Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_024451.1
Length=220222
Score E
Sequences producing significant alignments: (Bits) Value
seq7 95.1 2e-14
>seq7
Length=4372134
Score = 95.1 bits (104), Expect = 2e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 127474 ATATTTAGCAAAACCGTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTTA 127533
|| ||||| |||||| || ||| | |||||| ||||||| || | | ||| ||| | ||
Sbjct 4105892 ATTTTTAGGAAAACCATCTGATATGTGGGCTTTAGGAGTGGTTCTGTTTACTATGTTGTA 4105951
Query 127534 CGGACAATTTCCATTTTATGACTCTAAACCAAAAGAATTGTTTAGAAAAATTAAAGC 127590
|| || ||||||||||||||||| | || | | ||||||||| |||||||||||
Sbjct 4105952 TGGTCAGTTTCCATTTTATGACTCCAGTCCTACACAATTGTTTAATAAAATTAAAGC 4106008
Score = 86.0 bits (94), Expect = 9e-12
Identities = 97/129 (75%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 140491 AAACTAGTAAACTATCTAATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTTT 140550
||| |||| | || | ||||| ||| | |||||||| ||| ||||||||| || | |
Sbjct 4105059 AAAGTAGTGA--TAACAAATTTCTGTCTTGGAAAACATCTTGGAAGTGAAAAAGACTTAT 4105116
Query 140551 TAAAAGATCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCAT 140610
|||||||||| | || ||||| |||||||| ||||| ||||| | | || || ||||
Sbjct 4105117 TAAAAGATCAGAGGGGTTCTCCAGCATATATATCTCCTGATGTACTGTGTGGAAAGCCAT 4105176
Query 140611 ATTTAGGTA 140619
|| | ||||
Sbjct 4105177 ATGTTGGTA 4105185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 704436754010640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |