Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 2e-14 >seq7 Length=4372134 Score = 95.1 bits (104), Expect = 2e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 127474 ATATTTAGCAAAACCGTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTTA 127533 || ||||| |||||| || ||| | |||||| ||||||| || | | ||| ||| | || Sbjct 4105892 ATTTTTAGGAAAACCATCTGATATGTGGGCTTTAGGAGTGGTTCTGTTTACTATGTTGTA 4105951 Query 127534 CGGACAATTTCCATTTTATGACTCTAAACCAAAAGAATTGTTTAGAAAAATTAAAGC 127590 || || ||||||||||||||||| | || | | ||||||||| ||||||||||| Sbjct 4105952 TGGTCAGTTTCCATTTTATGACTCCAGTCCTACACAATTGTTTAATAAAATTAAAGC 4106008 Score = 86.0 bits (94), Expect = 9e-12 Identities = 97/129 (75%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 140491 AAACTAGTAAACTATCTAATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTTT 140550 ||| |||| | || | ||||| ||| | |||||||| ||| ||||||||| || | | Sbjct 4105059 AAAGTAGTGA--TAACAAATTTCTGTCTTGGAAAACATCTTGGAAGTGAAAAAGACTTAT 4105116 Query 140551 TAAAAGATCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCAT 140610 |||||||||| | || ||||| |||||||| ||||| ||||| | | || || |||| Sbjct 4105117 TAAAAGATCAGAGGGGTTCTCCAGCATATATATCTCCTGATGTACTGTGTGGAAAGCCAT 4105176 Query 140611 ATTTAGGTA 140619 || | |||| Sbjct 4105177 ATGTTGGTA 4105185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704436754010640