Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08]
16,537 sequences; 706,824,083 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq57 104 2e-17
seq126 98.7 1e-15
seq504 89.7 5e-13
>seq57
Length=2082711
Score = 104 bits (114), Expect = 2e-17
Identities = 151/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||||||||| || || ||||||||||| | || | | | || || |
Sbjct 1619090 AAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCA-TCTTCCAA 1619148
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || |||| || |||||||| || || ||||| |||||||| || |||
Sbjct 1619149 CTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGAT 1619208
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| | | | |||| || || | |||||| || || | || | ||||| |
Sbjct 1619209 -TTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTTC 1619267
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||||||||| |||||||| |||||
Sbjct 1619268 CAGTCAGAGTTTTCACGAAAATTTGCAT 1619295
Score = 100 bits (110), Expect = 3e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | |||||||||||||||||||||||||| || ||| ||| | || || |
Sbjct 1620230 AAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCA-TCTTCCAA 1620288
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| || | || | || ||| || || || || || ||||| || || |||
Sbjct 1620289 CTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTATC-TTGAA 1620347
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || || | | |||| || || | || || || || | ||||| |||||| |
Sbjct 1620348 TTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGGTTTTTC 1620407
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| | ||||| ||||| ||||||||
Sbjct 1620408 CGGTTAACGTTTTGACGAATATCTGCAT 1620435
Score = 100 bits (110), Expect = 3e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||||||||| || || ||||||||||| | || | | | || || |
Sbjct 1620458 AAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCA-TCTTCCAA 1620516
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || |||| || |||||||| || || ||||| |||||||| || |||
Sbjct 1620517 CTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGAT 1620576
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| | | |||| || || | ||||||||| || | || | ||||| |
Sbjct 1620577 -TTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTTC 1620635
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||||||||| || ||||| |||||
Sbjct 1620636 CAGTCAGAGTTTTCACAAAAATTTGCAT 1620663
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/209 (72%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512
||||| | |||||||| |||||||||||||||||| || | | |||| || || |
Sbjct 1621142 AAATGCAACGTGGACTCCTTCTGTATATTGTAATCGG--ATAGGGTACGACCATCTTCCA 1621199
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||| || || |||| | || ||||| || |||||||| |||||||| || |||
Sbjct 1621200 ACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAGGGATTCCTTCCTTATCT-TGA 1621258
Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631
||| || || | | |||| || || | ||||| || || | || | || ||
Sbjct 1621259 ATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAACTTCAAGAGTTATTGTCTTC 1621318
Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||| ||||||||||| ||||||||
Sbjct 1621319 CCCGTCAACGTTTTTACGAAGATCTGCAT 1621347
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||||||||| || || ||||||||||| | || | | | || || |
Sbjct 1619546 AAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCA-TCTTCTAA 1619604
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || |||| || |||||||| || || || || ||||| || || |||
Sbjct 1619605 CTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGGAT 1619664
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|| ||| | | ||| | || || | ||||| || || | || | ||||| ||
Sbjct 1619665 TTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTTTCC 1619724
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||||||||| || ||||| |||||
Sbjct 1619725 AGTCAGAGTTTTCACAAAAATTTGCAT 1619751
>seq126
Length=1333976
Score = 98.7 bits (108), Expect = 1e-15
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370
|||||||||||||| || || |||||||| | |||||||| || | || || |||||
Sbjct 1331901 GTAAACGGTTCAAATGATTCATTGTTGCCAAGTATCTGCGCTGTAGAAGCTGTAGGCATT 1331960
Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430
|||| |||| || || | || ||| | | ||||| ||||||| ||| | |
Sbjct 1331961 GGTGCTAGTAGCAAGGAATTTCTCAGACCATGTTCGGCAATTTTTCGCTTCAAAGCAGTC 1332020
Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTG 148474
||||||||||| | | ||||| || ||||||||||| |||||
Sbjct 1332021 CAGTCCCAGAGTGTGGTTGGTGTTACATTCCACATGTCATACTG 1332064
>seq504
Length=327254
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 133471 CTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAA 133529
||||||| |||||||||||| | ||| | | | || || ||||| ||||| || ||
Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCA-TCTTCTAGCTGTTTGCCAGCAAAA 214162
Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589
|| | | ||||| || ||||| || ||||| || || ||||||| ||| | |
Sbjct 214163 ATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTT 214222
Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649
|||| ||||| | ||| || || || | ||| | ||||| || |||| |||||| ||
Sbjct 214223 TCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACA 214282
Query 133650 AAAATCTGCAT 133660
||||| |||||
Sbjct 214283 AAAATTTGCAT 214293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483320870877880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |