Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq1209 100 8e-17 >seq1209 Length=44547 Score = 100 bits (110), Expect = 8e-17 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34755 TGATGGCGTAGAGTTCGCCGTCAATAACTCGCTTATTACCAGTATCAACAGCTACAGTTG 34814 |||||||||||| | ||| ||||||| ||||||| || | || || || || | Sbjct 6744 TGATGGCGTAGATCTTGCCATCAATAATACGCTTATCGTTGGTGTTGACGGCGACGGTGG 6685 Query 34815 CACCATCAGGAATGACTGGCTCCATACTGTCTCCTGATGCAGGAAAACACAGGACACCAG 34874 ||||| ||||| | ||| ||||| ||||| || || || ||||| || || || | Sbjct 6684 TGCCATCGGGAATAAATGGTTCCATGCTGTCGCCCTTGGCCGGGAAACAGAGTACGCCGG 6625 Query 34875 AACCATCACTATTGGCTCCAACTCGACGGAGCGTTGCTTTTGAAAAGCGCAATTTAAAAC 34934 | ||||| ||| || || || || || | || | ||| ||||| ||||| ||||| | Sbjct 6624 AGCCATCGGAATTCGCACCGACGCGGCGTAAGGTCGATTTGGAAAACCGCAACTTAAACC 6565 Query 34935 CGTTGTGATCCTCAT 34949 |||| ||||| |||| Sbjct 6564 CGTTATGATCTTCAT 6550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147529422942528