Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_021774.1
Length=29742
Score E
Sequences producing significant alignments: (Bits) Value
seq3075 129 1e-25
seq4705 86.0 1e-12
>seq3075
Length=4169
Score = 129 bits (142), Expect = 1e-25
Identities = 128/166 (77%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 21518 TGGATTCAGAGCGACGGCATTTTGCAGATAGTCAGGCGCAAGGTGCGCATAGGCCATCGT 21577
|||||| || || |||| | ||||||||| ||||||| ||| || ||| |||||||
Sbjct 1196 TGGATTTAGTTTTACTGCATCGTTCAGATAGTCCGGCGCAAAGTGTGCGTAGACCATCGT 1137
Query 21578 CTGCTGAATGCTCGCATGTCCCAGAATCTGTTGCAGTGCGATTATATTGCCCCCATTCAT 21637
|| |||| | | ||| || || || | |||||||| || ||||||||||| || ||
Sbjct 1136 TTGTAAAATGGTGGAATGCCCAAGGATTTTTTGCAGTGAAATGATATTGCCCCCGTTGAT 1077
Query 21638 CATGAAATGGCTTGCGAATGTATGCCGCAGGATGTGGGTTGCCTGA 21683
||| |||||||| ||||| || ||||||| || |||||| ||||||
Sbjct 1076 CATAAAATGGCTGGCGAACGTGTGCCGCATGACGTGGGTAGCCTGA 1031
>seq4705
Length=4822
Score = 86.0 bits (94), Expect = 1e-12
Identities = 227/341 (67%), Gaps = 12/341 (4%)
Strand=Plus/Minus
Query 21510 CCTTTTAGTGGATTCAGAGCGACGGCATTTTGCAGATAGTCAGGCGCAAGGTGCGCATAG 21569
|| || |||||||| | | | |||| || | ||| ||||| ||||| || || |||
Sbjct 1305 CCCTTCAGTGGATTAAAGGTTATCGCATCCTGTAAATAATCAGGAGCAAGATGTGCGTAG 1246
Query 21570 GCCATCGTCTGCTGAATGCTCGCATGTCCCAGAATCTGTTGCAGTGCGATTATATTGCCC 21629
| ||| || ||||| || || || |||| ||| | |||||| | | ||||| ||
Sbjct 1245 GTCATAGTTTGCTGGATTGAAGCGTGGCCCATAATTTTTTGCAGCGTCAGAATATTTCCT 1186
Query 21630 CCATTCATCATGAAATGGCTTGCGAATGTATGCCGCAGGATGTGGGTTGCCTGATTGGGT 21689
|| ||||| |||||||| || || ||||| ||||| | || || |||
Sbjct 1185 CCGTTCATAATGAAATGTGCAGCAAAGGTATGACGCAGCACATGCACTGACTGTCCTTTA 1126
Query 21690 GGTATATCAGGTTTCACTCTGCGTAAAATCCCGCAAAATTTCTCATAATCAACTTTGAAT 21749
|||| ||| || || || ||||||||||| | |||| ||||||| || | ||
Sbjct 1125 GGTAGATCGGGCTTTACACTGCGTAAAATTTTTCGGTATTTTCCATAATCTACATAAAAG 1066
Query 21750 AATTT---GGCGCTGGCCTCCTCTTTA--ACTTTTTTCTCCAGTTCCTCAGAAATCGGCA 21804
| ||| | ||| | |||||| ||||| || || |||||||| || |
Sbjct 1065 AGTTTTCCTGAGCT--TTTTGTCTTTATTGCTTTTACTGCCTGT---TCAGAAATGGGGA 1011
Query 21805 CGGTTCGCTTTTTACCGTTTTTGGTTTTCAG-GAAGGTAAC 21844
|||| || | || || ||||||| |||||| ||| |||||
Sbjct 1010 CGGTGCGAATCTTGCCATTTTTGG-TTTCAGTGAAAGTAAC 971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 95034133828176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |