Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq2248 194 1e-44 >seq2248 Length=16282 Score = 194 bits (214), Expect = 1e-44 Identities = 674/1040 (65%), Gaps = 30/1040 (3%) Strand=Plus/Minus Query 9839 ATGCAAGAGCGTGCTTCTACAGGTCGCATCTACATTCAGCACGTAGATCACTGTAACATT 9898 |||||||| || || ||| |||| || ||||||||||| || || ||||| || |||| Sbjct 1098 ATGCAAGAACGCGCCTCTGCAGGCCGTATCTACATTCAACATGTCGATCATTGCAACACC 1039 Query 9899 AACGGTCCTTTCGATGAGCGCGTTGCACCAGTACGCCAATCAAACCTATGTATGGAAATC 9958 || | || || || | | | ||||| || || || | ||||| || ||||||| Sbjct 1038 CACAGCCCGTTTGAACCGACCATCGCACCGGTGCGTCAGCCCAACCTGTGCCTGGAAATT 979 Query 9959 GCACTACCAACCAAACCGTTGAATAACGTCGATGATCCTGATGGTGAAGTTGCGCTATGT 10018 || || |||||| | || || | ||||| | || | ||||| | ||||| || Sbjct 978 GCGCTGCCAACCCACCCTCTGGAAGACGTCAACGACGAAAAAGGTGAGATCGCGCTCTGC 919 Query 10019 ACTCTATCTGCATTCAACTTGGGTAAGATTGAATCGGTTGG-TGATTTTGAGCGTCTGTC 10077 || || || || |||||| | || ||||||| | | | |||||| || | || | Sbjct 918 ACCCTCTCCGCGTTCAACCTTGGCGC-ATTGAATAGCCTAGATGATTTGGAAGATTTGGC 860 Query 10078 TCGTATCGTTGTGCGTGCATTGGATAATCTGTTAGACTACCAAAACTACCCATTACCTGC 10137 ||| | | || |||||| |||| ||||| ||||| ||| | ||||| | | || Sbjct 859 GCGTCTGGCAGTACGTGCACTGGACGCCCTGTTGGACTATCAAGATTACCCGATTCTGGC 800 Query 10138 CGCAGAACGTTCGACAATGCGCAGACGTAGCCTTGGTGTAGGTATTATCAATTACGCCCA 10197 ||| |||| | ||| || | || | || || | || ||||||| | ||| | Sbjct 799 CGCCAAACGCGGTGCTATGGGCCGCCGCACGCTCGGCATCGGCGTTATCAACTTTGCCTA 740 Query 10198 CTGGGTGGCTAAGAATGGCCTAAAATACAGTGACGGTAGCGCAAACAACAAGACGCATGA 10257 || |||| || || ||| | ||| || || || || ||||| |||||| | Sbjct 739 CTATCTGGCGAAAAACGGCGTGCGCTACTCCGATGGCAGTGCCAACAATCTGACGCACAA 680 Query 10258 GCTGATTGAAGCTATGCAGTTCTACTTGCTACAAGCATCAATGGAACTGGCTAAAGAGAA 10317 | ||||||| || |||| |||| |||| ||||| |||| || ||||| || | Sbjct 679 GACCTTTGAAGCCATTCAGTACTACCTGCTGCAAGCCTCAAACGAGCTGGCGCGCGAACA 620 Query 10318 GGGTATGTGTTC-TGGATT--CGAAGACACTAAGTATGCCAAAGGTGTTATGCCAGTTGA 10374 |||| || | ||| || | ||| ||| |||||| || || |||| |||| Sbjct 619 GGGTGCCTGCCCGTGGTTTGACCAAGCCACC---TATGCCCGTGGAGTGCTGCCTATTGA 563 Query 10375 TCGTTATAAGTCTGATGTCGACAACACCCACACAGCAGAACTACAGATGAATTGGAATTG 10434 || || ||| | ||| || || || |||| | || ||| |||| Sbjct 562 CACCTACAAACGCGATCTGGACGGCATTTGCA--GC-GAACC---GTTGCATTACGATTG 509 Query 10435 GT------TGCGTAATGAGATTGTCCATA---ATGGCCTACGTAACTCTACTCTATCTGC 10485 | |||| || | | || | | | || || |||||||| || || ||||| Sbjct 508 GGAAGCACTGCGC---GACAGTATCAAAACACACGGTCTGCGTAACTCCACGCTCTCTGC 452 Query 10486 ATTCATGCCTTCGGAAACATCTTCTCAGGTATCTAACGCAACAAACGGCATCGAACCACC 10545 || ||||| |||||||| || || || | || ||||| || ||||| ||||||||||| Sbjct 451 GTTGATGCCGTCGGAAACCTCGTCACAAATTTCCAACGCCACCAACGGTATCGAACCACC 392 Query 10546 TCGTGGCTACATGTCAGTT--AAGCAGTCGAAGGATGGCATCTTAAAACAAATCGTACCG 10603 || || |||| |||| ||| ||| || || ||||| || || | || ||| Sbjct 391 ACGCGGTCACAT--CAGTATCAAGGCGTCAAAAGACGGCATTTTGCGCCAGGTGGTGCCG 334 Query 10604 GGTTATGATAAATACAAAGACCAATACGAGTTACTATGGAATATCAAAGACAACACTGGT 10663 | ||| | | || || ||||| ||||| ||| | || |||| || Sbjct 333 GATTACAAAACCCTGAAGGATGCCTACGAATTACTGTGGGAAATGCCGAACAATGACGGC 274 Query 10664 TACTTGGAATTGGTTGCCATCATGCAGAAGTTTGTGGATCAGGCTATTTCAGCAAACACT 10723 ||| || || |||||| | |||||||||||||| |||||||||||||| || ||||| Sbjct 273 TACCTGCAACTGGTTGGGCTGATGCAGAAGTTTGTCGATCAGGCTATTTCTGCCAACACC 214 Query 10724 AACTACGACCCAGAAAACTACCCAGAAAGTAAGGTTCCAATCAAAAAGTTATTGCAAGAT 10783 |||||||| || | || ||| | | || || || || ||| |||| || || Sbjct 213 AACTACGATCCGGCGCGCTTCCCGTCAGGAAAAGTGCCGATGAAACAGTTGCTGACTGAC 154 Query 10784 TTGGTGACATGTTATAGACTCGGCATCAAGACACTGTACTACCACAACACACGAGATGGT 10843 ||| | || |||| |||| | || || ||||| || || ||||| || || ||| Sbjct 153 TTGCTTACCGCCTATAAGTTCGGGTTGAAAACGCTGTATTATCAAAACACCCGTGACGGT 94 Query 10844 GCTAGTGATGAACAGAAAGA 10863 || || | |||| |||| Sbjct 93 GCAGAAGACGCACAGGAAGA 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342903675654203