Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_021775.1
Length=42215
Score E
Sequences producing significant alignments: (Bits) Value
seq1577 96.9 9e-16
>seq1577
Length=31499
Score = 96.9 bits (106), Expect = 9e-16
Identities = 193/286 (67%), Gaps = 0/286 (0%)
Strand=Plus/Plus
Query 1270 GAACCAGCGGTCAGTAAACGCCTGGTAACTGCTGCCGAGGCGTTGGCCCGCATCCAGGAA 1329
||||||||| ||||| || ||| ||| || ||||| |||||| ||| | ||
Sbjct 18213 GAACCAGCGCGAGGTAAATGCGCCGTATGTGCGCCCCAGGCGCTGGCCCTGATCGACAAA 18272
Query 1330 CCAGCACTGGCCCCACAGGTCTTTCAGGCCATTAGGCGCTGGCGTACCGGTCAGATTAAT 1389
||| || |||||||||||| ||| || || || |||||||| ||||| |||||
Sbjct 18273 CCACGCTTGCCCCCACAGGTCTACCAGACCGTTTGGTGCTGGCGTGCCGGTGAGATTGCC 18332
Query 1390 GAAGCGCTTAATCTTCTTGTGCGCCACCTTGCCGAGCGCCCGTGCGCGTTTACTACCGCC 1449
|||| | | | || || || |||||||| || || || ||||| | |||||
Sbjct 18333 CCAGCGGTGGACATGATTATGTGCGACCTTGCCAAGTGCTGCCGCACGTTTGCCGCCGCC 18392
Query 1450 ACGACTACGGAACGACTTCAGCTTGGTGGATTCATCGGCAACAATGACCGTGAACGGCCA 1509
|| || || || || ||| |||| | ||| ||| | | | |||||||||
Sbjct 18393 GCGCAATCGAAAGGATTTAAGCCGGGTGCTCTTGTCGCCAATTACGCTGGCGAACGGCCA 18452
Query 1510 GCGGTCACCCCAGAATTCGACGAGCCACTCCAGGATGTCGTAGTTG 1555
||| |||||| ||| || ||||| ||||| |||| ||||||
Sbjct 18453 GCGCTCACCCAGCGTTTCAACCAGCCATACCAGGTTGTCATAGTTG 18498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134939895720138
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |