Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_023841.1 Length=37328 Score E Sequences producing significant alignments: (Bits) Value seq10505 152 1e-32 seq2192 152 1e-32 seq1601 122 2e-23 >seq10505 Length=1270 Score = 152 bits (168), Expect = 1e-32 Identities = 136/169 (80%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 31176 CGGTTAACGGCGTCTGGCGAGATGCTGACTGGCTCTGGTGCCGGGATGAAAAGTGGCGGC 31235 ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 361 CGGTTAACGGCTTCTGGCGAGAGGCTGACTGGCTCCTGTGCCGGGATGAAAAGTGGCGGC 420 Query 31236 CGGTTGAACCCGGCCTTGAGCCGCTGGTTGATGGGGCTCCCGCCCGTGTGGGACGCCTGC 31295 | |||||||||||| ||||||| | |||||| | || ||| |||||||| |||| Sbjct 421 CAGTTGAACCCGGCGCATTCCCGCTGGCTTATGGGGTTACCAACCGCGTGGGACGACTGC 480 Query 31296 GCGGATACGGCAACGCAATCATTGCCGAGCAGGCGGC---GGCGTTCAT 31341 ||| ||||| ||||| |||| || | ||||||| |||||||| Sbjct 481 GCGCCTACGGAAACGCTATCA---ACGTGGAGGCGGCAAAAGCGTTCAT 526 >seq2192 Length=16777 Score = 152 bits (168), Expect = 1e-32 Identities = 136/169 (80%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 31176 CGGTTAACGGCGTCTGGCGAGATGCTGACTGGCTCTGGTGCCGGGATGAAAAGTGGCGGC 31235 ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 16418 CGGTTAACGGCTTCTGGCGAGAGGCTGACTGGCTCCTGTGCCGGGATGAAAAGTGGCGGC 16359 Query 31236 CGGTTGAACCCGGCCTTGAGCCGCTGGTTGATGGGGCTCCCGCCCGTGTGGGACGCCTGC 31295 | |||||||||||| ||||||| | |||||| | || ||| |||||||| |||| Sbjct 16358 CAGTTGAACCCGGCGCATTCCCGCTGGCTTATGGGGTTACCAACCGCGTGGGACGACTGC 16299 Query 31296 GCGGATACGGCAACGCAATCATTGCCGAGCAGGCGGC---GGCGTTCAT 31341 ||| ||||| ||||| |||| || | ||||||| |||||||| Sbjct 16298 GCGCCTACGGAAACGCTATCA---ACGTGGAGGCGGCAAAAGCGTTCAT 16253 >seq1601 Length=30922 Score = 122 bits (134), Expect = 2e-23 Identities = 103/127 (81%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 31182 ACGGCGTCTGGCGAGATGCTGACTGGCTCTGGTGCCGGGATGAAAAGTGGCGGCCGGTTG 31241 ||||| |||||||||| |||||||||||||| |||||||||| ||| |||||||| |||| Sbjct 14887 ACGGCTTCTGGCGAGAGGCTGACTGGCTCTGCTGCCGGGATGGAAAATGGCGGCCAGTTG 14828 Query 31242 AACCCGGCCTTGAGCCGCTGGTTGATGGGGCTCCCGCCCGTGTGGGACGCCTGCGCGGAT 31301 |||||||| ||||||| ||||||| | || | | |||||||| ||||||| | Sbjct 14827 AACCCGGCACACGCCCGCTGGCTGATGGGATTACCAACAGAGTGGGACGACTGCGCGCCT 14768 Query 31302 ACGGCAA 31308 |||| || Sbjct 14767 ACGGTAA 14761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119304566740260