Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_021073.1
Length=107218
Score E
Sequences producing significant alignments: (Bits) Value
seq2248 194 1e-44
>seq2248
Length=16282
Score = 194 bits (214), Expect = 1e-44
Identities = 674/1040 (65%), Gaps = 30/1040 (3%)
Strand=Plus/Minus
Query 9839 ATGCAAGAGCGTGCTTCTACAGGTCGCATCTACATTCAGCACGTAGATCACTGTAACATT 9898
|||||||| || || ||| |||| || ||||||||||| || || ||||| || ||||
Sbjct 1098 ATGCAAGAACGCGCCTCTGCAGGCCGTATCTACATTCAACATGTCGATCATTGCAACACC 1039
Query 9899 AACGGTCCTTTCGATGAGCGCGTTGCACCAGTACGCCAATCAAACCTATGTATGGAAATC 9958
|| | || || || | | | ||||| || || || | ||||| || |||||||
Sbjct 1038 CACAGCCCGTTTGAACCGACCATCGCACCGGTGCGTCAGCCCAACCTGTGCCTGGAAATT 979
Query 9959 GCACTACCAACCAAACCGTTGAATAACGTCGATGATCCTGATGGTGAAGTTGCGCTATGT 10018
|| || |||||| | || || | ||||| | || | ||||| | ||||| ||
Sbjct 978 GCGCTGCCAACCCACCCTCTGGAAGACGTCAACGACGAAAAAGGTGAGATCGCGCTCTGC 919
Query 10019 ACTCTATCTGCATTCAACTTGGGTAAGATTGAATCGGTTGG-TGATTTTGAGCGTCTGTC 10077
|| || || || |||||| | || ||||||| | | | |||||| || | || |
Sbjct 918 ACCCTCTCCGCGTTCAACCTTGGCGC-ATTGAATAGCCTAGATGATTTGGAAGATTTGGC 860
Query 10078 TCGTATCGTTGTGCGTGCATTGGATAATCTGTTAGACTACCAAAACTACCCATTACCTGC 10137
||| | | || |||||| |||| ||||| ||||| ||| | ||||| | | ||
Sbjct 859 GCGTCTGGCAGTACGTGCACTGGACGCCCTGTTGGACTATCAAGATTACCCGATTCTGGC 800
Query 10138 CGCAGAACGTTCGACAATGCGCAGACGTAGCCTTGGTGTAGGTATTATCAATTACGCCCA 10197
||| |||| | ||| || | || | || || | || ||||||| | ||| |
Sbjct 799 CGCCAAACGCGGTGCTATGGGCCGCCGCACGCTCGGCATCGGCGTTATCAACTTTGCCTA 740
Query 10198 CTGGGTGGCTAAGAATGGCCTAAAATACAGTGACGGTAGCGCAAACAACAAGACGCATGA 10257
|| |||| || || ||| | ||| || || || || ||||| |||||| |
Sbjct 739 CTATCTGGCGAAAAACGGCGTGCGCTACTCCGATGGCAGTGCCAACAATCTGACGCACAA 680
Query 10258 GCTGATTGAAGCTATGCAGTTCTACTTGCTACAAGCATCAATGGAACTGGCTAAAGAGAA 10317
| ||||||| || |||| |||| |||| ||||| |||| || ||||| || |
Sbjct 679 GACCTTTGAAGCCATTCAGTACTACCTGCTGCAAGCCTCAAACGAGCTGGCGCGCGAACA 620
Query 10318 GGGTATGTGTTC-TGGATT--CGAAGACACTAAGTATGCCAAAGGTGTTATGCCAGTTGA 10374
|||| || | ||| || | ||| ||| |||||| || || |||| ||||
Sbjct 619 GGGTGCCTGCCCGTGGTTTGACCAAGCCACC---TATGCCCGTGGAGTGCTGCCTATTGA 563
Query 10375 TCGTTATAAGTCTGATGTCGACAACACCCACACAGCAGAACTACAGATGAATTGGAATTG 10434
|| || ||| | ||| || || || |||| | || ||| ||||
Sbjct 562 CACCTACAAACGCGATCTGGACGGCATTTGCA--GC-GAACC---GTTGCATTACGATTG 509
Query 10435 GT------TGCGTAATGAGATTGTCCATA---ATGGCCTACGTAACTCTACTCTATCTGC 10485
| |||| || | | || | | | || || |||||||| || || |||||
Sbjct 508 GGAAGCACTGCGC---GACAGTATCAAAACACACGGTCTGCGTAACTCCACGCTCTCTGC 452
Query 10486 ATTCATGCCTTCGGAAACATCTTCTCAGGTATCTAACGCAACAAACGGCATCGAACCACC 10545
|| ||||| |||||||| || || || | || ||||| || ||||| |||||||||||
Sbjct 451 GTTGATGCCGTCGGAAACCTCGTCACAAATTTCCAACGCCACCAACGGTATCGAACCACC 392
Query 10546 TCGTGGCTACATGTCAGTT--AAGCAGTCGAAGGATGGCATCTTAAAACAAATCGTACCG 10603
|| || |||| |||| ||| ||| || || ||||| || || | || |||
Sbjct 391 ACGCGGTCACAT--CAGTATCAAGGCGTCAAAAGACGGCATTTTGCGCCAGGTGGTGCCG 334
Query 10604 GGTTATGATAAATACAAAGACCAATACGAGTTACTATGGAATATCAAAGACAACACTGGT 10663
| ||| | | || || ||||| ||||| ||| | || |||| ||
Sbjct 333 GATTACAAAACCCTGAAGGATGCCTACGAATTACTGTGGGAAATGCCGAACAATGACGGC 274
Query 10664 TACTTGGAATTGGTTGCCATCATGCAGAAGTTTGTGGATCAGGCTATTTCAGCAAACACT 10723
||| || || |||||| | |||||||||||||| |||||||||||||| || |||||
Sbjct 273 TACCTGCAACTGGTTGGGCTGATGCAGAAGTTTGTCGATCAGGCTATTTCTGCCAACACC 214
Query 10724 AACTACGACCCAGAAAACTACCCAGAAAGTAAGGTTCCAATCAAAAAGTTATTGCAAGAT 10783
|||||||| || | || ||| | | || || || || ||| |||| || ||
Sbjct 213 AACTACGATCCGGCGCGCTTCCCGTCAGGAAAAGTGCCGATGAAACAGTTGCTGACTGAC 154
Query 10784 TTGGTGACATGTTATAGACTCGGCATCAAGACACTGTACTACCACAACACACGAGATGGT 10843
||| | || |||| |||| | || || ||||| || || ||||| || || |||
Sbjct 153 TTGCTTACCGCCTATAAGTTCGGGTTGAAAACGCTGTATTATCAAAACACCCGTGACGGT 94
Query 10844 GCTAGTGATGAACAGAAAGA 10863
|| || | |||| ||||
Sbjct 93 GCAGAAGACGCACAGGAAGA 74
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 342903675654203
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |