Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_023555.1
Length=43017
Score E
Sequences producing significant alignments: (Bits) Value
seq1601 360 5e-95
seq10505 183 8e-42
seq2192 178 4e-40
>seq1601
Length=30922
Score = 360 bits (398), Expect = 5e-95
Identities = 391/516 (76%), Gaps = 2/516 (0%)
Strand=Plus/Plus
Query 14317 CCTTCCTGTCGCTGGTGGTTGGCGTCGGCCACCCAGTACAATCGCTGTCGGATGTGCGGC 14376
|||| | ||| | || || |||||||||||||||||| | ||| |||||| ||||||||
Sbjct 15100 CCTTTCCGTCCCGCGTAGTGGGCGTCGGCCACCCAGTAAAGTCGTTGTCGGCTGTGCGGC 15159
Query 14377 GCACCGACGCCCGCAGCGCATAAATCTGCCGCTGCGCTGGCGTATCCCGCGTTTTCCAAG 14436
||||||| |||||||||||||||||| |||||| ||||||| | | ||||| |
Sbjct 15160 GCACCGAAGCCCGCAGCGCATAAATCAAGCGCTGCTGTGGCGTAGTTCTCTGCTTCCAGG 15219
Query 14437 TCAGTTTGTACAATGTCGAGCCAACCGAGGCCGTCCTTGCTTGAAACCTGCTCACCAAAG 14496
||| | ||||||| |||||||||| |||| ||||| ||||| ||||||||||||||||
Sbjct 15220 TCAATCTGTACAAGGTCGAGCCAAGCGAGTCCGTCAGGGCTTGCAACCTGCTCACCAAAG 15279
Query 14497 ACGACGCTAGGGCTGCACTGGCTGATGAGATGGAAGAATGCCGGCCACAGGTGCCGCTCG 14556
| ||| ||| ||||||| |||||| |||||||| || ||||| | | ||||||||
Sbjct 15280 ATAACGTCAGGTTTGCACTGCTGGATGAGGTGGAAGAACGCGGGCCATAAGCGCCGCTCG 15339
Query 14557 TCAGCAACCCCTGCGCCTTTGCCTGCCGCGCTGAAAGGCTGGCAAGGGCAAGATCCGGTC 14616
||||||| || || |||||||||| ||||||||||||||| || ||| || |||
Sbjct 15340 TCAGCAAATCCCTTTCCCTTGCCTGCCGGGCTGAAAGGCTGGCACGGACAACTGCCTGTC 15399
Query 14617 CAGACCGGTCGATCATCCGGCCATCCTGCGCGGCGCAGGGCGAGCGACCATACTCCAATT 14676
|| || ||| |||||| ||||| | | ||||||||| ||||| || |||
Sbjct 15400 CACACGGGTTTATCATCGGGCCAGCACACTTTTCGCAGGGCGTATGACCAGGTGCCGATT 15459
Query 14677 CCGGCGAAGAAGTGGCACTGGGT-AAATTCGGTGAGTTCATTTGGTGTTATATCCTCGAT 14735
||||||||||| || |||||||| | || || | |||| ||| | || ||||||||
Sbjct 15460 CCGGCGAAGAAATGACACTGGGTGTAGCTCTGT-AACTCATCGGGTTTAATCTCCTCGAT 15518
Query 14736 CGATCGTTCGTCAACAATACCAGGGGCGATATGCCCTTCTGCGATAAGATTACGCAGCCA 14795
|| ||||| || ||| |||||| || |||||||| | || || || || ||||||||
Sbjct 15519 TGAACGTTCATCGACATCACCAGGCGCAATATGCCCGGCGGCCATCAGGTTTCGCAGCCA 15578
Query 14796 TTGCGCGGCGTAGGGGTCAATTTCATTGTAATAGGC 14831
||| | | ||||||||| | || || || ||||
Sbjct 15579 CTGCCCCACATAGGGGTCAGTGTCGTTATACCAGGC 15614
Score = 187 bits (206), Expect = 7e-43
