Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq126 89.7 3e-13 >seq126 Length=1333976 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074 |||||||||||| || || |||||| | | | |||| ||| || |||||||| |||| Sbjct 1331861 AAATTCTCCAGATAAGACCCTTCTTGTGTACATATTTGTAGTAAACGGTTCAAATGATTC 1331920 Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134 ||| || || | || || | ||||| ||||| |||||| ||||| || | ||||| Sbjct 1331921 ATTGTTGCCAAGTATCTGCGCTGTAGAAGCTGTAGGCATTGGTGCTAGTAGCAAGGAATT 1331980 Query 25135 TCTCAAACCATATT 25148 ||||| ||||| || Sbjct 1331981 TCTCAGACCATGTT 1331994 Score = 82.4 bits (90), Expect = 4e-11 Identities = 103/139 (74%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 26080 TCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCC 26139 ||||||||| || || ||| |||| || | |||||| ||| ||||||||||||| ||||| Sbjct 1319691 TCCACCTTGGTCCACATATTTTGCTGTATTATTGAACACTCTCAACATTGGAACCAATCC 1319632 Query 26140 AGTTGAAAATCCGTTTGTGCTATGAAT-CTTGGATCCTGTCGATCTAATATCGTGAGCAT 26198 |||||| || ||||| | | ||| || | ||| | | ||| ||| || ||| Sbjct 1319631 GTTTGAAACACCATTTGTTCCAGCAATAAATGTACCCT-TTGCTCTGATACAATGTACAT 1319573 Query 26199 GAATACCGATTCCACCAGC 26217 | | ||| ||||||||||| Sbjct 1319572 GGACACCTATTCCACCAGC 1319554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252989001132275