Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_023690.1 Length=110569 Score E Sequences producing significant alignments: (Bits) Value seq3339 104 2e-17 >seq3339 Length=8650 Score = 104 bits (114), Expect = 2e-17 Identities = 130/176 (74%), Gaps = 3/176 (2%) Strand=Plus/Minus Query 97132 TTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 97191 |||| ||||||||||| |||| ||||||||||| |||||||| |||||||| || | Sbjct 6627 TTGGCCTTGATAAGGCCAGTGATAACATCCACGGAAGGCCGCTGAGTCGCCAGCACCAAG 6568 Query 97192 TGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTC 97251 || |||||||| |||||||| ||||| || | ||| | || | || || |||| Sbjct 6567 TGGATACCGGCCGCGCGCGCTTTCTGCGCTAGGCGAGCGATCAGCTCTTCCAC--CTTTT 6510 Query 97252 TTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGG 97307 | | ||| ||||||| || || || | ||| || |||| |||||||| |||| Sbjct 6509 TGCCAACCG-CCATCATCAGATCGGCAAATTCATCCACCATCACCACGATAAAGGG 6455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353624714450210