Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_021775.1 Length=42215 Score E Sequences producing significant alignments: (Bits) Value seq1577 96.9 9e-16 >seq1577 Length=31499 Score = 96.9 bits (106), Expect = 9e-16 Identities = 193/286 (67%), Gaps = 0/286 (0%) Strand=Plus/Plus Query 1270 GAACCAGCGGTCAGTAAACGCCTGGTAACTGCTGCCGAGGCGTTGGCCCGCATCCAGGAA 1329 ||||||||| ||||| || ||| ||| || ||||| |||||| ||| | || Sbjct 18213 GAACCAGCGCGAGGTAAATGCGCCGTATGTGCGCCCCAGGCGCTGGCCCTGATCGACAAA 18272 Query 1330 CCAGCACTGGCCCCACAGGTCTTTCAGGCCATTAGGCGCTGGCGTACCGGTCAGATTAAT 1389 ||| || |||||||||||| ||| || || || |||||||| ||||| ||||| Sbjct 18273 CCACGCTTGCCCCCACAGGTCTACCAGACCGTTTGGTGCTGGCGTGCCGGTGAGATTGCC 18332 Query 1390 GAAGCGCTTAATCTTCTTGTGCGCCACCTTGCCGAGCGCCCGTGCGCGTTTACTACCGCC 1449 |||| | | | || || || |||||||| || || || ||||| | ||||| Sbjct 18333 CCAGCGGTGGACATGATTATGTGCGACCTTGCCAAGTGCTGCCGCACGTTTGCCGCCGCC 18392 Query 1450 ACGACTACGGAACGACTTCAGCTTGGTGGATTCATCGGCAACAATGACCGTGAACGGCCA 1509 || || || || || ||| |||| | ||| ||| | | | ||||||||| Sbjct 18393 GCGCAATCGAAAGGATTTAAGCCGGGTGCTCTTGTCGCCAATTACGCTGGCGAACGGCCA 18452 Query 1510 GCGGTCACCCCAGAATTCGACGAGCCACTCCAGGATGTCGTAGTTG 1555 ||| |||||| ||| || ||||| ||||| |||| |||||| Sbjct 18453 GCGCTCACCCAGCGTTTCAACCAGCCATACCAGGTTGTCATAGTTG 18498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134939895720138