Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_019934.1 Length=39012 Score E Sequences producing significant alignments: (Bits) Value seq3409 856 0.0 >seq3409 Length=8325 Score = 856 bits (948), Expect = 0.0 Identities = 1164/1606 (72%), Gaps = 32/1606 (2%) Strand=Plus/Minus Query 17022 CCCAAACGTCATAGGGTGCGCGGTCCGTTTTGGTTCGCTCTT-CAAGAGTCTTTTGCGGT 17080 ||||||| ||||| || ||||| || ||| || || |||| ||||| |||| Sbjct 8190 CCCAAACATCATAAGGGGCGCGATCTCGCCTGGCCCGGTCGAGCAAG-GTCTTACCCGGT 8132 Query 17081 GTCCAGAAGAAGGGGAAAACATCCCAAACACCATCTTCTGCTTCACCAGCGATAACCAGC 17140 ||||||||||| ||||| || ||| | | |||| | | || | || |||||| Sbjct 8131 GTCCAGAAGAACGGGAATACCAGCCAGTCGCGCTCTTTATCCTGTCCCACAATCACCAGC 8072 Query 17141 GCCGTTAAGTCGTTTCTGGCTGACAGATCCAGCCCCGCGTACCACTTCCTCGGGGTGTTA 17200 || || | |||||| | ||||||| || ||||||||||| |||| || | | Sbjct 8071 GCGGTAAGGTCGTTCTTTTCTGACAGGTCGAGCCCCGCGTAGCACTCCCCAACAATCATG 8012 Query 17201 GTCGGC---ATCTC--TCCGCAAA---GCT-CCCACACGCTGCGGGAGATAAACGGCGAT 17251 ||| || || || | | | ||| |||| || | ||||||| ||||| || Sbjct 8011 CCCGGACGAATGTCCTTCAGAATACTGGCTTCCCAAACATTACGGGAGACGAACGGTGAC 7952 Query 17252 ACGGTAGAAACGCGCTGATTGAGGTTGAGGTTTCGGAAGGTGTTTTCGAAGCTTGGCAT- 17310 || || || ||||||||||| || ||||| || || ||||| ||||| ||| ||||| Sbjct 7951 ACAGTGGATACGCGCTGATTTAGATTGAGATTACGAAAGGTATTTTCACTGCTGGGCATC 7892 Query 17311 -TCGGCCTGCTTTCTCGGCCTGGCGCGCCATGTCTTTTTCTGACCTGAATGTTCCCAGCG 17369 ||| | || | || ||| ||||| |||| || | ||| | || ||||||| || Sbjct 7891 CTCGTC--GCCTCTTCTGCCCGGCGCTCCATCTCGTCCAGTGAACGAAAGGTTCCCAACG 7834 Query 17370 CCGGGTTCGCAGCCAGCCAGGACTCGCGTTTACTGATATCAGCGTCTTTTGGCGCTTCAT 17429 |||| || || || |||| | | || | | || || ||||||||| || || Sbjct 7833 CCGGATTAGCGGCACGCCATGCAGCCCGATCCATAATGTCGGCGTCTTTTTCGGCAGTAT 7774 Query 17430 AAACGTGGCATACGATGTGCGGATCTTTCGATTTGACCGCATCATCAATCCAGATGCTCA 17489 || ||||| || || || ||||| || | |||| ||||||||||| | ||||| Sbjct 7773 GCACATGGCAAACAATATGTGGATCGCCAGAAGTTGCCGCGTCATCAATCCACACGCTCA 7714 Query 17490 GCAGGTCAGCATCGTTTGCTGCCTGCGTACTGATAACAATCAGCAGCGGGTTTTCATGGG 17549 |||||| || ||||| || ||||| ||||||||| ||||||||| || | ||||| | Sbjct 7713 ACAGGTCGGCGTCGTTGGCCGCCTGGGTACTGATAGCAATCAGCAAAGGTGTCTCATGCG 7654 Query 17550 CACCCTGCGCGGTAGTTATTGCATCGATAAAATCATCCTGCGGCCCCCTA--ACCTGCCC 17607 | || || | |||| || || || | ||||||| ||||| |||| |||||||| Sbjct 7653 CCCCTTGTGAGGTAACAATGGCGTCAACAAAATCA--CTGCGCGGACCTACTACCTGCCC 7596 Query 17608 GGTTTCATCGAGAATAGCCAGAATGGGGGAAAGGCCGTGCGTGGTCTTACCTTCTGCGGA 17667 |||||| ||||| ||||| | || ||||| ||||| | ||| ||||| || |||| Sbjct 7595 CACTTCATCCAGAATGGCCAGCACTGGAGAAAGACCGTGTGCGGTTTTACCCTCGGCGGC 7536 Query 17668 TAAAGCCTTGTATTCAACGTTACACGGCAGGCCGATCAGCTTTTTGCCGCTCGGCGTAAT 17727 | |||||||| ||||| ||||| || || |||||| || ||||| || | || Sbjct 7535 CAGCGCCTTGTACTCAACATTACAAGGGGTACCAATCAGCCGCTTACCGCTGGGAATGAT 7476 Query 17728 GTGCACTATCTCCTGCAGACTGGGGCTCAGGTTAACCATCTTCACCGCGAGGTTAAAAAC 17787 ||||| || ||||| || |||| | || |||| ||| || |||| ||| |||| || Sbjct 7475 ATGCACAATGTCCTGTAGCGCGGGGTTAAGATTAATCATTTTGACCGACAGGCTAAAGAC 