Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq57 96.9 3e-15 >seq57 Length=2082711 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| |||||| | || || ||||| ||||| | ||| |||| | Sbjct 1620664 AATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTC 1620605 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | |||||| || || ||||| ||||| | || ||||| Sbjct 1620604 TGATACTATTGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCA 1620545 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||||| ||| || || ||| |||| || | | ||| | | || ||||| Sbjct 1620544 GCAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAA 1620485 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||||||||||| || Sbjct 1620484 TATTCAAAAGGAGTCCAC 1620467 Score = 87.8 bits (96), Expect = 1e-12 Identities = 167/246 (68%), Gaps = 4/246 (2%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || |||||||||||||| ||||| |||||| | ||| || || Sbjct 1619067 ATGCAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCT 1619008 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | |||||| |||||| ||||| ||||| | || |||||| Sbjct 1619007 GATACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAG 1618948 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || || | |||| || || |||||| |||| || | ||| | | || || ||| Sbjct 1618947 CAAAGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAAC 1618888 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAAT 107795 ||||| || ||||| || ||||| | || | ||| | ||||| || || |||| Sbjct 1618887 ATTCAGAAAGAGTCAACATTGCATCTTGTCCTTAGACTTCGAGGAGG----TATGCAAAT 1618832 Query 107796 ATTTGT 107801 |||||| Sbjct 1618831 ATTTGT 1618826 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||||||||| || |||||| | || || ||||| ||||| | ||| ||| | Sbjct 1619296 AATGCAAATTTTCGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTC 1619237 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | || ||| || || ||||| ||||| | || ||||| Sbjct 1619236 TGATACTATTGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCA 1619177 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||||| ||| || || ||| |||| || | | ||| | | || ||||| Sbjct 1619176 GCAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAA 1619117 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||||||||||| || Sbjct 1619116 TATTCAAAAGGAGTCCAC 1619099 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| |||||| | || || ||||| ||||| | ||| ||| | Sbjct 1619752 AATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTC 1619693 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | ||||| || || ||||||||||| | || ||||| Sbjct 1619692 TGATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCAGATCA 1619633 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | ||||||| ||| || || ||| | || || | | ||| | | || ||||| Sbjct 1619632 GCAGCGTCTTATTTTTGCTGGAAAGCAGTTAGAAGATGGCCGAACTCTATCTGATTACAA 1619573 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||||||||||| || Sbjct 1619572 TATTCAAAAGGAGTCCAC 1619555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398796408499993