Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodnius_20prolixus_20[genbank_20GCA_5F000181055.3_202015-04-08] 16,537 sequences; 706,824,083 total letters Query= NC_024783.1 Length=44332 Score E Sequences producing significant alignments: (Bits) Value seq1577 86.0 2e-12 >seq1577 Length=31499 Score = 86.0 bits (94), Expect = 2e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 28724 TGAACCAGCGGTCGGTAAATGCCTTATAGCTACTGCCGAGGCGTTCGCCTCCGTCGACAA 28783 |||||||||| ||||||||| || | | || ||||| | ||| ||||||| Sbjct 18212 TGAACCAGCGCGAGGTAAATGCGCCGTATGTGCGCCCCAGGCGCTGGCCCTGATCGACAA 18271 Query 28784 ACCACGTCTGACCCCATAAGTCTTTAAGCCCGTTTGGCGCTGGTGTGCCGGTAAGGTTAA 28843 |||||| || ||||| | |||| || |||||||| ||||| |||||||| || || Sbjct 18272 ACCACGCTTGCCCCCACAGGTCTACCAGACCGTTTGGTGCTGGCGTGCCGGTGAGATTGC 18331 Query 28844 TCCAGCGCTTGACGTGTTTATGTGC 28868 |||||| | ||| || |||||||| Sbjct 18332 CCCAGCGGTGGACATGATTATGTGC 18356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141712965384636