Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq126 89.7 3e-13
>seq126
Length=1333976
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074
|||||||||||| || || |||||| | | | |||| ||| || |||||||| ||||
Sbjct 1331861 AAATTCTCCAGATAAGACCCTTCTTGTGTACATATTTGTAGTAAACGGTTCAAATGATTC 1331920
Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134
||| || || | || || | ||||| ||||| |||||| ||||| || | |||||
Sbjct 1331921 ATTGTTGCCAAGTATCTGCGCTGTAGAAGCTGTAGGCATTGGTGCTAGTAGCAAGGAATT 1331980
Query 25135 TCTCAAACCATATT 25148
||||| ||||| ||
Sbjct 1331981 TCTCAGACCATGTT 1331994
Score = 82.4 bits (90), Expect = 4e-11
Identities = 103/139 (74%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 26080 TCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCC 26139
||||||||| || || ||| |||| || | |||||| ||| ||||||||||||| |||||
Sbjct 1319691 TCCACCTTGGTCCACATATTTTGCTGTATTATTGAACACTCTCAACATTGGAACCAATCC 1319632
Query 26140 AGTTGAAAATCCGTTTGTGCTATGAAT-CTTGGATCCTGTCGATCTAATATCGTGAGCAT 26198
|||||| || ||||| | | ||| || | ||| | | ||| ||| || |||
Sbjct 1319631 GTTTGAAACACCATTTGTTCCAGCAATAAATGTACCCT-TTGCTCTGATACAATGTACAT 1319573
Query 26199 GAATACCGATTCCACCAGC 26217
| | ||| |||||||||||
Sbjct 1319572 GGACACCTATTCCACCAGC 1319554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252989001132275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |