Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq3504 168 1e-36 >seq3504 Length=7869 Score = 168 bits (186), Expect = 1e-36 Identities = 217/297 (73%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 122363 ATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGC-AGA 122421 |||||||| |||||||| || ||| | || | ||| | ||| ||| ||| ||| Sbjct 7446 ATGAAACAGTATCTGGAATTGATGCAGAAAGTGCTTGATGA-GGGAACGCCGAAGGGAGA 7504 Query 122422 CCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAA 122481 | | || ||||| || ||| | ||| | |||||| || ||||| || | |||||| | Sbjct 7505 CAGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAAGA 7564 Query 122482 AGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCT 122541 ||||| |||||||| || ||||| || || ||||| ||||| || ||||| | Sbjct 7565 CGGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTGTT 7624 Query 122542 GTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTG 122601 ||||||||||| || || |||||| | |||||| | ||||| || || || || || Sbjct 7625 GTGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATTTG 7684 Query 122602 GGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 |||||||||||| ||||| |||| |||| || ||||| ||||||||||| ||||| Sbjct 7685 GGATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGGCG 7741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777471253745200