAAGGCACAAACATTA 6383 Query 38437 TTCTGGAGTAAAGAGAACTGGCAGCCACTGTGCAAAGCGCATCATGACTCAACGAAACAG 38496 ||||||| |||||||||||||||| ||||||| ||||||| || || ||||| Sbjct 6384 TTCTGGAATAAAGAGAACTGGCAGGGACTGTGCGTCCCGCATCACTCATCGACTAAACAA 6443 Query 38497 AGAATGGAGAAGAGCGGCACGGTAATAGGCTGTGATGCCAACGGCTACCCGCTCGATCC 38555 |||||||| ||| | | || ||| || ||||| |||| || || || |||||||| Sbjct 6444 AGAATGGAAAAGCGGGACAAGGTCATCGGCTGCGATGAGAATGGTATGCCTCTCGATCC 6502 >seq4809 Length=3389 Score = 93.3 bits (102), Expect = 1e-14 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 32650 GGAGGCTGCTTAATGGCTAACCTACGCAAAGAAGCGCGCGGCAGAGAATGCCAGGTACGT 32709 ||||| ||| ||||| || || ||||| || | ||| |||| || ||||| | Sbjct 572 GGAGGTAGCT--ATGGCGAATCTTAAAAAAGAGGCCAGAGGCCGAGAGTGTCAGGTGAGG 629 Query 32710 ATTTACGGCATATGCAATGGCAACCCTGAAACTACAGTTCTGGCACATTACCGGATGGCT 32769 | | || || || || || ||| ||||||| ||| ||||| ||||||| ||| | Sbjct 630 CTCTCGGGTATCTGTAACGGTAACACTGAAACCGTAGTGCTGGCCTATTACCGAATGTCC 689 Query 32770 GGAATTTGCGGAACGGGAATGAAACCTGACGACCTGATTGGCGCATGG 32817 || |||||||| || || ||||| ||||||||||| ||||||||||| Sbjct 690 GGCATTTGCGGCACAGGCATGAAGCCTGACGACCTTTTTGGCGCATGG 737 >seq7786 Length=1398 Score = 89.7 bits (98), Expect = 1e-13 Identities = 113/151 (75%), Gaps = 7/151 (5%) Strand=Plus/Minus Query 35834 AAACGCGCATTCTCGTGCGCATATCAACCAAGAGCTTTTCGGGATATGAGACAGAGACAG 35893 || || |||||| ||||| | | | | |||||||| || | |||| | ||| ||| Sbjct 1392 AACCGTGCATTCGCGTGCACTTCACTAG--AGAGCTTTCCGTAGTGTGAGTCTGAGGCAG 1335 Query 35894 GACGGTGGCTTACATCGTGCCGCTCTTGGGCTGTCCATGTCTGCGAGAACTGGCTCATAT 35953 | |||||| | || |||| ||||||| || ||| |||||||| || |||| ||||| | Sbjct 1334 GGCGGTGGATCACCTCGTTCCGCTCTCGG-CTGCCCATGTCTACGCGAACAGGCTCGCAC 1276 Query 35954 CACCAAAAAGGTAAATACGATGTCCAATATC 35984 ||| | ||||||||||||||| ||||||| Sbjct 1275 CAC--AGAAGGTAAATACGATG--CAATATC 1249 >seq1206 Length=31275 Score = 82.4 bits (90), Expect = 2e-11 Identities = 120/167 (72%), Gaps = 11/167 (7%) Strand=Plus/Plus Query 35812 GGGGCTTTTTTACATCTGCAGTAAA------CGCGCATTCTCGTGCGCATATCAACCAAG 35865 ||||||||||| | ||| |||||| || |||||| ||| || ||| || Sbjct 17910 GGGGCTTTTTTTCGCCTGTAGTAAATCAAACCGTGCATTCGCGT--ACACTTCACTAGAG 17967 Query 35866 AGCTTTTCGGGATATGAGACAGAGACAGGACGGTGGCTTACATCGTGCCGCTCTTGGGCT 35925 |||||| || | |||| | ||| |||| |||||| | || |||| |||||| | |||| Sbjct 17968 AGCTTTCCGTAGTGTGAGTCTGAGGCAGGGCGGTGGATCACCTCGTTCCGCTC-TCGGCT 18026 Query 35926 GTCCATGTCTGCGAGAACTGGCTCATATCACCAAAAAGGTAAATACG 35972 | |||||||| || |||| ||||| | ||| | |||||||| ||| Sbjct 18027 GCCCATGTCTACGCGAACAGGCTCGCACCAC--AGAAGGTAAAAACG 18071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124538738668044