Identities = 151/183 (83%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 13895 GCGCACAGATGGCGTTCCCGTAGGCGCGCAATCGTCCCACTCGGGAGGTAATCCCATTAG 13954
||||| || || || ||||||||||||| ||||||||||| | ||||||||||| ||
Sbjct 14747 GCGCATTGAGGGTATTACCGTAGGCGCGCAGTCGTCCCACTCTGTTGGTAATCCCATCAG 14806
Query 13955 CCAACGGGAATGTGCCGGGTTCAACTGGCCGCCACTTTCCATCCCGGCAGCTGAGCCAGT 14014
||| |||| |||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 14807 CCAGCGGGCGTGTGCCGGGTTCAACTGGCCGCCATTTTCCATCCCGGCAGCAGAGCCAGT 14866
Query 14015 CAGAATCTCGCCAGTGGCCGTTAGTCGGCCCGGCAGCGTCATTTGTGACCACCCCGGCAG 14074
||| ||||||||| ||||| |||||| | || |||||||| | |||| || | |||
Sbjct 14867 CAGCCTCTCGCCAGAAGCCGTGAGTCGGACAGGTGGCGTCATTGGCGACCCTCCTGTCAG 14926
Query 14075 GCA 14077
||
Sbjct 14927 ACA 14929
>seq10505
Length=1270
Score = 183 bits (202), Expect = 8e-42
Identities = 221/294 (75%), Gaps = 10/294 (3%)
Strand=Plus/Minus
Query 14317 CCTTCCTGTCGCTGGTGGTTGGCGTCGGCCACCCAGTACAATCGCTGTCGGATGTGCGGC 14376
|||||| ||| | ||||| ||||| ||||||||||||| || | ||||| |||||
Sbjct 289 CCTTCCCGTCCCGCGTGGTCGGCGTAGGCCACCCAGTACGCCCGGTCGCGGATATGCGGG 230
Query 14377 GCACCGACGCCCGCAG-CGCATAAATCTGCCGCTGCGCTGGCGTATCCCGCGTTTTCCAA 14435
|||||||||||||||| || | | | | | || |||||| || || |||||
Sbjct 229 GCACCGACGCCCGCAGACGGAAACGGCACACACC-CGAAGGCGTAGTCCACGGCTTCCAG 171
Query 14436 GTCAGTTTGTACAATGTCGAGCCAACCGAGGCCGTCCT---TGCTTGAAACCTGCTCACC 14492
||||| ||||||| ||||| ||| |||| | | |||||| |||||| |||||
Sbjct 170 GTCAGCCTGTACAAGGTCGAACCA---GAGGTTTGCATGGCTGCTTGCAACCTGTTCACC 114
Query 14493 AAAGACG-ACGCTAGGGCTGCACTGGCTGATGAGATGGAAGAATGCCGGCCACAGGTGCC 14551
||| ||| || | ||||| ||||||||||||||| | || || ||||| || ||||
Sbjct 113 AAAAACGTACTC-AGGGCGGCACTGGCTGATGAGCCAGTGAAAAGCGGGCCAGAGATGCC 55
Query 14552 GCTCGTCAGCAACCCCTGCGCCTTTGCCTGCCGCGCTGAAAGGCTGGCAAGGGC 14605
|||||||| || ||| |||| |||||||||||||||||||||||||| ||||
Sbjct 54 GCTCGTCATAAAACCCGCCGCCCTTGCCTGCCGCGCTGAAAGGCTGGCAGGGGC 1
Score = 165 bits (182), Expect = 2e-36
Identities = 118/136 (87%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13902 GATGGCGTTCCCGTAGGCGCGCAATCGTCCCACTCGGGAGGTAATCCCATTAGCCAACGG 13961
||| ||||| ||||||||||||| ||||||||| ||| ||||| ||||| ||||| |||
Sbjct 500 GATAGCGTTTCCGTAGGCGCGCAGTCGTCCCACGCGGTTGGTAACCCCATAAGCCAGCGG 441
Query 13962 GAATGTGCCGGGTTCAACTGGCCGCCACTTTCCATCCCGGCAGCTGAGCCAGTCAGAATC 14021
||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||
Sbjct 440 GAATGCGCCGGGTTCAACTGGCCGCCACTTTTCATCCCGGCACAGGAGCCAGTCAGCCTC 381
Query 14022 TCGCCAGTGGCCGTTA 14037
||||||| |||||||
Sbjct 380 TCGCCAGAAGCCGTTA 365
>seq2192
Length=16777
Score = 178 bits (196), Expect = 4e-40
Identities = 219/293 (75%), Gaps = 10/293 (3%)
Strand=Plus/Plus
Query 14317 CCTTCCTGTCGCTGGTGGTTGGCGTCGGCCACCCAGTACAATCGCTGTCGGATGTGCGGC 14376
|||||| ||| | ||||| ||||| ||||||||||||| || | ||||| |||||
Sbjct 16490 CCTTCCCGTCCCGCGTGGTCGGCGTAGGCCACCCAGTACGCCCGGTCGCGGATATGCGGG 16549
Query 14377 GCACCGACGCCCGCAG-CGCATAAATCTGCCGCTGCGCTGGCGTATCCCGCGTTTTCCAA 14435
|||||||||||||||| || | | | | | || |||||| || || |||||
Sbjct 16550 GCACCGACGCCCGCAGACGGAAACGGCACACACC-CGAAGGCGTAGTCCACGGCTTCCAG 16608
Query 14436 GTCAGTTTGTACAATGTCGAGCCAACCGAGGCCGTCCT---TGCTTGAAACCTGCTCACC 14492
||||| ||||||| ||||| ||| |||| | | |||||| |||||| |||||
Sbjct 16609 GTCAGCCTGTACAAGGTCGAACCA---GAGGTTTGCATGGCTGCTTGCAACCTGTTCACC 16665
Query 14493 AAAGACG-ACGCTAGGGCTGCACTGGCTGATGAGATGGAAGAATGCCGGCCACAGGTGCC 14551
||| ||| || | ||||| ||||||||||||||| | || || ||||| || ||||
Sbjct 16666 AAAAACGTACTC-AGGGCGGCACTGGCTGATGAGCCAGTGAAAAGCGGGCCAGAGATGCC 16724
Query 14552 GCTCGTCAGCAACCCCTGCGCCTTTGCCTGCCGCGCTGAAAGGCTGGCAAGGG 14604
|||||||| || ||| |||| |||||||| ||||||||||||||||| |||
Sbjct 16725 GCTCGTCATAAAACCCGCCGCCCTTGCCTGCTGCGCTGAAAGGCTGGCAGGGG 16777
Score = 165 bits (182), Expect = 2e-36
Identities = 118/136 (87%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 13902 GATGGCGTTCCCGTAGGCGCGCAATCGTCCCACTCGGGAGGTAATCCCATTAGCCAACGG 13961
||| ||||| ||||||||||||| ||||||||| ||| ||||| ||||| ||||| |||
Sbjct 16279 GATAGCGTTTCCGTAGGCGCGCAGTCGTCCCACGCGGTTGGTAACCCCATAAGCCAGCGG 16338
Query 13962 GAATGTGCCGGGTTCAACTGGCCGCCACTTTCCATCCCGGCAGCTGAGCCAGTCAGAATC 14021
||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||
Sbjct 16339 GAATGCGCCGGGTTCAACTGGCCGCCACTTTTCATCCCGGCACAGGAGCCAGTCAGCCTC 16398
Query 14022 TCGCCAGTGGCCGTTA 14037
||||||| |||||||
Sbjct 16399 TCGCCAGAAGCCGTTA 16414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137505791738526
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |