Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq21 100 4e-16
seq349 95.1 2e-14
seq125 95.1 2e-14
seq75 95.1 2e-14
seq42 95.1 2e-14
>seq21
Length=2976947
Score = 100 bits (110), Expect = 4e-16
Identities = 69/77 (90%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 11725 CCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTC 11783
||||||||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||
Sbjct 1416585 CCCAGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 1416644
Query 11784 GATTCCCCGACGAGGAG 11800
||||||||| || ||||
Sbjct 1416645 GATTCCCCGCCGGGGAG 1416661
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 1417691 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 1417750
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 1417751 TCCCCGCCGGGGAGG 1417765
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 1417992 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 1418051
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 1418052 TCCCCGCCGGGGAGG 1418066
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1416590 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1416649
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1416650 CCCGCCGGGGAG 1416661
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 1416868 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 1416927
Query 11787 TCCCCGACGAGGAG 11800
|||||| || ||||
Sbjct 1416928 TCCCCGCCGGGGAG 1416941
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1416870 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1416929
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1416930 CCCGCCGGGGAG 1416941
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 1417142 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 1417201
Query 11787 TCCCCGACGAGGAG 11800
|||||| || ||||
Sbjct 1417202 TCCCCGCCGGGGAG 1417215
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1417144 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1417203
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1417204 CCCGCCGGGGAG 1417215
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 1417416 AGTCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 1417475
Query 11787 TCCCCGACGAGGAG 11800
|||||| || ||||
Sbjct 1417476 TCCCCGCCGGGGAG 1417489
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1417418 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1417477
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1417478 CCCGCCGGGGAG 1417489
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1417693 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1417752
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1417753 CCCGCCGGGGAG 1417764
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1417994 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1418053
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 1418054 CCCGCCGGGGAG 1418065
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1416661 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1416602
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 1416601 TACTACCGAGGA 1416590
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1416941 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1416882
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 1416881 TACTACCGAGGACTT 1416867
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1417215 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1417156
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 1417155 TACTACCGAGGACTT 1417141
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1417489 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1417430
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 1417429 TACTACCGAGGACTT 1417415
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1417764 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1417705
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 1417704 TACTACCGAGGACTT 1417690
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 1418065 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1418006
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 1418005 TACTACCGAGGACTT 1417991
>seq349
Length=551398
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 349620 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 349561
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 349560 CCCGCCGGGGAG 349549
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 349621 GTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 349562
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 349561 CCCCGCCGGGGAG 349549
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 349549 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 349608
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 349609 TACTACCGAGGA 349620
>seq125
Length=1349911
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 572734 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 572675
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 572674 CCCGCCGGGGAG 572663
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 573635 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 573694
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 573695 CCCGCCGGGGAG 573706
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 572735 GTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 572676
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 572675 CCCCGCCGGGGAG 572663
Score = 93.3 bits (102), Expect = 6e-14
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 573706 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 573647
Query 139413 TACTAACGAGGATTT-TGGTA 139432
||||| ||||||||| |||||
Sbjct 573646 TACTACCGAGGATTTGTGGTA 573626
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 573635 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 573694
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 573695 CCCGCCGGGGAGG 573707
Score = 89.7 bits (98), Expect = 7e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410
|||||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||
Sbjct 572661 AACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 572720
Query 139411 TATACTAACGAGGA 139424
||||||| ||||||
Sbjct 572721 TATACTACCGAGGA 572734
>seq75
Length=1867704
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 935420 AGTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 935361
Query 11787 TCCCCGACGAGGAG 11800
|||||| || ||||
Sbjct 935360 TCCCCGCCGGGGAG 935347
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 935418 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 935359
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 935358 CCCGCCGGGGAG 935347
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 935347 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 935406
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 935407 TACTACCGAGGA 935418
>seq42
Length=2339945
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 2128010 AGTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 2128069
Query 11787 TCCCCGACGAGGAG 11800
|||||| || ||||
Sbjct 2128070 TCCCCGCCGGGGAG 2128083
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 2128012 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2128071
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 2128072 CCCGCCGGGGAG 2128083
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 2128083 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2128024
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 2128023 TACTACCGAGGACTT 2128009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652709848819280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |