Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq57 190 4e-43 seq504 122 2e-22 seq252 100 5e-16 >seq57 Length=2082711 Score = 190 bits (210), Expect = 4e-43 Identities = 182/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | |||||| |||| |||||| || | ||| || ||||| || ||| Sbjct 1621118 ATTCCACCTCTGAGTCGAAGAACCAAATGCAACGTGGACTCCTTCTGTATATTGTAATCG 1621177 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| || | | ||| || || || ||||| ||||||||||||| || ||||||||| Sbjct 1621178 GATAGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGA 1621237 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| |||||||| ||||| | |||| ||| ||||||||| |||| |||| Sbjct 1621238 GGGATTCCTTCCTTATCTTGAATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCA 1621297 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 ||||| |||||||| || || || || | ||||||||| || || |||||||| Sbjct 1621298 ACTTCAAGAGTTATTGTCTTCCCCGTCAACGTTTTTACGAAGATCTGCATTTT 1621350 Score = 168 bits (186), Expect = 1e-36 Identities = 180/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || ||||||| || ||||| ||||| | |||| ||||| |||||| Sbjct 1620655 AATTTGCATTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATT 1620714 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || | ||| ||||| || |||||||| || |||||||| ||||| Sbjct 1620715 ATAATCTGAAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTG 1620774 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || |||||||||||||| || ||||| | |||| || || ||||| || Sbjct 1620775 GTCGGGTGGAATTCCTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCTGA 1620834 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | ||||||||| ||||| |||||||| || || || ||||||||||| ||||||||| Sbjct 1620835 CGGCTCAACTTCAAGAGTAATAGTTTTTCCAGTCAGGGTTTTTACAAAAATTTGCATT 1620892 Score = 165 bits (182), Expect = 1e-35 Identities = 178/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||| | || ||| || ||||||||||| | |||||| ||| ||| Sbjct 1618832 ATTTGCATACCTCCTCGAAGTCTAAGGACAAGATGCAATGTTGACTCTTTCTGAATGTTA 1618891 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | |||| | ||| || || ||||| || || ||||| || || || ||| Sbjct 1618892 TAATCAGAAAGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGA 1618951 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| |||||||| |||||||| || || | ||||| |||| ||| ||||| ||| Sbjct 1618952 TCGGGAGGGATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTTTCAATTGTATCAGAA 1619011 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 | || ||||||| || || ||||| ||||||| ||||| || ||||| ||||| Sbjct 1619012 GGTTCTACTTCTAAGGTAATCGTTTTTCCTGTTAAAGTTTTCACGAATATCTGCAT 1619067 Score = 159 bits (176), Expect = 6e-34 Identities = 178/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193123 TAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATAT 193182 ||||||| | || || | ||||| ||||| ||||| || || | || || ||||| Sbjct 1618602 TAATTTAGTTTCCGCCACGCAATCTCAGTACTAGATGTAAAGTTGATTCCTTCTGAATAT 1618661 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 |||| || || || || | | ||| || |||||||| || || ||||| || || || | Sbjct 1618662 TATAATCTGACAAGGTGCGACCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTTTGCT 1618721 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 | ||||| ||||||||||| || ||||| ||||| | ||| | |||| |||||| || | Sbjct 1618722 GGTCAGGTGGTATTCCTTCCTTGTCTTGAATTTTCGCTTTCACATTTTCAATAGTGTCAG 1618781 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 | | |||||||| ||||| || ||||| || || | ||||| |||||||||||||| Sbjct 1618782 ATGGTTCAACTTCAAGAGTAATGGTTTTTCCAGTCAAAGTTTTCACAAATATTTGCAT 1618839 Score = 159 bits (176), Expect = 6e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | ||||| || | ||| | || | ||| || |||||| || || Sbjct 1620434 ATACCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCA 1620493 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| |||| ||| || || || ||||| |||||||| | | ||| ||||| || Sbjct 1620494 GATAGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGT 1620553 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| ||||| || ||||||| ||||| |||| ||||||||| || | ||| Sbjct 1620554 GGGATTCCTTCCTTATCCTGGATTTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCC 1620613 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 ||||| ||||| || ||||| || || || ||||| ||||| ||||||||| Sbjct 1620614 ACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1620664 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | ||||| || | ||| | || | ||| || |||||| || || Sbjct 1619066 ATACCACCTCTAAGACGAAGAACTAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCA 1619125 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| |||| ||| || || || ||||| |||||||| | | ||| ||||| || Sbjct 1619126 GATAGAGTTCGGCCATCTTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGT 1619185 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| ||||| || ||||||| ||| | |||| ||||||||| || | |||| Sbjct 1619186 GGGATTCCTTCCTTATCCTGGATTTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCA 1619245 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 ||||| ||||| || ||||| || || || ||||| || || ||||||||| Sbjct 1619246 ACTTCAAGAGTAATTGTTTTTCCAGTCAGAGTTTTCACGAAAATTTGCATT 1619296 Score = 150 bits (166), Expect = 3e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| ||||| | ||||| |||| ||| | || | ||| || |||||| || || Sbjct 1619522 ATACCCCCTCTGAGCCGAAGAACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAATCA 1619581 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 |||| |||| ||| ||||| || ||||| |||||||| | | ||| ||||| || Sbjct 1619582 GATAGAGTTCGGCCATCTTCTAACTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGT 1619641 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||||||||| || ||||| | |||| || || ||||| || | |||| Sbjct 1619642 GGAATTCCTTCTTTATCCTGGATTTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCA 1619701 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 ||||| ||||| |||||||| || || || ||||| ||||| ||||||||| Sbjct 1619702 ACTTCAAGAGTAATAGTTTTTCCAGTCAGAGTTTTCACAAAAATTTGCATT 1619752 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | ||||| |||| |||||| || | |||||| ||||| || || Sbjct 1620206 ATTCCACCTCTGAGACGAAGAACCAAATGCAACGTGGACTCTTTCTGTATATTGTAATCA 1620265 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| || || || || || ||||| || || ||||||||||| || Sbjct 1620266 GACAGTGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGT 1620325 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||||||||| ||||| | ||| | |||| ||| ||||| || | || Sbjct 1620326 GGAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCT 1620385 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 ||||||| || || ||||| || |||| |||||| || ||||| ||||| Sbjct 1620386 ACTTCTAAGGTGATGGTTTTTCCGGTTAACGTTTTGACGAATATCTGCAT 1620435 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || ||||| | || ||||| ||||| | |||| ||||| |||||| Sbjct 1620883 AATTTGCATTCCTCCTCTTAGTCTGAGTACAAGATGTAGAGTAGATTCTTTCTGAATATT 1620942 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || | ||| ||||| || |||||||| || |||||||| ||||| Sbjct 1620943 ATAATCTGAAAGAGTGCGGCCATCTTCTAACTGCTTTCCGGCGAAGATTAATCTTTGTTG 1621002 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || ||||||||||||||||| ||||| | || | |||| || || || || Sbjct 1621003 GTCTGGCGGAATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATTGTGTCAGA 1621062 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 || |||||||| || || || ||||| ||||| || || || || || || |||||| Sbjct 1621063 AGGTTCAACTTCAAGTGTAATCGTTTTTCCTGTAAGGGTCTTGACGAAGATCTGCATT 1621120 Score = 134 bits (148), Expect = 2e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || ||||||| || ||||| ||||| | || | ||||| ||||| Sbjct 1619287 AATTTGCATTCCTCCTCTCAGTCTGAGTACAAGATGTAGAGTTGATTCTTTCTGGATATT 1619346 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | || | ||| |||| || |||||||| || ||||| || ||||| Sbjct 1619347 ATAATCTGAGAGAGTGCGGCCATCTTCTAGCTGCTTTCCGGCGAAGATTAACCTTTGTTG 1619406 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || ||||||||||||||||| ||||||| || | |||| ||||| || || Sbjct 1619407 GTCTGGTGGAATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCGATAGTGTCAGA 1619466 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat 193360 | |||||||| || || || || || ||||| || || || ||||| || ||||| Sbjct 1619467 TGGTTCAACTTCAAGTGTAATGGTCTTTCCTGTAAGAGTCTTCACAAAGATCTGCAT 1619523 Score = 132 bits (146), Expect = 9e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || ||||| | | ||||| ||||| || |||| ||||| ||||| Sbjct 1619743 AATTTGCATTCCTCCTCTAAGCCTTAGTACAAGATGTAAAGTAGATTCTTTCTGGATATT 1619802 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | | ||| || || || || || ||||| || ||||||||||| Sbjct 1619803 GTAGTCAGACAGAGTGCGACCATCTTCCAACTGCTTGCCTGCAAAGATCAATCTCTGTTG 1619862 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || |||||||||||||| ||||| | ||| | |||| || || || || Sbjct 1619863 ATCTGGTGGAATACCTTCTTTATCTTGAATTTTAGCTTTCACATTTTCTATCGTGTCAGA 1619922 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 | || ||||||| || || || || || |||| || || |||||||| |||||| Sbjct 1619923 CGGTTCCACTTCTAAGGTAATGGTCTTTCCAGTTAAGGTCTTAACAAATATCTGCATT 1619980 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||||| || | || ||||| | || | ||||| |||||| || || Sbjct 1619978 ATTCCTCCTCTCAGTCTTAAGACAAGATGAAGAGTTGATTCTTTCTGAATATTGTAATCA 1620037 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| ||||| ||||| || || ||||| || || || || ||||| Sbjct 1620038 GAAAGGGTGCGCCCATCTTCTAACTGTTTCCCAGCGAAAATCAACCTTTGCTGGTCAGGT 1620097 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 ||||||||||| |||||||| || || | ||||| |||| ||| || || |||| || Sbjct 1620098 GGTATTCCTTCCTTATCTTGAATCTTCGCTTTTACATTTTCAATTGTGTCAGAAGGTTCT 1620157 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 ||||| ||||| ||||| || ||||| || || || || || || |||||| Sbjct 1620158 ACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTCTTAACGAAGATCTGCATT 1620208 >seq504 Length=327254 Score = 122 bits (134), Expect = 2e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| || ||||| | || | ||| |||| ||||| || |||||||| ||||| Sbjct 214112 ATATTGTAATCGGAAAGGGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAATCAATCTT 214171 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || ||||| ||||| ||||||||||||||||| || || | || | |||| ||| || Sbjct 214172 TGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTTTCAATTGTG 214231 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgc 193358 || || | ||||| || || || || |||||||| || | ||||| ||||| |||||| Sbjct 214232 TCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACAAAAATTTGC 214291 Query 193359 atttt 193363 || || Sbjct 214292 ATATT 214296 >seq252 Length=802098 Score = 100 bits (110), Expect = 5e-16 Identities = 127/171 (74%), Gaps = 4/171 (2%) Strand=Plus/Minus Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || ||||||||||| || || || | ||||| |||| ||||||||| || || || || Sbjct 443713 ATACCTTCTTTATCCTGAATCTTAGCTTTTACATTTTCAATAGTATCCGAGGATTCTACC 443654 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttattagtaaaa 193373 || || || || |||||||| || || ||||||||||| || |||| ||| | || | | Sbjct 443653 TCAAGGGTAATTGTTTTACCCGTGAGGGTTTTTACAAAAATCTGCA-TTTCTGAGCAGAT 443595 Query 193374 taattattttaaataatatatacttta-tattttaacattatattataCAA 193423 | ||||| |||| || ||| | || | || ||| ||| ||||||||| Sbjct 443594 TTTTTATTCTAAAAAAAATAAAGTTAACTAAATTA--GTTAAATTATACAA 443546 Score = 89.7 bits (98), Expect = 9e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||| ||||| | || || |||| || || |||| ||||| || ||||| || || Sbjct 443917 ACCTCCTCTTAGTCTGAGCACCAAGTGTAAAGTAGATTCTTTTTGTATGTTATAATCAGA 443858 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| ||| || || || || |||||||||||||||||||| ||||||||||| Sbjct 443857 AAGAGTTCTGTTATCTTCCAACTGCTTACCGGCAAAAATTAATCTCTGCTGATCAGGAGG 443798 Query 193253 TATTCCT 193259 ||||||| Sbjct 443797 TATTCCT 443791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899468430189840