7416 Query 17788 GATGGCCGCCTGTTCCCGGCTAAGTGCACCGCTAACAATTTGCGTGTTCTGCACCGCTTC 17847 | || ||||| || ||||| | || || || || || || | ||| ||||||||||| Sbjct 7415 CAGCGCAGCCTGCTCTCGGCTCATCGCCCCACTGACGATCTGAGAGTTTTGCACCGCTTC 7356 Query 17848 TGGCCCCACCAGGTGAGCCAGCAGGATTCCGGCGATTAAGCCTGTCTTCCCATTTTTTCG 17907 ||| || ||||||||||| || || ||||| || ||||| || || ||||| || ||||| Sbjct 7355 TGGGCCAACCAGGTGAGCAAGAAGTATTCCAGCAATTAACCCGGTTTTCCCGTTCTTTCG 7296 Query 17908 TGCGATGCTGAGGATCGCCATATCCGTTCCGGCTGGATTGTCGTAAACCGCCAGGATGAA 17967 |||||||| | || ||| | || || | || ||||| || || | || | || Sbjct 7295 GGCGATGCTTAAAATTGCCCTGCTGGTGCCCACCGGGTTGTCATAGACATCAAGCAGAAA 7236 Query 17968 TTCTTTTTGAAAGGGGTCCAGCCTCATTGGGCGGCCGATAAGCTTGCCTTCCGGCACGAT 18027 ||||| || ||| || ||| |||| || | ||||||| ||||||||||||||| || Sbjct 7235 GTCTTTCTGGAAGCCATCAAGCTTCATCGGCTGTCCGATAAACTTGCCTTCCGGCACAAT 7176 Query 18028 GCAATAGCGCTCGATGAACGCTATTACACGCTCACCTCGCGTCAT---AGTCTTTTATCC 18084 |||||||||||| ||||||||||| || ||||||||||||||||| | | ||| Sbjct 7175 GCAATAGCGCTCAATGAACGCTATCACGCGCTCACCTCGCGTCATGAATGCCCCTTA--- 7119 Query 18085 GTGCTTGGGAAAGGCGATCAGGTTGTCGTCCTGGCCCTGATGCTCGTTTTTCGTGTTTCG 18144 || || ||||| |||||||| || ||||| | || ||||| | | |||| ||| Sbjct 7118 ATGTTTTGGAAACGCGATCAGATTATCGTCTTCGCGTTGATGACCACTGACCGTGCTTCT 7059 Query 18145 TGCATCACGATCATT-CTGATTGCGTTTCTTCTGGTCGCGACTTTCGCCGTTGGTTGCGT 18203 || | | ||||| ||| || ||| | ||||||||| ||||| |||||||| |||| Sbjct 7058 GGCGTTCCTGTCATTCCTGTTTTTGTTAC-GCTGGTCGCGGCTTTCACCGTTGGTAGCGT 7000 Query 18204 GGGAATGGATCTGCAGGTCACGTCGCTGAGCCAAAATGGTTCGCTGCAGCTCAACAATCT 18263 |||||||||| ||||| || |||||||| |||||||| | ||||| | || || || | Sbjct 6999 GGGAATGGATTTGCAGATCTCGTCGCTGTGCCAAAATCGCGCGCTGTAATTCTACGATTT 6940 Query 18264 GTTTGCGCAGGTCTTTGA--TAAGCCCTTCATCGCGACCCTCACCGCGGGCACTTTCTTC 18321 ||||||||| ||||| | | | || | || || |||||||||| | | ||||| Sbjct 6939 GTTTGCGCAATTCTTTAATTTCAACCATGTTTCTCG--CCTCACCGCGCACGCGCTCTTC 6882 Query 18322 TTTGCGCAAATCCTTGCGTAAAATGGTGATATAGAGTTGATTATTTGCCAGTTCGACAGC 18381 || || ||||| ||||| ||| |||||||| |||||||||||||||| || ||||| Sbjct 6881 GTTACGTAAATCACGCCGTAACATGTTGATATAGTGTTGATTATTTGCCAGCTCAACAGC 6822 Query 18382 AGCCAAAAGGTCAGAAGGCGTCCAACTGTCCAGTGCTTTTGATCTGATATTGTCATGCCA 18441 || || ||||||| || ||||| || |||| |||||| |||| |||||||||||||| Sbjct 6821 GGCTAACAGGTCAGCGGGTGTCCAGCTATCCAATGCTTTGGATCGAATATTGTCATGCCA 6762 Query 18442 GAATGGTTCGGCTTTTTTATCCAAACCTGCATGGGGCGGCGGATCAATGGTGTCCACAGC 18501 || || ||||||||||| |||||||| || || | ||| || | || ||||||| | | Sbjct 6761 AAAAGGCTCGGCTTTTTTTTCCAAACCCGCGTGCGCCGGGGGCTGAAGGGTGTCCCCGGT 6702 Query 18502 TGCGTTTTTCATGGCCTGAATCGCCGCTGCCGAACTATCGGAGCGGTTTCGTTTGTCTGC 18561 || |||||||||||||| |||||||| | || ||| || |||||||||||||| ||||| Sbjct 6701 CGCATTTTTCATGGCCTGGATCGCCGCCGTCGCACTGTCAGAGCGGTTTCGTTTTTCTGC 6642 Query 18562 CATATGTCAACACCTT-AAAACTaaaaaaaTCGGGTTAGCGTTAAA 18606 ||| || | |||||| ||||||||||||||||||||||||||||| Sbjct 6641 CATTTGAGAGCACCTTGAAAACTAAAAAAATCGGGTTAGCGTTAAA 6596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124692308504556