Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq152 100 5e-16
seq57 91.5 3e-13
>seq152
Length=1173123
Score = 100 bits (110), Expect = 5e-16
Identities = 96/123 (78%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 183009 AACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCA 183068
||| |||||| ||| |||||| | | ||||| ||| || ||| ||||| ||||||||
Sbjct 624788 AACGCATGACGATCTGTGGAATTCGGCGCAAATCCAGCTGGTGAAGGAAGGGAAAATGCA 624729
Query 183069 TAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGA 183128
| | |||||||| ||||||||||| || ||||||||||| ||||| | |||||| ||
Sbjct 624728 TGGATTTTTACGGATGTACTGGGCGAAGAAGATACTTGAGTGGACGTCCAGTCCGGAGGA 624669
Query 183129 TGC 183131
||
Sbjct 624668 AGC 624666
>seq57
Length=2082711
Score = 91.5 bits (100), Expect = 3e-13
Identities = 97/130 (75%), Gaps = 11/130 (8%)
Strand=Plus/Plus
Query 81653 TCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAACA-----------AAG 81701
|| ||||| || ||||||||||| ||||||| || ||||| ||| ||
Sbjct 1618877 TCTTTCTGAATGTTATAATCAGAAAGAGTTCGACCATCTTCCAACTGTTTCCCAGCGAAA 1618936
Query 81702 ATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATATTT 81761
|| | ||||| ||| | ||| | ||| ||||||||||||||||||| ||||||| ||||
Sbjct 1618937 ATCAACCTTTGCTGATCGGGAGGGATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTT 1618996
Query 81762 TCAATCGTAT 81771
||||| ||||
Sbjct 1618997 TCAATTGTAT 1619006
Score = 87.8 bits (96), Expect = 3e-12
Identities = 96/130 (74%), Gaps = 11/130 (8%)
Strand=Plus/Plus
Query 81653 TCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAAC-----------AAAG 81701
|||||||||||||| ||||| ||||| || | || ||||| ||| |||
Sbjct 1621157 TCCTTCTGTATATTGTAATCGGATAGGGTACGACCATCTTCCAACTGCTTTCCAGCAAAA 1621216
Query 81702 ATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATATTT 81761
|||| || ||| ||| | ||| | ||| |||||||||||||||| || || |||| |||
Sbjct 1621217 ATTAATCGTTGCTGATCAGGAGGGATTCCTTCCTTATCTTGAATTTTAGCCTTTACGTTT 1621276
Query 81762 TCAATCGTAT 81771
||||| ||||
Sbjct 1621277 TCAATAGTAT 1621286
Score = 86.0 bits (94), Expect = 1e-11
Identities = 100/137 (73%), Gaps = 11/137 (8%)
Strand=Plus/Plus
Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAACA----- 81698
|||||| |||| ||||| ||||||||||| || ||||| | | |||||||||
Sbjct 1620920 AGAGTAGATTCTTTCTGAATATTATAATCTGAAAGAGTGCGGCCATCTTCTAACTGCTTT 1620979
Query 81699 ------AAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752
||||||| ||||||||| |||| | ||| |||| ||||||||||| || ||
Sbjct 1620980 CCGGCGAAGATTAATCTTTGTTGGTCTGGCGGAATTCCTTCTTTATCTTGAATTTTAGCC 1621039
Query 81753 TTTATATTTTCAATCGT 81769
|| | |||||| || ||
Sbjct 1621040 TTAACATTTTCGATTGT 1621056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903224453612320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |