Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_022749.1
Length=39758
Score E
Sequences producing significant alignments: (Bits) Value
seq3708 116 9e-22
seq1653 107 5e-19
seq3409 95.1 3e-15
seq1206 95.1 3e-15
>seq3708
Length=7132
Score = 116 bits (128), Expect = 9e-22
Identities = 237/351 (68%), Gaps = 1/351 (0%)
Strand=Plus/Minus
Query 13902 GGGGAAAACATCCTTTCCTGCGATACGGAGAAGAGTATCCGGGAGCGATTTTCTGTTTAC 13961
|| ||||| || || |||| |||||||| |||||||||| || || ||||| | ||
Sbjct 2404 GGAGAAAATATTCTCACCTGTGATACGGAACAGAGTATCCGCGAACGCTTTTCGGAATAT 2345
Query 13962 CAGGTGGCGGGGCAGCGTGCCGGAAACGACGATGATTTCGGTGAGGCCACCACCACCGCG 14021
||||||||||| || || | ||| | || | |||| |||||| ||||| || ||
Sbjct 2344 CAGGTGGCGGGTCAACGCTCGGGAGATGATGCTGATCACGGTGAAGCCACGCTAACGGCA 2285
Query 14022 CTGCGGGCCCGCACAGAGGACGCATTTATTGCCCGTTACCGTCCGATGTATATCAGGCAG 14081
||||| ||| | | | ||| ||| | || || || ||| ||||| |||
Sbjct 2284 CTGCGAGCCAGAGCCAAAGACAGCCAGATTACGCGCTATCGCCCGCAACATATCCACCAG 2225
Query 14082 ACAGGGCAGGCTACGGGGGCAGGCTGTATTGCGCGTGCTGACTTTGAAGCCCGGCAACGG 14141
| || | | || || || ||||| || || ||| ||||||||| | || |
Sbjct 2224 GCCGGTAATACAACCGGAGCCAGCTGTCGCGCTCGCAGTGAATTTGAAGCCAGACAGTGT 2165
Query 14142 GCGGCGCGGACGGATGAAACCACCTATGTGGTGCAGGGCTGGCGACAGGGTAACGGTACG 14201
|| || | || || ||||| |||||| || || || | ||| || ||| |||| |
Sbjct 2164 GCAGCCAGAACCGAGGAAACGACCTATACAGTACAAGGTTAGCGGCAAGGTGACGGCAGC 2105
Query 14202 CTGTGGCAGCCCAACCAGCGGGTGATTGTCTTTGATCCGGT-CTGTGGTTT 14251
|| ||| ||| || || || || ||||| ||||||||||| ||| | |||
Sbjct 2104 CTCTGGAAGCATAATCAACGCGTCATTGTGTTTGATCCGGTGCTGGGCTTT 2054
>seq1653
Length=29478
Score = 107 bits (118), Expect = 5e-19
Identities = 125/169 (74%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 23327 GTCTATTTGCCGTGCGTGTTCGGTAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAAC 23386
||| |||| | || |||||||| | |||| |||| | ||||| || || | ||
Sbjct 556 GTCAATTTTTCTGGCATGTTCGGTTAAGTGAACCGGTGATAAATGAGCGTAACGTTGTAC 497
Query 23387 CATTTCGATAGACTCCCAGCCTCCCATTTCCTGTAAAACTGACAACGGGACTCCGGCTTG 23446
||| |||||| ||||||||| |||||||| || || | |||| || || || | ||
Sbjct 496 CATCTCGATACTCTCCCAGCCCCCCATTTCTTGCAATGCAGACAGGGGCACGCCTGACTG 437
Query 23447 AACCAGCCAACTTGCCCAGGTGTGTCTCAAGTCGTGAAATCTGAAATCA 23495
||| | ||||||||||||||| |||| || || ||||||||||| |||
Sbjct 436 AACTAACCAACTTGCCCAGGTATGTCGCAGATCATGAAATCTGAAGTCA 388
>seq3409
Length=8325
Score = 95.1 bits (104), Expect = 3e-15
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 32936 GAAGAAGAAACTACGGGAGATTCCCGTAGTATTCCTGTCATCACCATTCAGGGGCGCAAT 32995
||| | |||||||||||| | ||||||| | | | |||| ||| ||||||| ||
Sbjct 4380 GAAAATGAAACTACGGGAAAACTCCGTAGTTTAGCCTTTTTCACTATTGAGGGGCGAAAC 4439
Query 32996 GGTGGGACGTATGTCTGTAAAGAGCTGGTCTATGCATATGCAATGTGGATCAGCCCGGCA 33055
|||||||| || || |||||||| | || || || ||||| |||||||| ||||| |
Sbjct 4440 GGTGGGACTTACGTGTGTAAAGAATTAGTTTACGCCTATGCTATGTGGATTAGCCCCAAA 4499
Query 33056 TTCAGCTTAAAAGTGATACGTACTTTTGATGC 33087
||| | | | || ||||| || ||||||||
Sbjct 4500 TTCCACCTTCATGTTATACGCACGTTTGATGC 4531
>seq1206
Length=31275
Score = 95.1 bits (104), Expect = 3e-15
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 32936 GAAGAAGAAACTACGGGAGATTCCCGTAGTATTCCTGTCATCACCATTCAGGGGCGCAAT 32995
||| | |||||||||||| | ||||||| | | | |||| ||| ||||||| ||
Sbjct 16906 GAAAATGAAACTACGGGAAAACTCCGTAGTTTAGCCTTTTTCACTATTGAGGGGCGAAAC 16965
Query 32996 GGTGGGACGTATGTCTGTAAAGAGCTGGTCTATGCATATGCAATGTGGATCAGCCCGGCA 33055
|||||||| || || |||||||| | || || || ||||| |||||||| ||||| |
Sbjct 16966 GGTGGGACTTACGTGTGTAAAGAATTAGTTTACGCCTATGCTATGTGGATTAGCCCCAAA 17025
Query 33056 TTCAGCTTAAAAGTGATACGTACTTTTGATGC 33087
||| | | | || ||||| || ||||||||
Sbjct 17026 TTCCACCTTCATGTTATACGCACGTTTGATGC 17057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127079039713680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |