Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq3075 129 1e-25 seq4705 86.0 1e-12 >seq3075 Length=4169 Score = 129 bits (142), Expect = 1e-25 Identities = 128/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 21518 TGGATTCAGAGCGACGGCATTTTGCAGATAGTCAGGCGCAAGGTGCGCATAGGCCATCGT 21577 |||||| || || |||| | ||||||||| ||||||| ||| || ||| ||||||| Sbjct 1196 TGGATTTAGTTTTACTGCATCGTTCAGATAGTCCGGCGCAAAGTGTGCGTAGACCATCGT 1137 Query 21578 CTGCTGAATGCTCGCATGTCCCAGAATCTGTTGCAGTGCGATTATATTGCCCCCATTCAT 21637 || |||| | | ||| || || || | |||||||| || ||||||||||| || || Sbjct 1136 TTGTAAAATGGTGGAATGCCCAAGGATTTTTTGCAGTGAAATGATATTGCCCCCGTTGAT 1077 Query 21638 CATGAAATGGCTTGCGAATGTATGCCGCAGGATGTGGGTTGCCTGA 21683 ||| |||||||| ||||| || ||||||| || |||||| |||||| Sbjct 1076 CATAAAATGGCTGGCGAACGTGTGCCGCATGACGTGGGTAGCCTGA 1031 >seq4705 Length=4822 Score = 86.0 bits (94), Expect = 1e-12 Identities = 227/341 (67%), Gaps = 12/341 (4%) Strand=Plus/Minus Query 21510 CCTTTTAGTGGATTCAGAGCGACGGCATTTTGCAGATAGTCAGGCGCAAGGTGCGCATAG 21569 || || |||||||| | | | |||| || | ||| ||||| ||||| || || ||| Sbjct 1305 CCCTTCAGTGGATTAAAGGTTATCGCATCCTGTAAATAATCAGGAGCAAGATGTGCGTAG 1246 Query 21570 GCCATCGTCTGCTGAATGCTCGCATGTCCCAGAATCTGTTGCAGTGCGATTATATTGCCC 21629 | ||| || ||||| || || || |||| ||| | |||||| | | ||||| || Sbjct 1245 GTCATAGTTTGCTGGATTGAAGCGTGGCCCATAATTTTTTGCAGCGTCAGAATATTTCCT 1186 Query 21630 CCATTCATCATGAAATGGCTTGCGAATGTATGCCGCAGGATGTGGGTTGCCTGATTGGGT 21689 || ||||| |||||||| || || ||||| ||||| | || || ||| Sbjct 1185 CCGTTCATAATGAAATGTGCAGCAAAGGTATGACGCAGCACATGCACTGACTGTCCTTTA 1126 Query 21690 GGTATATCAGGTTTCACTCTGCGTAAAATCCCGCAAAATTTCTCATAATCAACTTTGAAT 21749 |||| ||| || || || ||||||||||| | |||| ||||||| || | || Sbjct 1125 GGTAGATCGGGCTTTACACTGCGTAAAATTTTTCGGTATTTTCCATAATCTACATAAAAG 1066 Query 21750 AATTT---GGCGCTGGCCTCCTCTTTA--ACTTTTTTCTCCAGTTCCTCAGAAATCGGCA 21804 | ||| | ||| | |||||| ||||| || || |||||||| || | Sbjct 1065 AGTTTTCCTGAGCT--TTTTGTCTTTATTGCTTTTACTGCCTGT---TCAGAAATGGGGA 1011 Query 21805 CGGTTCGCTTTTTACCGTTTTTGGTTTTCAG-GAAGGTAAC 21844 |||| || | || || ||||||| |||||| ||| ||||| Sbjct 1010 CGGTGCGAATCTTGCCATTTTTGG-TTTCAGTGAAAGTAAC 971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95034133828176