Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq57 149 1e-30 seq504 102 1e-16 seq252 95.1 2e-14 >seq57 Length=2082711 Score = 149 bits (164), Expect = 1e-30 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | ||||| || || |||||||| |||||| |||| || |||| | Sbjct 1618838 TGCAAATATTTGTGAAAACTTTGACTGGAAAAACCATTACTCTTGAAGTTGAACCATCTG 1618779 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| ||| ||||| ||| || ||||| || ||||| || || | Sbjct 1618778 ACACTATTGAAAATGTGAAAGCGAAAATTCAAGACAAGGAAGGAATACCACCTGACCAGC 1618719 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| | ||||| ||||| |||||||| || ||| | | || || |||||||||||| Sbjct 1618718 AAAGGTTGATTTTCGCAGGGAAACAATTGGAAGATGGTCGCACCTTGTCAGATTATAATA 1618659 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAAT 146266 | || || ||||| ||| | ||| ||||| | |||| | || || || ||||| Sbjct 1618658 TTCAGAAGGAATCAACTTTACATCTAGTACTGAGATTGCGTGGCGGAAACTAAAT 1618604 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| |||||| | ||||| |||||||||||||| ||||| | || ||||||| | | Sbjct 1619066 TGCAGATATTCGTGAAAACTTTAACAGGAAAAACGATTACCTTAGAAGTAGAACCTTCTG 1619007 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||||||| ||| || ||| ||| ||||| || || |||||||| | Sbjct 1619006 ATACAATTGAAAATGTAAAAGCTAAGATTCAAGATAAGGAAGGAATCCCTCCCGATCAGC 1618947 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| | ||||| || || ||||| || || ||| | |||| | | |||||||| | Sbjct 1618946 AAAGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGTCGAACTCTTTCTGATTATAACA 1618887 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | || ||||| || || | ||| | || | || | ||||||||| ||||||| Sbjct 1618886 TTCAGAAAGAGTCAACATTGCATCTTGTCCTTAGACTTCGAGGAGGTATGCAAATATT 1618829 Score = 132 bits (146), Expect = 8e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || ||||||| | || |||||||| |||||| |||| || || | | Sbjct 1620890 TGCAAATTTTTGTAAAAACCCTGACTGGAAAAACTATTACTCTTGAAGTTGAGCCGTCAG 1620831 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || ||||| |||||| || ||||||||| ||||||||||| |||| Sbjct 1620830 ATACAATAGAGAACGTAAAGGCTAAAATCCAGGATAAAGAAGGAATTCCACCCGACCAAC 1620771 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || || || || || || ||||| ||| | || | |||||||||||| Sbjct 1620770 AAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAATA 1620711 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| ||| | ||| | ||| | || | |||||||| Sbjct 1620710 TTCAGAAAGAATCTACTCTACATCTTGTACTCAGACTGAGAGGAGG 1620665 Score = 132 bits (146), Expect = 8e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | ||||||||||| ||||| |||| || |||| | | Sbjct 1621118 TGCAGATCTTCGTCAAGACCCTTACAGGAAAAACGATTACACTTGAAGTTGAACCTTCTG 1621059 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || |||||| ||| ||||||||| ||||| || || |||| Sbjct 1621058 ACACAATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCGCCAGACCAAC 1620999 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || || || || || || ||||| ||| | || | |||||||||||| Sbjct 1620998 AAAGATTAATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTTTCAGATTATAATA 1620939 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| ||| | ||| | ||| | || |||||||||| Sbjct 1620938 TTCAGAAAGAATCTACTCTACATCTTGTACTCAGACTAAGAGGAGG 1620893 Score = 129 bits (142), Expect = 9e-25 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | |||||||| || |||||| |||| ||||||| | | Sbjct 1620206 TGCAGATCTTCGTTAAGACTCTTACAGGAAAGACTATTACTCTTGAAGTAGAACCTTCTG 1620147 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||||||| || || ||| ||| ||||| || ||||| || || | Sbjct 1620146 ACACAATTGAAAATGTAAAAGCGAAGATTCAAGATAAGGAAGGAATACCACCTGACCAGC 1620087 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| | ||||| || || ||||| ||||| ||| | || | | ||||| |||| Sbjct 1620086 AAAGGTTGATTTTCGCTGGGAAACAGTTAGAAGATGGGCGCACCCTTTCTGATTACAATA 1620027 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| ||| | ||| | || ||| || | |||||||| Sbjct 1620026 TTCAGAAAGAATCAACTCTTCATCTTGTCTTAAGACTGAGAGGAGG 1619981 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| | || ||||||||||||||| |||| || || | | Sbjct 1619294 TGCAAATTTTCGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTTGAGCCCTCTG 1619235 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| ||||| || ||| ||||| || ||||| ||||| | Sbjct 1619234 ATACTATTGAAAATGTTAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAGC 1619175 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || |||||||| || || || || || ||| |||| || | ||||| |||| Sbjct 1619174 AGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAATA 1619115 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| || || || | |||||||| | || | ||||| |||| Sbjct 1619114 TTCAAAAGGAGTCCACCCTTCATTTAGTTCTTCGTCTTAGAGGTGGTA 1619067 Score = 127 bits (140), Expect = 3e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| | || ||||||||||||||| |||| || || | | Sbjct 1620662 TGCAAATTTTTGTGAAAACTCTGACTGGAAAAACAATTACTCTTGAAGTGGAGCCCTCTG 1620603 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||||||| ||||| || ||| ||||| || ||||| ||||| | Sbjct 1620602 ATACTATTGAAAATGTAAAAGCCAAAATCCAGGATAAGGAAGGAATCCCACCAGATCAGC 1620543 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || |||||||| || || || || || ||| |||| || | ||||| |||| Sbjct 1620542 AGCGTCTTATTTTTGCTGGAAAGCAGTTGGAAGATGGCCGAACTCTATCTGATTACAATA 1620483 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||| || || || | |||||||| | || | ||||| |||| Sbjct 1620482 TTCAAAAGGAGTCCACCCTTCATTTAGTTCTTCGTCTTAGAGGTGGTA 1620435 Score = 111 bits (122), Expect = 2e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | |||||||| || ||||| |||| || |||| | Sbjct 1619522 TGCAGATCTTTGTGAAGACTCTTACAGGAAAGACCATTACACTTGAAGTTGAACCATCTG 1619463 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || ||||| ||| ||||||||| |||||||| || |||| Sbjct 1619462 ACACTATCGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCAAC 1619403 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| | || || || || || || |||| ||| | || | |||||||||||| Sbjct 1619402 AAAGGTTAATCTTCGCCGGAAAGCAGCTAGAAGATGGCCGCACTCTCTCAGATTATAATA 1619343 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| ||| | ||| | ||| | || | |||||||| Sbjct 1619342 TCCAGAAAGAATCAACTCTACATCTTGTACTCAGACTGAGAGGAGG 1619297 >seq504 Length=327254 Score = 102 bits (112), Expect = 1e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| || || || ||||||||||| |||| || |||| | Sbjct 214292 TGCAAATTTTTGTGAAAACTTTGACGGGTAAAACAATTACCCTTGAGGTTGAACCCTCAG 214233 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || || || ||| ||||||||| ||||| || ||||| | Sbjct 214232 ACACAATTGAAAATGTTAAGGCAAAGATCCAAGATAAAGAAGGAATTCCTCCAGATCAGC 214173 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | |||||||| || ||||| |||| ||| | || | | ||||| |||| Sbjct 214172 AAAGATTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACCCTTTCCGATTACAATA 214113 Query 146212 TACAAAAAG 146220 | || |||| Sbjct 214112 TCCAGAAAG 214104 >seq252 Length=802098 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||| || || || ||||| || ||| | |||||||| ||||| || || || ||||| || Sbjct 443791 AGGAATACCTCCTGATCAGCAGAGATTAATTTTTGCCGGTAAGCAGTTGGAAGATAACAG 443850 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 ||| | | |||||||| |||||||||||||| ||| | || || || | || |||| Sbjct 443851 AACTCTTTCTGATTATAACATACAAAAAGAATCTACTTTACACTTGGTGCTCAGACTAAG 443910 Query 146252 AGGAGGT 146258 ||||||| Sbjct 443911 AGGAGGT 443917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786003889578040