Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq57 96.9 3e-15
>seq57
Length=2082711
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| |||||| | || || ||||| ||||| | ||| |||| |
Sbjct 1620664 AATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTC 1620605
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| | | | |||||| || || ||||| ||||| | || |||||
Sbjct 1620604 TGATACTATTGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCA 1620545
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | ||||||| ||| || || ||| |||| || | | ||| | | || |||||
Sbjct 1620544 GCAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAA 1620485
Query 107735 CATTCAAAAGGAGTCTAC 107752
|||||||||||||| ||
Sbjct 1620484 TATTCAAAAGGAGTCCAC 1620467
Score = 87.8 bits (96), Expect = 1e-12
Identities = 167/246 (68%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || || |||||||||||||| ||||| |||||| | ||| || ||
Sbjct 1619067 ATGCAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCT 1619008
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | |||||| |||||| ||||| ||||| | || ||||||
Sbjct 1619007 GATACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAG 1618948
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| || | |||| || || |||||| |||| || | ||| | | || || |||
Sbjct 1618947 CAAAGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAAC 1618888
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAAT 107795
||||| || ||||| || ||||| | || | ||| | ||||| || || ||||
Sbjct 1618887 ATTCAGAAAGAGTCAACATTGCATCTTGTCCTTAGACTTCGAGGAGG----TATGCAAAT 1618832
Query 107796 ATTTGT 107801
||||||
Sbjct 1618831 ATTTGT 1618826
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||||||||| || |||||| | || || ||||| ||||| | ||| ||| |
Sbjct 1619296 AATGCAAATTTTCGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTC 1619237
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| | | | || ||| || || ||||| ||||| | || |||||
Sbjct 1619236 TGATACTATTGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCA 1619177
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | ||||||| ||| || || ||| |||| || | | ||| | | || |||||
Sbjct 1619176 GCAGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAA 1619117
Query 107735 CATTCAAAAGGAGTCTAC 107752
|||||||||||||| ||
Sbjct 1619116 TATTCAAAAGGAGTCCAC 1619099
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| |||||| | || || ||||| ||||| | ||| ||| |
Sbjct 1619752 AATGCAAATTTTTGTGAAAACTCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTC 1619693
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | ||||| || || ||||||||||| | || |||||
Sbjct 1619692 TGATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCAGATCA 1619633
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | ||||||| ||| || || ||| | || || | | ||| | | || |||||
Sbjct 1619632 GCAGCGTCTTATTTTTGCTGGAAAGCAGTTAGAAGATGGCCGAACTCTATCTGATTACAA 1619573
Query 107735 CATTCAAAAGGAGTCTAC 107752
|||||||||||||| ||
Sbjct 1619572 TATTCAAAAGGAGTCCAC 1619555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398796408499993
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |