Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq57 140 3e-28 seq504 125 6e-24 seq126 114 1e-20 seq33 105 6e-18 seq252 89.7 5e-13 >seq57 Length=2082711 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || || |||||||| || ||||||||| | | Sbjct 1620207 ATGCAGATCTTCGTTAAGACTCTTACAGGAAAGACTATTACTCTTGAAGTAGAACCTTCT 1620148 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| |||||| ||||| ||||| || ||||||||||| || || || Sbjct 1620147 GACACAATTGAAAATGTAAAAGCGAAGATTCAAGATAAGGAAGGAATACCACCTGACCAG 1620088 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| || || ||||||||| | || ||| | | | | | || ||||| || Sbjct 1620087 CAAAGGTTGATTTTCGCTGGGAAACAGTTAGAAGATGGGCGCACCCTTTCTGATTACAAT 1620028 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || || | || || || || | ||||| Sbjct 1620027 ATTCAGAAAGAATCAACTCTTCATCTTGTCTTAAGACTGAGAGGAGG 1619981 Score = 138 bits (152), Expect = 1e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| |||| || ||||| ||||| | ||||||||| | | Sbjct 1619067 ATGCAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCT 1619008 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| |||||| ||||| ||||| || |||||||| ||||||||||| Sbjct 1619007 GATACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAG 1618948 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| || || ||||||||| |||| ||| ||| | || ||||||||| Sbjct 1618947 CAAAGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAAC 1618888 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||| || || || ||| | || |||| Sbjct 1618887 ATTCAGAAAGAGTCAACATTGCATCTTG 1618860 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| | || || ||||| ||||| || ||||| ||| | | Sbjct 1618839 ATGCAAATATTTGTGAAAACTTTGACTGGAAAAACCATTACTCTTGAAGTTGAACCATCT 1618780 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| || || |||||||| ||||||||||| || || || Sbjct 1618779 GACACTATTGAAAATGTGAAAGCGAAAATTCAAGACAAGGAAGGAATACCACCTGACCAG 1618720 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| || || |||||||| |||| ||| | | | ||||||||||||| Sbjct 1618719 CAAAGGTTGATTTTCGCAGGGAAACAATTGGAAGATGGTCGCACCTTGTCAGATTATAAT 1618660 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || |||| | || || ||||||| || || Sbjct 1618659 ATTCAGAAGGAATCAACTTTACATCTAGTACTGAGATTGCGTGGCGG 1618613 Score = 123 bits (136), Expect = 2e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||||||||| || ||||| || | | Sbjct 1620891 ATGCAAATTTTTGTAAAAACCCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCA 1620832 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | ||||| || ||||| || ||||||||||| || ||||| ||| Sbjct 1620831 GATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCCGACCAA 1620772 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || ||||| ||||| || ||| | || ||| | | | ||||||||||| Sbjct 1620771 CAAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAAT 1620712 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||| || ||||| || ||||| |||| Sbjct 1620711 ATTCAGAAAGAATCTACTCTACATCTTG 1620684 Score = 120 bits (132), Expect = 3e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| ||||| || ||||| ||| | | Sbjct 1621119 ATGCAGATCTTCGTCAAGACCCTTACAGGAAAAACGATTACACTTGAAGTTGAACCTTCT 1621060 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || || || ||||| ||||||||||| || || || ||| Sbjct 1621059 GACACAATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCGCCAGACCAA 1621000 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || ||||| ||||| || ||| | || ||| | | | ||||||||||| Sbjct 1620999 CAAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAAT 1620940 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||| || ||||| || ||||| |||| Sbjct 1620939 ATTCAGAAAGAATCTACTCTACATCTTG 1620912 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||||||||| || ||||| || | | Sbjct 1619751 ATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCT 1619692 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||| | ||||| || ||||| || ||||||||||| || || ||||| Sbjct 1619691 GATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCAGATCAG 1619632 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || ||||| || || ||| | || ||| ||| | || ||||| || Sbjct 1619631 CAGCGTCTTATTTTTGCTGGAAAGCAGTTAGAAGATGGCCGAACTCTATCTGATTACAAT 1619572 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||| || || || || ||||| Sbjct 1619571 ATTCAAAAGGAGTCCACCCTTCATTTGGT 1619543 Score = 114 bits (126), Expect = 1e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || ||||| || ||||| ||| | | Sbjct 1619523 ATGCAGATCTTTGTGAAGACTCTTACAGGAAAGACCATTACACTTGAAGTTGAACCATCT 1619464 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || || || ||||| ||||||||||| || || || ||| Sbjct 1619463 GACACTATCGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCAA 1619404 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || ||||| ||||| || ||||| || ||| | | | ||||||||||| Sbjct 1619403 CAAAGGTTAATCTTCGCCGGAAAGCAGCTAGAAGATGGCCGCACTCTCTCAGATTATAAT 1619344 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || || ||||| || ||||| |||| Sbjct 1619343 ATCCAGAAAGAATCAACTCTACATCTTG 1619316 Score = 114 bits (126), Expect = 1e-20 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | |||||| ||||||| ||||| || || | ||||||||| | | Sbjct 1620435 ATGCAGATATTCGTCAAAACGTTAACCGGAAAAACCATCACCTTAGAAGTAGAACCATCT 1620376 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| || || ||||| |||||||| || || || |||||| Sbjct 1620375 GATACAATTGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 1620316 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | ||||||||||| || || ||| |||| ||| ||| | || |||| ||||| | Sbjct 1620315 CAGAGGTTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCG-CACAC-TGTCTGATTACA 1620258 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 | || || || || || || | || ||||| Sbjct 1620257 ATATACAGAAAGAGTCCACGTTGCATTTGGT 1620227 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||| ||||| || ||||| || || | Sbjct 1620663 ATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTCT 1620604 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| |||||| || ||||| || || |||||||| || || ||||| Sbjct 1620603 GATACTATTGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAG 1620544 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || ||||| || || ||| |||| ||| ||| | || ||||| || Sbjct 1620543 CAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAAT 1620484 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||| || || || || || || Sbjct 1620483 ATTCAAAAGGAGTCCACCCTTCATTTAGT 1620455 Score = 105 bits (116), Expect = 6e-18 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| |||| || |||| || || || ||||| | ||||| ||| | | Sbjct 1619979 ATGCAGATATTTGTTAAGACCTTAACTGGAAAGACCATTACCTTAGAAGTGGAACCGTCT 1619920 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||||| || ||| || || ||||| |||||||| || || || |||||| Sbjct 1619919 GACACGATAGAAAATGTGAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 1619860 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || || ||| |||| ||| | | |||| || || || Sbjct 1619859 CAGAGATTGATCTTTGCAGGCAAGCAGTTGGAAGATGGTCGCACTCTGTCTGACTACAAT 1619800 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || || ||||| || |||| |||| Sbjct 1619799 ATCCAGAAAGAATCTACTTTACATCTTG 1619772 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| || || || ||||| ||||| || ||||| || || | Sbjct 1619295 ATGCAAATTTTCGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTCT 1619236 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| || ||||| || || |||||||| || || ||||| Sbjct 1619235 GATACTATTGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAG 1619176 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || ||||| || || ||| |||| ||| ||| | || ||||| || Sbjct 1619175 CAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAAT 1619116 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||| || || || || || || Sbjct 1619115 ATTCAAAAGGAGTCCACCCTTCATTTAGT 1619087 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | |||||| | || || || || || || || ||||| || | | Sbjct 1621347 ATGCAGATCTTCGTAAAAACGTTGACGGGGAAGACAATAACTCTTGAAGTTGAGCCTTCA 1621288 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| ||||| || || ||||| || |||||||| ||||| ||||| Sbjct 1621287 GATACTATTGAAAACGTAAAGGCTAAAATTCAAGATAAGGAAGGAATCCCTCCTGATCAG 1621228 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| || || ||||| || || ||| |||| ||| | | | | || ||||| || Sbjct 1621227 CAACGATTAATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGTACCCTATCCGATTACAAT 1621168 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || | || ||||| Sbjct 1621167 ATACAGAAGGAGTCCACGTTGCATTTGGT 1621139 >seq504 Length=327254 Score = 125 bits (138), Expect = 6e-24 Identities = 143/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| | || |||||||| ||||| || || || ||| || | Sbjct 214293 ATGCAAATTTTTGTGAAAACTTTGACGGGTAAAACAATTACCCTTGAGGTTGAACCCTCA 214234 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || |||||||||||| ||||||||||| ||||| ||||| Sbjct 214233 GACACAATTGAAAATGTTAAGGCAAAGATCCAAGATAAAGAAGGAATTCCTCCAGATCAG 214174 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| ||||| || |||||||| || ||| | | | | || ||||| || Sbjct 214173 CAAAGATTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACCCTTTCCGATTACAAT 214114 Query 24884 ATTCA-AAAGG 24893 || || ||||| Sbjct 214113 ATCCAGAAAGG 214103 >seq126 Length=1333976 Score = 114 bits (126), Expect = 1e-20 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 ||||| |||||||| | ||| ||||| ||||| || || || || |||||||||||||| Sbjct 1333101 TATTCAACAATTTCCGTACATAAATTGCTACATTTAATAGTTCCCAAATTTTGTTGATTT 1333160 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTG 139240 ||| || ||||| | ||||||||| | |||||||||| |||||||||||||||| Sbjct 1333161 GATTTACGATTACATGAATCTTTGTATAACATATACGGTACTCCAGTTTCCACTTGTG 1333218 >seq33 Length=2490231 Score = 105 bits (116), Expect = 6e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 126034 GCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAttttttttATA 126093 ||||| ||| ||||||||||| |||||||| ||||| ||||||||||| |||| || Sbjct 182530 GCTTTTGCTGCTGTGGAAGGCGTATTTTTCTCTGGTAGCTTTGCGGCTATATTTTGGTTA 182589 Query 126094 AAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTGACGAA 126153 |||| || || ||||||| || || || |||||||| || ||||||||| | || ||| Sbjct 182590 AAGAAAAGAGGATTAATGCCAGGGCTTACTTTCAGCAATGAATTGATTTCTAGAGATGAA 182649 Query 126154 G 126154 | Sbjct 182650 G 182650 >seq252 Length=802098 Score = 89.7 bits (98), Expect = 5e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 |||||||||||| ||||| || | || || |||||||| || ||| |||| ||| || Sbjct 443791 AGGAATACCTCCTGATCAGCAGAGATTAATTTTTGCCGGTAAGCAGTTGGAAGATAACAG 443850 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTG 24913 || | || ||||||||||| ||||| ||||| || ||||||||||| Sbjct 443851 AACTCTTTCTGATTATAACATACAAAAAGAATCTACTTTACACTTGGTG 443899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449804600542360