Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_023717.1
Length=151924
Score E
Sequences producing significant alignments: (Bits) Value
seq2248 96.9 3e-15
>seq2248
Length=16282
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 8/192 (4%)
Strand=Plus/Plus
Query 123352 GCCGAGGTTGATTGCAGACAGCGTACAAAGTGCAATCTCGCCATCGTCCTCAGGATTTTT 123411
||| ||||||| || || || || || || || ||||| || | || || ||
Sbjct 895 GCCAAGGTTGAACGCGGAGAGGGTGCAGAGCGCGATCTCACCTTTTTCGTCG------TT 948
Query 123412 GAGGTCATTGATCGCGTGAGTAGGCAGGGCAATCTCCATGCACAGGTTGGACTGTTTCAC 123471
|| ||| | | | ||| || ||||| ||||| |||| ||||||||||| ||| |||
Sbjct 949 GACGTCTTCCAGAGGGTGGGTTGGCAGCGCAATTTCCAGGCACAGGTTGGGCTGACGCAC 1008
Query 123472 CGGGGCCA-GTTCTGGATTGAACGGGCTGTTGGTGTTGCAGTGGTCAACGTGCTGAATGT 123530
||| || | | || || | |||||||||| ||||||||| || || || || |||||||
Sbjct 1009 CGGTGCGATGGTC-GGTTCAAACGGGCTGTGGGTGTTGCAATGATCGACATGTTGAATGT 1067
Query 123531 AGATGCGTCCTG 123542
|||| || ||||
Sbjct 1068 AGATACGGCCTG 1079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 485928331771680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |