Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq57 104 2e-17 seq126 98.7 1e-15 seq504 89.7 5e-13 >seq57 Length=2082711 Score = 104 bits (114), Expect = 2e-17 Identities = 151/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||||||||| || || ||||||||||| | || | | | || || | Sbjct 1619090 AAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCA-TCTTCCAA 1619148 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || |||| || |||||||| || || ||||| |||||||| || ||| Sbjct 1619149 CTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGAT 1619208 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| | | | |||| || || | |||||| || || | || | ||||| | Sbjct 1619209 -TTTGGCTTTAACATTTTCAATAGTATCAGAGGGCTCAACTTCAAGAGTAATTGTTTTTC 1619267 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||||||||| |||||||| ||||| Sbjct 1619268 CAGTCAGAGTTTTCACGAAAATTTGCAT 1619295 Score = 100 bits (110), Expect = 3e-16 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||||||||||||||||||||||| || ||| ||| | || || | Sbjct 1620230 AAATGCAACGTGGACTCTTTCTGTATATTGTAATCAGACAGTGTGCGACCA-TCTTCCAA 1620288 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | || | || ||| || || || || || ||||| || || ||| Sbjct 1620289 CTGCTTGCCTGCAAAGATCAACCTCTGTTGATCTGGTGGAATACCTTCTTTATC-TTGAA 1620347 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || || | | |||| || || | || || || || | ||||| |||||| | Sbjct 1620348 TTTTAGCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCTAAGGTGATGGTTTTTC 1620407 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| | ||||| ||||| |||||||| Sbjct 1620408 CGGTTAACGTTTTGACGAATATCTGCAT 1620435 Score = 100 bits (110), Expect = 3e-16 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||||||||| || || ||||||||||| | || | | | || || | Sbjct 1620458 AAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCA-TCTTCCAA 1620516 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || |||| || |||||||| || || ||||| |||||||| || ||| Sbjct 1620517 CTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTATCCTGGAT 1620576 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| | | |||| || || | ||||||||| || | || | ||||| | Sbjct 1620577 -TTTGGCTTTTACATTTTCAATAGTATCAGAGGGCTCCACTTCAAGAGTAATTGTTTTTC 1620635 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||||||||| || ||||| ||||| Sbjct 1620636 CAGTCAGAGTTTTCACAAAAATTTGCAT 1620663 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/209 (72%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512 ||||| | |||||||| |||||||||||||||||| || | | |||| || || | Sbjct 1621142 AAATGCAACGTGGACTCCTTCTGTATATTGTAATCGG--ATAGGGTACGACCATCTTCCA 1621199 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||| || || |||| | || ||||| || |||||||| |||||||| || ||| Sbjct 1621200 ACTGCTTTCCAGCAAAAATTAATCGTTGCTGATCAGGAGGGATTCCTTCCTTATCT-TGA 1621258 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || || | | |||| || || | ||||| || || | || | || || Sbjct 1621259 ATTTTAGCCTTTACGTTTTCAATAGTATCTGAAGGCTCAACTTCAAGAGTTATTGTCTTC 1621318 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||| ||||||||||| |||||||| Sbjct 1621319 CCCGTCAACGTTTTTACGAAGATCTGCAT 1621347 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||||||||| || || ||||||||||| | || | | | || || | Sbjct 1619546 AAATGAAGGGTGGACTCCTTTTGAATATTGTAATCAGATAGAGTTCGGCCA-TCTTCTAA 1619604 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || |||| || |||||||| || || || || ||||| || || ||| Sbjct 1619605 CTGCTTTCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGGAT 1619664 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||| | || || | ||||| || || | || | ||||| || Sbjct 1619665 TTTAGCCTTTACGTTCTCTATTGTATCAGACGGCTCAACTTCAAGAGTAATAGTTTTTCC 1619724 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||||||||| || ||||| ||||| Sbjct 1619725 AGTCAGAGTTTTCACAAAAATTTGCAT 1619751 >seq126 Length=1333976 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370 |||||||||||||| || || |||||||| | |||||||| || | || || ||||| Sbjct 1331901 GTAAACGGTTCAAATGATTCATTGTTGCCAAGTATCTGCGCTGTAGAAGCTGTAGGCATT 1331960 Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430 |||| |||| || || | || ||| | | ||||| ||||||| ||| | | Sbjct 1331961 GGTGCTAGTAGCAAGGAATTTCTCAGACCATGTTCGGCAATTTTTCGCTTCAAAGCAGTC 1332020 Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTG 148474 ||||||||||| | | ||||| || ||||||||||| ||||| Sbjct 1332021 CAGTCCCAGAGTGTGGTTGGTGTTACATTCCACATGTCATACTG 1332064 >seq504 Length=327254 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 133471 CTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAA 133529 ||||||| |||||||||||| | ||| | | | || || ||||| ||||| || || Sbjct 214104 CTTTCTGGATATTGTAATCGGAAAGGGTGCGTCCA-TCTTCTAGCTGTTTGCCAGCAAAA 214162 Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 || | | ||||| || ||||| || ||||| || || ||||||| ||| | | Sbjct 214163 ATCAATCTTTGCTGATCTGGAGGAATTCCTTCTTTATCTTGGATCTTTGCCTTAACATTT 214222 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 |||| ||||| | ||| || || || | ||| | ||||| || |||| |||||| || Sbjct 214223 TCAATTGTGTCTGAGGGTTCAACCTCAAGGGTAATTGTTTTACCCGTCAAAGTTTTCACA 214282 Query 133650 AAAATCTGCAT 133660 ||||| ||||| Sbjct 214283 AAAATTTGCAT 214293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483320870877880