Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq2248 96.9 3e-15 >seq2248 Length=16282 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 123352 GCCGAGGTTGATTGCAGACAGCGTACAAAGTGCAATCTCGCCATCGTCCTCAGGATTTTT 123411 ||| ||||||| || || || || || || || ||||| || | || || || Sbjct 895 GCCAAGGTTGAACGCGGAGAGGGTGCAGAGCGCGATCTCACCTTTTTCGTCG------TT 948 Query 123412 GAGGTCATTGATCGCGTGAGTAGGCAGGGCAATCTCCATGCACAGGTTGGACTGTTTCAC 123471 || ||| | | | ||| || ||||| ||||| |||| ||||||||||| ||| ||| Sbjct 949 GACGTCTTCCAGAGGGTGGGTTGGCAGCGCAATTTCCAGGCACAGGTTGGGCTGACGCAC 1008 Query 123472 CGGGGCCA-GTTCTGGATTGAACGGGCTGTTGGTGTTGCAGTGGTCAACGTGCTGAATGT 123530 ||| || | | || || | |||||||||| ||||||||| || || || || ||||||| Sbjct 1009 CGGTGCGATGGTC-GGTTCAAACGGGCTGTGGGTGTTGCAATGATCGACATGTTGAATGT 1067 Query 123531 AGATGCGTCCTG 123542 |||| || |||| Sbjct 1068 AGATACGGCCTG 1079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485928331771680