Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq3289 127 7e-25 >seq3289 Length=8908 Score = 127 bits (140), Expect = 7e-25 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 40250 GAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGAT 40309 |||||||| ||||| || ||||| ||||| || || ||||| ||||| |||||||| | Sbjct 6216 GAAGTCGACGTCGAAGTCAGGCATCGACACACGTTCCGGGTTGAGGAAACGCTCGAACAG 6157 Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369 || | || ||||| ||||| |||||||| || |||||| |||||||| || Sbjct 6156 CAGGTCAAATTCAAGCGGATCGAGATCGGTGATTTTCAGTGAGTAGGCCACCAGCGAGCC 6097 Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429 || | || || ||||| || || ||| ||| |||| || || | ||| |||| || Sbjct 6096 TGCACCCGAACCGCGCCCCGGACCTACCGGGACATCGTTGTCTTTTGACCACTGGATAAA 6037 Query 40430 GTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGAT 40474 ||| |||| |||||||| ||||||||||||||| |||| Sbjct 6036 CTCCATCACGATCAGGAAGTAGCCAGGGAACCCCATCTGGTTGAT 5992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163292726786166