Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq13965 127 4e-25 >seq13965 Length=1093 Score = 127 bits (140), Expect = 4e-25 Identities = 460/709 (65%), Gaps = 38/709 (5%) Strand=Plus/Minus Query 3062 GGTTCAGCTTCCGGCCCCGGATAGAGGTACAGCGCCGCCTCAACGGCATAATTTACGATA 3121 ||||| | |||||||||||||| ||| | ||| |||| |||| | ||| | || ||| Sbjct 973 GGTTCCGACTCCGGCCCCGGATACAGGAAAAGCTCCGCATCAATCGAATAGTCGACAATA 914 Query 3122 GCGGCCGACTGC--ACCGTGACGCGATCGGCCACCGGGCGCACGTTCTCATCGTTCAGCG 3179 | || |||| ||||| ||||| ||| ||| ||| || || | |||||||| | || Sbjct 913 TCCGC--GCTGCGAACCGTCACGCGGTCGCCCAGCGGTCGGACTTCTTCATCGTTAACCG 856 Query 3180 CGGCATCCACCACGGCCAGCAGGTCGGATGGGGCTTCGCCGTTACCCTCACGCGACAGCA 3239 |||| ||| |||||||||| || | | ||| ||||| || || |||||| | Sbjct 855 CGGCCGTCACGGCGGCCAGCAGCTCTGGCGAGGCGATGCCGTCGCCGTCGGTCGACAGGA 796 Query 3240 CCGTGACGGTGACGCA----GGCGGGCGACGGGCTGATGGCCGAGGCATCCGCCACGCGG 3295 || || | || || || || | ||||||| | ||| ||| || || || | Sbjct 795 ---TGGCGATCAC-CACCTCCGCCGGTGCCGGGCTGGTTGCCCTGGCGTCGGCAACCTTG 740 Query 3296 CCGTCGGCGCTTTTCGCATGATATTCGTAGGCACCGGTCGGCCCGGCCACGCTCAGCCCC 3355 ||| |||||| | | |||||| || || | | ||| ||||||||||||| ||| Sbjct 739 CCGCTGGCGCTGCGGGTAAAATATTCATACGCCGCCGACGGGCCGGCCACGCTCATGCCC 680 Query 3356 TCAAAGGCAGACGCCACGCGCAGCCGGAAATCGTCGTTACTTTCCATCACTGCGGGCGTC 3415 || || || || | ||||||| || | | |||| |||||||||||| || || Sbjct 679 TCGAACGCGGATTGCGCGCGCAGGCGCAGGGCTTCGTCACTTTCCATCAC----CGCATC 624 Query 3416 GGCGGGATGGTGGTATTGTCGGCCGGGGTAAGTGTCAGGCG---GGTAACGCCGTTGTTT 3472 || | || || | ||||||| | |||||||| ||| | || ||| Sbjct 623 GGACG--TGTCCGTTT------CCGGGGTGATCGTCAGGCGCTCGGT---GTCGAGGTTG 575 Query 3473 GCGCCGAGCTGGTCAAGGTCACCGTCACTGGCGTAGGCCACCATATTTGCCTGCGCCGCT 3532 ||| | || | ||| ||||| | | ||||| | || ||| || ||| | Sbjct 574 GCGGCCAGGTTGTCCAGGTCGGTGCCTTCGGCGTGGCTCAGCATGCAGGCGGCGGCCCCC 515 Query 3533 TCATTCACGCGCTGGCGCAGAATGACCTCGCGGTAGGCGTTTTCCTG---TAACAGCTTC 3589 || || | ||| |||||| | | ||||||||||| | |||| | || || Sbjct 514 TCGTTGATTCGCCGGCGCAACAGCAATTCGCGGTAGGCCATCGCCTGGGCGATCACGTT- 456 Query 3590 ACAATCGGCTCAGACTCCAGCGCCAGCGTGCGGGCAATGGTCGCCTGCTGCTCAGCCGGG 3649 | |||||| |||||||||| ||| | | ||||| | |||||||| |||| | || Sbjct 455 --GAGCGGCTCGGACTCCAGCGACAGGGCGGCGGCAACCGATGCCTGCTGGTCAG-CAGG 399 Query 3650 TAAAGC-GAAATCAGCGTGGCTTTGCGTTCGGCCAGCAGCGTTTCGTAATCCAGCACCTC 3708 || || | |||| | || ||| || | || | ||| ||| | || || ||| Sbjct 398 AAAGGCGGCGATCATCACCGCCTTGACGTCAACGAGGATCGTCTCGAAGTCGAGTGGCTC 339 Query 3709 AACCACATCGGGCGCAGGCAGCTGGCTCAGGTCAATGGTTGCCATAGTT 3757 | | | |||| |||||||| ||||||||| |||| ||| ||| Sbjct 338 GATGATCTGCGGCGATGGCAGCTGCGACAGGTCAATCGTTGGCATCGTT 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94464645684444